RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 FOXP1Q9H334 677 aaPredicted RBP14.67□□□□□ -0.06
TNFRSF1A-215ENST00000543359 TTC12Q9H892 705 aaPredicted RBP14.67□□□□□ -0.06
TNFRSF1A-215ENST00000543359 ATP6V0A4Q9HBG4 840 aa14.67□□□□□ -0.06
TNFRSF1A-215ENST00000543359 XPNPEP1Q9NQW7 623 aa14.67□□□□□ -0.06
TNFRSF1A-215ENST00000543359 TYW1Q9NV66 732 aaKnown RBP14.67□□□□□ -0.06
TNFRSF1A-215ENST00000543359 RNF216Q9NWF9 866 aaPredicted RBP14.67□□□□□ -0.06
TNFRSF1A-215ENST00000543359 PLXNA4Q9HCM2 1894 aa14.67□□□□□ -0.06
TNFRSF1A-215ENST00000543359 SPATA31C1P0DKV0 1188 aa14.66□□□□□ -0.06
TNFRSF1A-215ENST00000543359 ZSCAN20P17040 1043 aaPredicted RBP14.66□□□□□ -0.06
TNFRSF1A-215ENST00000543359 TXKP42681 527 aa14.66□□□□□ -0.06
TNFRSF1A-215ENST00000543359 HMGN5P82970 282 aaKnown RBP14.66□□□□□ -0.06
TNFRSF1A-215ENST00000543359 HYAL1Q12794 435 aa14.66□□□□□ -0.06
TNFRSF1A-215ENST00000543359 CLLU1OSQ5K130 101 aa14.66□□□□□ -0.06
TNFRSF1A-215ENST00000543359 TPH2Q8IWU9 490 aa14.66□□□□□ -0.06
TNFRSF1A-215ENST00000543359 C4orf32Q8N8J7 132 aa14.66□□□□□ -0.06
TNFRSF1A-215ENST00000543359 TMEM143Q96AN5 459 aa14.66□□□□□ -0.06
TNFRSF1A-215ENST00000543359 PABPC5Q96DU9 382 aaKnown RBP14.66□□□□□ -0.06
TNFRSF1A-215ENST00000543359 TMEM117Q9H0C3 514 aa14.66□□□□□ -0.06
TNFRSF1A-215ENST00000543359 MINDY3Q9H8M7 445 aa14.66□□□□□ -0.06
TNFRSF1A-215ENST00000543359 CHST12Q9NRB3 414 aa14.66□□□□□ -0.06
TNFRSF1A-215ENST00000543359 COL4A3BPQ9Y5P4 624 aa14.66□□□□□ -0.06
TNFRSF1A-215ENST00000543359 CD2BP2O95400 341 aaKnown RBP14.65□□□□□ -0.06
TNFRSF1A-215ENST00000543359 EOMESO95936 686 aa14.65□□□□□ -0.06
TNFRSF1A-215ENST00000543359 KCNA5P22460 613 aa14.65□□□□□ -0.06
TNFRSF1A-215ENST00000543359 IRS1P35568 1242 aa14.65□□□□□ -0.06
TNFRSF1A-215ENST00000543359 RFC5P40937 340 aa14.65□□□□□ -0.06
TNFRSF1A-215ENST00000543359 PHKA2P46019 1235 aa14.65□□□□□ -0.06
TNFRSF1A-215ENST00000543359 LAMTOR4Q0VGL1 99 aa14.65□□□□□ -0.06
TNFRSF1A-215ENST00000543359 RABEP1Q15276 862 aa14.65□□□□□ -0.06
TNFRSF1A-215ENST00000543359 SAFBQ15424 915 aaKnown RBP eCLIP14.65□□□□□ -0.06
TNFRSF1A-215ENST00000543359 OTUD6AQ7L8S5 288 aa14.65□□□□□ -0.06
TNFRSF1A-215ENST00000543359 EXOC8Q8IYI6 725 aa14.65□□□□□ -0.06
TNFRSF1A-215ENST00000543359 SLC7A3Q8WY07 619 aa14.65□□□□□ -0.06
TNFRSF1A-215ENST00000543359 SCLT1Q96NL6 688 aa14.65□□□□□ -0.06
TNFRSF1A-215ENST00000543359 ANKEF1Q9NU02 776 aa14.65□□□□□ -0.06
TNFRSF1A-215ENST00000543359 A0A087WWV3 80 aa14.64□□□□□ -0.07
TNFRSF1A-215ENST00000543359 POTEMA6NI47 508 aa14.64□□□□□ -0.07
TNFRSF1A-215ENST00000543359 ATP2B1P20020 1258 aa14.64□□□□□ -0.07
TNFRSF1A-215ENST00000543359 HOXA11P31270 313 aaPredicted RBP14.64□□□□□ -0.07
TNFRSF1A-215ENST00000543359 MCM7P33993 719 aa14.64□□□□□ -0.07
TNFRSF1A-215ENST00000543359 GTF2F1P35269 517 aaKnown RBP eCLIP14.64□□□□□ -0.07
TNFRSF1A-215ENST00000543359 TOB1P50616 345 aaPredicted RBP14.64□□□□□ -0.07
TNFRSF1A-215ENST00000543359 POLGP54098 1239 aaPredicted RBP14.64□□□□□ -0.07
TNFRSF1A-215ENST00000543359 DLX2Q07687 328 aaPredicted RBP14.64□□□□□ -0.07
TNFRSF1A-215ENST00000543359 EMC2Q15006 297 aa14.64□□□□□ -0.07
TNFRSF1A-215ENST00000543359 XKR9Q5GH70 373 aa14.64□□□□□ -0.07
TNFRSF1A-215ENST00000543359 FERMT3Q86UX7 667 aa14.64□□□□□ -0.07
TNFRSF1A-215ENST00000543359 COLGALT1Q8NBJ5 622 aa14.64□□□□□ -0.07
TNFRSF1A-215ENST00000543359 POF1BQ8WVV4 589 aa14.64□□□□□ -0.07
TNFRSF1A-215ENST00000543359 NLRP4Q96MN2 994 aa14.64□□□□□ -0.07
TNFRSF1A-215ENST00000543359 BMP2KQ9NSY1 1161 aaPredicted RBP14.64□□□□□ -0.07
TNFRSF1A-215ENST00000543359 PCDHGC5Q9Y5F6 944 aa14.64□□□□□ -0.07
TNFRSF1A-215ENST00000543359 GRXCR2A6NFK2 248 aa14.63□□□□□ -0.07
TNFRSF1A-215ENST00000543359 MEIS3P2A8K0S8 358 aa14.63□□□□□ -0.07
TNFRSF1A-215ENST00000543359 H3BQ06 376 aaPredicted RBP14.63□□□□□ -0.07
TNFRSF1A-215ENST00000543359 HOXA2O43364 376 aa14.63□□□□□ -0.07
TNFRSF1A-215ENST00000543359 ZNF623O75123 536 aa14.63□□□□□ -0.07
TNFRSF1A-215ENST00000543359 SRGAP2CP0DJJ0 459 aa14.63□□□□□ -0.07
TNFRSF1A-215ENST00000543359 XRCC6P12956 609 aaKnown RBP eCLIP14.63□□□□□ -0.07
TNFRSF1A-215ENST00000543359 SFPQP23246 707 aaKnown RBP eCLIP14.63□□□□□ -0.07
TNFRSF1A-215ENST00000543359 U2AF2P26368 475 aaKnown RBP eCLIP14.63□□□□□ -0.07
TNFRSF1A-215ENST00000543359 ARL2P36404 184 aa14.63□□□□□ -0.07
TNFRSF1A-215ENST00000543359 RARRES1P49788 294 aa14.63□□□□□ -0.07
TNFRSF1A-215ENST00000543359 ORC2Q13416 577 aaPredicted RBP14.63□□□□□ -0.07
TNFRSF1A-215ENST00000543359 ZNF174Q15697 407 aa14.63□□□□□ -0.07
TNFRSF1A-215ENST00000543359 ADGRD2Q7Z7M1 963 aa14.63□□□□□ -0.07
TNFRSF1A-215ENST00000543359 NOSTRINQ8IVI9 506 aa14.63□□□□□ -0.07
TNFRSF1A-215ENST00000543359 IL27Q8NEV9 243 aa14.63□□□□□ -0.07
TNFRSF1A-215ENST00000543359 PSPC1Q8WXF1 523 aaKnown RBP14.63□□□□□ -0.07
TNFRSF1A-215ENST00000543359 INO80BQ9C086 356 aaPredicted RBP14.63□□□□□ -0.07
TNFRSF1A-215ENST00000543359 CD320Q9NPF0 282 aa14.63□□□□□ -0.07
TNFRSF1A-215ENST00000543359 AGPAT5Q9NUQ2 364 aa14.63□□□□□ -0.07
TNFRSF1A-215ENST00000543359 DACT1Q9NYF0 836 aa14.63□□□□□ -0.07
TNFRSF1A-215ENST00000543359 PCDHB12Q9Y5F1 795 aa14.63□□□□□ -0.07
TNFRSF1A-215ENST00000543359 FSCN2O14926 492 aa14.62□□□□□ -0.07
TNFRSF1A-215ENST00000543359 ASAP2O43150 1006 aa14.62□□□□□ -0.07
TNFRSF1A-215ENST00000543359 NCK2O43639 380 aa14.62□□□□□ -0.07
TNFRSF1A-215ENST00000543359 GAS2O43903 313 aaKnown RBP14.62□□□□□ -0.07
TNFRSF1A-215ENST00000543359 MED24O75448 989 aa14.62□□□□□ -0.07
TNFRSF1A-215ENST00000543359 FGF18O76093 207 aa14.62□□□□□ -0.07
TNFRSF1A-215ENST00000543359 TRAPPC10P48553 1259 aa14.62□□□□□ -0.07
TNFRSF1A-215ENST00000543359 PTENP60484 403 aa14.62□□□□□ -0.07
TNFRSF1A-215ENST00000543359 ERVFC1P60507 584 aa14.62□□□□□ -0.07
TNFRSF1A-215ENST00000543359 UBE3AQ05086 875 aa14.62□□□□□ -0.07
TNFRSF1A-215ENST00000543359 ADAM15Q13444 863 aa14.62□□□□□ -0.07
TNFRSF1A-215ENST00000543359 UBXN11Q5T124 520 aa14.62□□□□□ -0.07
TNFRSF1A-215ENST00000543359 CATSPER4Q7RTX7 472 aa14.62□□□□□ -0.07
TNFRSF1A-215ENST00000543359 SRGAP1Q7Z6B7 1085 aa14.62□□□□□ -0.07
TNFRSF1A-215ENST00000543359 CATSPER3Q86XQ3 398 aa14.62□□□□□ -0.07
TNFRSF1A-215ENST00000543359 IFNLR1Q8IU57 520 aaPredicted RBP14.62□□□□□ -0.07
TNFRSF1A-215ENST00000543359 HELQQ8TDG4 1101 aa14.62□□□□□ -0.07
TNFRSF1A-215ENST00000543359 ASAP3Q8TDY4 903 aa14.62□□□□□ -0.07
TNFRSF1A-215ENST00000543359 PIGOQ8TEQ8 1089 aa14.62□□□□□ -0.07
TNFRSF1A-215ENST00000543359 LPPQ93052 612 aa14.62□□□□□ -0.07
TNFRSF1A-215ENST00000543359 TMX3Q96JJ7 454 aa14.62□□□□□ -0.07
TNFRSF1A-215ENST00000543359 POLR3CQ9BUI4 534 aaPredicted RBP14.62□□□□□ -0.07
TNFRSF1A-215ENST00000543359 AAASQ9NRG9 546 aa14.62□□□□□ -0.07
TNFRSF1A-215ENST00000543359 CLDND1Q9NY35 253 aa14.62□□□□□ -0.07
TNFRSF1A-215ENST00000543359 PIN4Q9Y237 131 aaKnown RBP14.62□□□□□ -0.07
TNFRSF1A-215ENST00000543359 LINC01565O15544 149 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms