RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 MAFO75444 373 aaPredicted RBP22.33■■□□□ 1.17
DDX11-220ENST00000542244 ALADP13716 330 aa22.33■■□□□ 1.17
DDX11-220ENST00000542244 FDPSP14324 419 aaKnown RBP22.33■■□□□ 1.17
DDX11-220ENST00000542244 LAG3P18627 525 aa22.33■■□□□ 1.17
DDX11-220ENST00000542244 PIK3AP1Q6ZUJ8 805 aa22.33■■□□□ 1.17
DDX11-220ENST00000542244 RHPN2Q8IUC4 686 aa22.33■■□□□ 1.17
DDX11-220ENST00000542244 C22orf23Q9BZE7 217 aa22.33■■□□□ 1.17
DDX11-220ENST00000542244 SLKQ9H2G2 1235 aaPredicted RBP22.33■■□□□ 1.17
DDX11-220ENST00000542244 BMP2KQ9NSY1 1161 aaPredicted RBP22.33■■□□□ 1.17
DDX11-220ENST00000542244 WNT7AO00755 349 aa22.32■■□□□ 1.16
DDX11-220ENST00000542244 B4GALT3O60512 393 aa22.32■■□□□ 1.16
DDX11-220ENST00000542244 AK2P54819 239 aa22.32■■□□□ 1.16
DDX11-220ENST00000542244 PLCB3Q01970 1234 aa22.32■■□□□ 1.16
DDX11-220ENST00000542244 GALNT17Q6IS24 598 aa22.32■■□□□ 1.16
DDX11-220ENST00000542244 LLGL2Q6P1M3 1020 aa22.32■■□□□ 1.16
DDX11-220ENST00000542244 TMEM173Q86WV6 379 aaPredicted RBP22.32■■□□□ 1.16
DDX11-220ENST00000542244 FEZF2Q8TBJ5 459 aa22.32■■□□□ 1.16
DDX11-220ENST00000542244 TCF25Q9BQ70 676 aa22.32■■□□□ 1.16
DDX11-220ENST00000542244 RGL1Q9NZL6 768 aa22.32■■□□□ 1.16
DDX11-220ENST00000542244 HCN4Q9Y3Q4 1203 aa22.32■■□□□ 1.16
DDX11-220ENST00000542244 PSMC5P62195 406 aa22.31■■□□□ 1.16
DDX11-220ENST00000542244 NR5A1Q13285 461 aa22.31■■□□□ 1.16
DDX11-220ENST00000542244 PPP2R5CQ13362 524 aa22.31■■□□□ 1.16
DDX11-220ENST00000542244 CPLX2Q6PUV4 134 aaKnown RBP22.31■■□□□ 1.16
DDX11-220ENST00000542244 NEK8Q86SG6 692 aa22.31■■□□□ 1.16
DDX11-220ENST00000542244 POTEDQ86YR6 584 aa22.31■■□□□ 1.16
DDX11-220ENST00000542244 SLC39A11Q8N1S5 342 aa22.31■■□□□ 1.16
DDX11-220ENST00000542244 LRRC43Q8N309 656 aa22.31■■□□□ 1.16
DDX11-220ENST00000542244 BCL7CQ8WUZ0 217 aaPredicted RBP22.31■■□□□ 1.16
DDX11-220ENST00000542244 PPP2R3CQ969Q6 453 aa22.31■■□□□ 1.16
DDX11-220ENST00000542244 NLRP4Q96MN2 994 aa22.31■■□□□ 1.16
DDX11-220ENST00000542244 ZNF558Q96NG5 402 aa22.31■■□□□ 1.16
DDX11-220ENST00000542244 GCOM2Q9BZD3 368 aaPredicted RBP22.31■■□□□ 1.16
DDX11-220ENST00000542244 S1PR5Q9H228 398 aa22.31■■□□□ 1.16
DDX11-220ENST00000542244 STK36Q9NRP7 1315 aa22.31■■□□□ 1.16
DDX11-220ENST00000542244 CCDC194A0A1B0GVG4 234 aa22.3■■□□□ 1.16
DDX11-220ENST00000542244 LOC730098B7Z3J9 87 aa22.3■■□□□ 1.16
DDX11-220ENST00000542244 PHKA2P46019 1235 aa22.3■■□□□ 1.16
DDX11-220ENST00000542244 SYCE2Q6PIF2 218 aa22.3■■□□□ 1.16
DDX11-220ENST00000542244 FAM43BQ6ZT52 329 aaPredicted RBP22.3■■□□□ 1.16
DDX11-220ENST00000542244 HFE2Q6ZVN8 426 aa22.3■■□□□ 1.16
DDX11-220ENST00000542244 TNFRSF25Q93038 417 aa22.3■■□□□ 1.16
DDX11-220ENST00000542244 TMEM143Q96AN5 459 aa22.3■■□□□ 1.16
DDX11-220ENST00000542244 MINDY3Q9H8M7 445 aa22.3■■□□□ 1.16
DDX11-220ENST00000542244 IFT122Q9HBG6 1241 aa22.3■■□□□ 1.16
DDX11-220ENST00000542244 ENTPD7Q9NQZ7 604 aa22.3■■□□□ 1.16
DDX11-220ENST00000542244 CYP26B1Q9NR63 512 aa22.3■■□□□ 1.16
DDX11-220ENST00000542244 LZTS1Q9Y250 596 aa22.3■■□□□ 1.16
DDX11-220ENST00000542244 CCNT1O60563 726 aaKnown RBP22.29■■□□□ 1.16
DDX11-220ENST00000542244 AFF1P51825 1210 aaKnown RBP22.29■■□□□ 1.16
DDX11-220ENST00000542244 FOSBP53539 338 aa22.29■■□□□ 1.16
DDX11-220ENST00000542244 BCAR1P56945 870 aa22.29■■□□□ 1.16
DDX11-220ENST00000542244 SPIRE1Q08AE8 756 aa22.29■■□□□ 1.16
DDX11-220ENST00000542244 ME3Q16798 604 aa22.29■■□□□ 1.16
DDX11-220ENST00000542244 HERC4Q5GLZ8 1057 aaPredicted RBP22.29■■□□□ 1.16
DDX11-220ENST00000542244 PPP4R3AQ6IN85 833 aa22.29■■□□□ 1.16
DDX11-220ENST00000542244 ABI1Q8IZP0 508 aa22.29■■□□□ 1.16
DDX11-220ENST00000542244 AUTS2Q8WXX7 1259 aa22.29■■□□□ 1.16
DDX11-220ENST00000542244 SUSD6Q92537 303 aa22.29■■□□□ 1.16
DDX11-220ENST00000542244 RNF216Q9NWF9 866 aaPredicted RBP22.29■■□□□ 1.16
DDX11-220ENST00000542244 SPG21Q9NZD8 308 aa22.29■■□□□ 1.16
DDX11-220ENST00000542244 ORC3Q9UBD5 711 aaPredicted RBP22.29■■□□□ 1.16
DDX11-220ENST00000542244 PIN4Q9Y237 131 aaKnown RBP22.29■■□□□ 1.16
DDX11-220ENST00000542244 HOXA2O43364 376 aa22.28■■□□□ 1.16
DDX11-220ENST00000542244 TECP42680 631 aa22.28■■□□□ 1.16
DDX11-220ENST00000542244 QARSP47897 775 aaKnown RBP22.28■■□□□ 1.16
DDX11-220ENST00000542244 ST3GAL1Q11201 340 aa22.28■■□□□ 1.16
DDX11-220ENST00000542244 CTTNQ14247 550 aaKnown RBP22.28■■□□□ 1.16
DDX11-220ENST00000542244 CSPP1Q1MSJ5 1256 aa22.28■■□□□ 1.16
DDX11-220ENST00000542244 KANK3Q6NY19 840 aa22.28■■□□□ 1.16
DDX11-220ENST00000542244 DYDC2Q96IM9 177 aa22.28■■□□□ 1.16
DDX11-220ENST00000542244 RPGRIP1Q96KN7 1286 aa22.28■■□□□ 1.16
DDX11-220ENST00000542244 TRIOO75962 3097 aa22.27■■□□□ 1.16
DDX11-220ENST00000542244 A0A087WWV3 80 aa22.27■■□□□ 1.16
DDX11-220ENST00000542244 JAK2O60674 1132 aa22.27■■□□□ 1.16
DDX11-220ENST00000542244 EOMESO95936 686 aa22.27■■□□□ 1.16
DDX11-220ENST00000542244 CYP4A11Q02928 519 aa22.27■■□□□ 1.16
DDX11-220ENST00000542244 TWF2Q6IBS0 349 aaKnown RBP22.27■■□□□ 1.16
DDX11-220ENST00000542244 NCAPH2Q6IBW4 605 aa22.27■■□□□ 1.16
DDX11-220ENST00000542244 ANKRD54Q6NXT1 300 aa22.27■■□□□ 1.16
DDX11-220ENST00000542244 TMC7Q7Z402 723 aa22.27■■□□□ 1.16
DDX11-220ENST00000542244 PRPF31Q8WWY3 499 aaKnown RBP22.27■■□□□ 1.16
DDX11-220ENST00000542244 FAM20AQ96MK3 541 aa22.27■■□□□ 1.16
DDX11-220ENST00000542244 POP1Q99575 1024 aaKnown RBP22.27■■□□□ 1.16
DDX11-220ENST00000542244 VN1R3Q9BXE9 311 aa22.27■■□□□ 1.16
DDX11-220ENST00000542244 NRDE2Q9H7Z3 1164 aa22.27■■□□□ 1.16
DDX11-220ENST00000542244 DNAJB4Q9UDY4 337 aa22.27■■□□□ 1.16
DDX11-220ENST00000542244 C2orf71A6NGG8 1288 aa22.26■■□□□ 1.15
DDX11-220ENST00000542244 SEC24BO95487 1268 aa22.26■■□□□ 1.15
DDX11-220ENST00000542244 SP100P23497 879 aaPredicted RBP22.26■■□□□ 1.15
DDX11-220ENST00000542244 DNM2P50570 870 aa22.26■■□□□ 1.15
DDX11-220ENST00000542244 CBX2Q14781 532 aaPredicted RBP22.26■■□□□ 1.15
DDX11-220ENST00000542244 UBXN11Q5T124 520 aa22.26■■□□□ 1.15
DDX11-220ENST00000542244 TMEM184AQ6ZMB5 413 aa22.26■■□□□ 1.15
DDX11-220ENST00000542244 CATSPER4Q7RTX7 472 aa22.26■■□□□ 1.15
DDX11-220ENST00000542244 ZNF410Q86VK4 478 aa22.26■■□□□ 1.15
DDX11-220ENST00000542244 FAM177A1Q8N128 213 aaPredicted RBP22.26■■□□□ 1.15
DDX11-220ENST00000542244 ZNF710Q8N1W2 664 aa22.26■■□□□ 1.15
DDX11-220ENST00000542244 CEP170P1Q96L14 293 aa22.26■■□□□ 1.15
DDX11-220ENST00000542244 CDCA3Q99618 268 aaPredicted RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms