RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 TOPORSQ9NS56 1045 aaPredicted RBP10.98□□□□□ -0.65
TOP3A-208ENST00000542570 ZNF286BP0CG31 522 aa10.98□□□□□ -0.65
TOP3A-208ENST00000542570 PKNOX2Q96KN3 472 aa10.98□□□□□ -0.65
TOP3A-208ENST00000542570 MAK16Q9BXY0 300 aaKnown RBP10.98□□□□□ -0.65
TOP3A-208ENST00000542570 TUFT1Q9NNX1 390 aa10.98□□□□□ -0.65
TOP3A-208ENST00000542570 MAGED2Q9UNF1 606 aaPredicted RBP10.98□□□□□ -0.65
TOP3A-208ENST00000542570 MYO1FO00160 1098 aa10.97□□□□□ -0.65
TOP3A-208ENST00000542570 ZNF185O15231 689 aa10.97□□□□□ -0.65
TOP3A-208ENST00000542570 HSF2BPO75031 334 aa10.97□□□□□ -0.65
TOP3A-208ENST00000542570 VTNP04004 478 aa10.97□□□□□ -0.65
TOP3A-208ENST00000542570 RARBP10826 455 aa10.97□□□□□ -0.65
TOP3A-208ENST00000542570 GUCY2DQ02846 1103 aa10.97□□□□□ -0.65
TOP3A-208ENST00000542570 EMC2Q15006 297 aa10.97□□□□□ -0.65
TOP3A-208ENST00000542570 NPY5RQ15761 445 aa10.97□□□□□ -0.65
TOP3A-208ENST00000542570 GLRA4Q5JXX5 417 aa10.97□□□□□ -0.65
TOP3A-208ENST00000542570 AFG1LQ8WV93 481 aa10.97□□□□□ -0.65
TOP3A-208ENST00000542570 HEXIM2Q96MH2 286 aaKnown RBP10.97□□□□□ -0.65
TOP3A-208ENST00000542570 PANX2Q96RD6 677 aa10.97□□□□□ -0.65
TOP3A-208ENST00000542570 RIT2Q99578 217 aa10.97□□□□□ -0.65
TOP3A-208ENST00000542570 C11orf70Q9BRQ4 267 aa10.97□□□□□ -0.65
TOP3A-208ENST00000542570 HEMGNQ9BXL5 484 aa10.97□□□□□ -0.65
TOP3A-208ENST00000542570 FGFBP2Q9BYJ0 223 aa10.97□□□□□ -0.65
TOP3A-208ENST00000542570 NUCKS1Q9H1E3 243 aaKnown RBP10.97□□□□□ -0.65
TOP3A-208ENST00000542570 GJB1P08034 283 aa10.97□□□□□ -0.65
TOP3A-208ENST00000542570 EFCAB12Q6NXP0 572 aa10.97□□□□□ -0.65
TOP3A-208ENST00000542570 TTI2Q6NXR4 508 aa10.97□□□□□ -0.65
TOP3A-208ENST00000542570 NFRKBQ6P4R8 1299 aa10.97□□□□□ -0.65
TOP3A-208ENST00000542570 INTS8Q75QN2 995 aaKnown RBP10.97□□□□□ -0.65
TOP3A-208ENST00000542570 KLRG1Q96E93 195 aa10.97□□□□□ -0.65
TOP3A-208ENST00000542570 RPS6KC1Q96S38 1066 aa10.97□□□□□ -0.65
TOP3A-208ENST00000542570 ALS2Q96Q42 1657 aa10.97□□□□□ -0.65
TOP3A-208ENST00000542570 PALMO75781 387 aa10.97□□□□□ -0.65
TOP3A-208ENST00000542570 AKAP3O75969 853 aa10.97□□□□□ -0.65
TOP3A-208ENST00000542570 CYP2C19P33261 490 aa10.97□□□□□ -0.65
TOP3A-208ENST00000542570 NLRP11P59045 1033 aaKnown RBP10.97□□□□□ -0.65
TOP3A-208ENST00000542570 WDR72Q3MJ13 1102 aa10.97□□□□□ -0.65
TOP3A-208ENST00000542570 GSPT2Q8IYD1 628 aaKnown RBP10.97□□□□□ -0.65
TOP3A-208ENST00000542570 OR6B3Q8NGW1 331 aa10.97□□□□□ -0.65
TOP3A-208ENST00000542570 MMTAG2Q9BU76 263 aaKnown RBP10.97□□□□□ -0.65
TOP3A-208ENST00000542570 SLC38A10Q9HBR0 1119 aa10.97□□□□□ -0.65
TOP3A-208ENST00000542570 CDC23Q9UJX2 597 aa10.97□□□□□ -0.65
TOP3A-208ENST00000542570 MTUS1Q9ULD2 1270 aa10.97□□□□□ -0.65
TOP3A-208ENST00000542570 A0A0U1RQJ8 604 aa10.96□□□□□ -0.65
TOP3A-208ENST00000542570 ESYT3A0FGR9 886 aa10.96□□□□□ -0.65
TOP3A-208ENST00000542570 TBX3O15119 743 aa10.96□□□□□ -0.65
TOP3A-208ENST00000542570 DAPK3O43293 454 aa10.96□□□□□ -0.65
TOP3A-208ENST00000542570 ATMINO43313 823 aaPredicted RBP10.96□□□□□ -0.65
TOP3A-208ENST00000542570 FERP16591 822 aa10.96□□□□□ -0.65
TOP3A-208ENST00000542570 NUMBP49757 651 aa10.96□□□□□ -0.65
TOP3A-208ENST00000542570 SNRNP35Q16560 246 aaKnown RBP10.96□□□□□ -0.65
TOP3A-208ENST00000542570 KIZQ2M2Z5 673 aa10.96□□□□□ -0.65
TOP3A-208ENST00000542570 KRT222Q8N1A0 295 aa10.96□□□□□ -0.65
TOP3A-208ENST00000542570 UBL4BQ8N7F7 174 aa10.96□□□□□ -0.65
TOP3A-208ENST00000542570 ATRIPQ8WXE1 791 aa10.96□□□□□ -0.65
TOP3A-208ENST00000542570 ANKRD36BP1Q96IX9 119 aa10.96□□□□□ -0.65
TOP3A-208ENST00000542570 INTS2Q9H0H0 1204 aaKnown RBP10.96□□□□□ -0.65
TOP3A-208ENST00000542570 KLK14Q9P0G3 267 aa10.96□□□□□ -0.65
TOP3A-208ENST00000542570 SERPING1P05155 500 aa10.96□□□□□ -0.65
TOP3A-208ENST00000542570 WEE2P0C1S8 567 aa10.96□□□□□ -0.65
TOP3A-208ENST00000542570 FAM117BQ6P1L5 589 aa10.96□□□□□ -0.65
TOP3A-208ENST00000542570 ZNF365Q70YC5 407 aa10.96□□□□□ -0.65
TOP3A-208ENST00000542570 PRPF31Q8WWY3 499 aaKnown RBP10.96□□□□□ -0.65
TOP3A-208ENST00000542570 MTMR9Q96QG7 549 aa10.96□□□□□ -0.65
TOP3A-208ENST00000542570 LIMA1Q9UHB6 759 aaKnown RBP10.96□□□□□ -0.65
TOP3A-208ENST00000542570 DGAT1O75907 488 aa10.96□□□□□ -0.66
TOP3A-208ENST00000542570 CALCAP01258 141 aa10.96□□□□□ -0.66
TOP3A-208ENST00000542570 FDX1P10109 184 aa10.96□□□□□ -0.66
TOP3A-208ENST00000542570 CIITAP33076 1130 aa10.96□□□□□ -0.66
TOP3A-208ENST00000542570 RNASELQ05823 741 aaKnown RBP10.96□□□□□ -0.66
TOP3A-208ENST00000542570 ADCY1Q08828 1119 aa10.96□□□□□ -0.66
TOP3A-208ENST00000542570 PPFIA1Q13136 1202 aa10.96□□□□□ -0.66
TOP3A-208ENST00000542570 CALCOCO2Q13137 446 aa10.96□□□□□ -0.66
TOP3A-208ENST00000542570 MAPK8IP2Q13387 824 aaPredicted RBP10.96□□□□□ -0.66
TOP3A-208ENST00000542570 CFAP58Q5T655 872 aa10.96□□□□□ -0.66
TOP3A-208ENST00000542570 RBM43Q6ZSC3 357 aaKnown RBP10.96□□□□□ -0.66
TOP3A-208ENST00000542570 RPUSD2Q8IZ73 545 aaKnown RBP10.96□□□□□ -0.66
TOP3A-208ENST00000542570 PLCD3Q8N3E9 789 aa10.96□□□□□ -0.66
TOP3A-208ENST00000542570 ZBTB45Q96K62 511 aaPredicted RBP10.96□□□□□ -0.66
TOP3A-208ENST00000542570 DNAI2Q9GZS0 605 aa10.96□□□□□ -0.66
TOP3A-208ENST00000542570 NMRK2Q9NPI5 230 aa10.96□□□□□ -0.66
TOP3A-208ENST00000542570 COL20A1Q9P218 1284 aa10.96□□□□□ -0.66
TOP3A-208ENST00000542570 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.96□□□□□ -0.66
TOP3A-208ENST00000542570 H0YCG3 227 aa10.95□□□□□ -0.66
TOP3A-208ENST00000542570 PDXKO00764 312 aa10.95□□□□□ -0.66
TOP3A-208ENST00000542570 CETPP11597 493 aa10.95□□□□□ -0.66
TOP3A-208ENST00000542570 UCHL3P15374 230 aa10.95□□□□□ -0.66
TOP3A-208ENST00000542570 SLC8A3P57103 927 aa10.95□□□□□ -0.66
TOP3A-208ENST00000542570 E2F4Q16254 413 aa10.95□□□□□ -0.66
TOP3A-208ENST00000542570 IL17RAQ96F46 866 aa10.95□□□□□ -0.66
TOP3A-208ENST00000542570 SCN11AQ9UI33 1791 aa10.95□□□□□ -0.66
TOP3A-208ENST00000542570 TRPM3Q9HCF6 1732 aaPredicted RBP10.95□□□□□ -0.66
TOP3A-208ENST00000542570 KLRG2A4D1S0 409 aaPredicted RBP10.95□□□□□ -0.66
TOP3A-208ENST00000542570 N4BP1O75113 896 aaKnown RBP10.95□□□□□ -0.66
TOP3A-208ENST00000542570 FTLP02792 175 aaPredicted RBP10.95□□□□□ -0.66
TOP3A-208ENST00000542570 PLS3P13797 630 aa10.95□□□□□ -0.66
TOP3A-208ENST00000542570 MAPK4P31152 587 aa10.95□□□□□ -0.66
TOP3A-208ENST00000542570 NPTX2P47972 431 aa10.95□□□□□ -0.66
TOP3A-208ENST00000542570 AMHR2Q16671 573 aa10.95□□□□□ -0.66
TOP3A-208ENST00000542570 PPP1R21Q6ZMI0 780 aa10.95□□□□□ -0.66
TOP3A-208ENST00000542570 EP400NLQ6ZTU2 488 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms