RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 IQCA1LA6NCM1 817 aa5.89□□□□□ -1.47
MDM2-228ENST00000542502 NPIPB8E9PQR5 432 aa5.89□□□□□ -1.47
MDM2-228ENST00000542502 PRODHO43272 600 aa5.89□□□□□ -1.47
MDM2-228ENST00000542502 SOD2P04179 222 aa5.89□□□□□ -1.47
MDM2-228ENST00000542502 ZNF888P0CJ79 500 aaPredicted RBP5.89□□□□□ -1.47
MDM2-228ENST00000542502 COMTP21964 271 aa5.89□□□□□ -1.47
MDM2-228ENST00000542502 POLD1P28340 1107 aa5.89□□□□□ -1.47
MDM2-228ENST00000542502 RAC3P60763 192 aa5.89□□□□□ -1.47
MDM2-228ENST00000542502 CELF2-AS1Q8N7Q2 184 aa5.89□□□□□ -1.47
MDM2-228ENST00000542502 SLC43A3Q8NBI5 491 aa5.89□□□□□ -1.47
MDM2-228ENST00000542502 OSBP2Q969R2 916 aa5.89□□□□□ -1.47
MDM2-228ENST00000542502 COG3Q96JB2 828 aa5.89□□□□□ -1.47
MDM2-228ENST00000542502 POLR3GLQ9BT43 218 aa5.89□□□□□ -1.47
MDM2-228ENST00000542502 ST7Q9NRC1 585 aa5.89□□□□□ -1.47
MDM2-228ENST00000542502 USP35Q9P2H5 1018 aa5.89□□□□□ -1.47
MDM2-228ENST00000542502 TTC21BQ7Z4L5 1316 aa5.89□□□□□ -1.47
MDM2-228ENST00000542502 A0A1W2PP64 1363 aa5.89□□□□□ -1.47
MDM2-228ENST00000542502 NPC1L1Q9UHC9 1359 aa5.89□□□□□ -1.47
MDM2-228ENST00000542502 SSH2Q76I76 1423 aa5.89□□□□□ -1.47
MDM2-228ENST00000542502 MED1Q15648 1581 aaPredicted RBP5.89□□□□□ -1.47
MDM2-228ENST00000542502 FAM47E-STBD1D6RA91 191 aa5.88□□□□□ -1.47
MDM2-228ENST00000542502 CUTAO60888 179 aa5.88□□□□□ -1.47
MDM2-228ENST00000542502 PABPC1P11940 636 aaKnown RBP5.88□□□□□ -1.47
MDM2-228ENST00000542502 DDR2Q16832 855 aa5.88□□□□□ -1.47
MDM2-228ENST00000542502 AGBL4Q5VU57 503 aa5.88□□□□□ -1.47
MDM2-228ENST00000542502 NSMFQ6X4W1 530 aa5.88□□□□□ -1.47
MDM2-228ENST00000542502 FUKQ8N0W3 1084 aa5.88□□□□□ -1.47
MDM2-228ENST00000542502 ZNF503Q96F45 646 aa5.88□□□□□ -1.47
MDM2-228ENST00000542502 PANK3Q9H999 370 aa5.88□□□□□ -1.47
MDM2-228ENST00000542502 ARHGEF4Q9NR80 690 aa5.88□□□□□ -1.47
MDM2-228ENST00000542502 KIF24Q5T7B8 1368 aa5.88□□□□□ -1.47
MDM2-228ENST00000542502 PNPLA6Q8IY17 1366 aa5.88□□□□□ -1.47
MDM2-228ENST00000542502 MYOM1P52179 1685 aa5.88□□□□□ -1.47
MDM2-228ENST00000542502 USP54Q70EL1 1684 aa5.88□□□□□ -1.47
MDM2-228ENST00000542502 RAD17O75943 681 aa5.87□□□□□ -1.47
MDM2-228ENST00000542502 ARID5AQ03989 594 aa5.87□□□□□ -1.47
MDM2-228ENST00000542502 DBPQ10586 325 aaPredicted RBP5.87□□□□□ -1.47
MDM2-228ENST00000542502 TOP3AQ13472 1001 aaPredicted RBP5.87□□□□□ -1.47
MDM2-228ENST00000542502 FHL2Q14192 279 aa5.87□□□□□ -1.47
MDM2-228ENST00000542502 NRN1LQ496H8 165 aa5.87□□□□□ -1.47
MDM2-228ENST00000542502 USP39Q53GS9 565 aaKnown RBP5.87□□□□□ -1.47
MDM2-228ENST00000542502 MEX3CQ5U5Q3 659 aaKnown RBP5.87□□□□□ -1.47
MDM2-228ENST00000542502 DPP8Q6V1X1 898 aaPredicted RBP5.87□□□□□ -1.47
MDM2-228ENST00000542502 MCF2L2Q86YR7 1114 aa5.87□□□□□ -1.47
MDM2-228ENST00000542502 HNRNPLLQ8WVV9 542 aaKnown RBP5.87□□□□□ -1.47
MDM2-228ENST00000542502 DRC1Q96MC2 740 aa5.87□□□□□ -1.47
MDM2-228ENST00000542502 ALG1Q9BT22 464 aa5.87□□□□□ -1.47
MDM2-228ENST00000542502 IPPKQ9H8X2 491 aa5.87□□□□□ -1.47
MDM2-228ENST00000542502 SLC39A2Q9NP94 309 aa5.87□□□□□ -1.47
MDM2-228ENST00000542502 OAZ3Q9UMX2 235 aa5.87□□□□□ -1.47
MDM2-228ENST00000542502 USP19O94966 1318 aa5.87□□□□□ -1.47
MDM2-228ENST00000542502 CPDO75976 1380 aa5.87□□□□□ -1.47
MDM2-228ENST00000542502 CD163L1Q9NR16 1453 aa5.87□□□□□ -1.47
MDM2-228ENST00000542502 ABCC6O95255 1503 aa5.87□□□□□ -1.47
MDM2-228ENST00000542502 NRKQ7Z2Y5 1582 aa5.87□□□□□ -1.47
MDM2-228ENST00000542502 MARF1Q9Y4F3 1742 aaKnown RBP5.87□□□□□ -1.47
MDM2-228ENST00000542502 KIF20BQ96Q89 1820 aa5.86□□□□□ -1.47
MDM2-228ENST00000542502 NSD3Q9BZ95 1437 aa5.86□□□□□ -1.47
MDM2-228ENST00000542502 ESYT3A0FGR9 886 aa5.86□□□□□ -1.47
MDM2-228ENST00000542502 BLACEA4D250 179 aa5.86□□□□□ -1.47
MDM2-228ENST00000542502 FYB1O15117 783 aa5.86□□□□□ -1.47
MDM2-228ENST00000542502 GCP02774 474 aa5.86□□□□□ -1.47
MDM2-228ENST00000542502 CR2P20023 1033 aa5.86□□□□□ -1.47
MDM2-228ENST00000542502 TGFB2P61812 414 aa5.86□□□□□ -1.47
MDM2-228ENST00000542502 SF3A1Q15459 793 aaKnown RBP5.86□□□□□ -1.47
MDM2-228ENST00000542502 RNF151Q2KHN1 245 aa5.86□□□□□ -1.47
MDM2-228ENST00000542502 ZNF772Q68DY9 489 aaPredicted RBP5.86□□□□□ -1.47
MDM2-228ENST00000542502 DPH6Q7L8W6 267 aa5.86□□□□□ -1.47
MDM2-228ENST00000542502 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.86□□□□□ -1.47
MDM2-228ENST00000542502 SH3RF2Q8TEC5 729 aa5.86□□□□□ -1.47
MDM2-228ENST00000542502 GMLQ99445 158 aa5.86□□□□□ -1.47
MDM2-228ENST00000542502 CD244Q9BZW8 370 aa5.86□□□□□ -1.47
MDM2-228ENST00000542502 NWD2Q9ULI1 1742 aa5.85□□□□□ -1.47
MDM2-228ENST00000542502 ANKRD26Q9UPS8 1709 aa5.85□□□□□ -1.47
MDM2-228ENST00000542502 TCRBV5S4A2TA0A5A2 114 aa5.85□□□□□ -1.47
MDM2-228ENST00000542502 ACO1P21399 889 aaKnown RBP5.85□□□□□ -1.47
MDM2-228ENST00000542502 IFRD2Q12894 506 aaPredicted RBP5.85□□□□□ -1.47
MDM2-228ENST00000542502 ZMAT1Q5H9K5 638 aa5.85□□□□□ -1.47
MDM2-228ENST00000542502 Q6ZSN1 163 aa5.85□□□□□ -1.47
MDM2-228ENST00000542502 ANKS3Q6ZW76 656 aa5.85□□□□□ -1.47
MDM2-228ENST00000542502 POLNQ7Z5Q5 900 aa5.85□□□□□ -1.47
MDM2-228ENST00000542502 MORC1Q86VD1 984 aa5.85□□□□□ -1.47
MDM2-228ENST00000542502 ST13P5Q8NFI4 369 aaPredicted RBP5.85□□□□□ -1.47
MDM2-228ENST00000542502 DDX17Q92841 729 aaKnown RBP5.85□□□□□ -1.47
MDM2-228ENST00000542502 EXTL1Q92935 676 aa5.85□□□□□ -1.47
MDM2-228ENST00000542502 PRDM11Q9NQV5 511 aa5.85□□□□□ -1.47
MDM2-228ENST00000542502 SLC30A1Q9Y6M5 507 aa5.85□□□□□ -1.47
MDM2-228ENST00000542502 COL14A1Q05707 1796 aaKnown RBP5.85□□□□□ -1.47
MDM2-228ENST00000542502 PIK3C2AO00443 1686 aa5.85□□□□□ -1.47
MDM2-228ENST00000542502 SLIT3O75094 1523 aa5.84□□□□□ -1.47
MDM2-228ENST00000542502 RTL1A6NKG5 1358 aa5.84□□□□□ -1.47
MDM2-228ENST00000542502 AATKQ6ZMQ8 1374 aa5.84□□□□□ -1.47
MDM2-228ENST00000542502 TRAV20A0A0B4J274 112 aa5.84□□□□□ -1.47
MDM2-228ENST00000542502 KLF4O43474 513 aa5.84□□□□□ -1.47
MDM2-228ENST00000542502 ZNF202O95125 648 aa5.84□□□□□ -1.47
MDM2-228ENST00000542502 PTPN1P18031 435 aaKnown RBP5.84□□□□□ -1.47
MDM2-228ENST00000542502 DNAJA1P31689 397 aaKnown RBP5.84□□□□□ -1.47
MDM2-228ENST00000542502 ETV4P43268 484 aa5.84□□□□□ -1.47
MDM2-228ENST00000542502 ABHD18Q0P651 414 aa5.84□□□□□ -1.47
MDM2-228ENST00000542502 BTBD8Q5XKL5 378 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms