RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 SCTRP47872 440 aa16.59■□□□□ 0.25
CNOT9-208ENST00000542068 SLC12A3P55017 1021 aa16.59■□□□□ 0.25
CNOT9-208ENST00000542068 DRAP1Q14919 205 aaPredicted RBP16.59■□□□□ 0.25
CNOT9-208ENST00000542068 SNCBQ16143 134 aa16.59■□□□□ 0.25
CNOT9-208ENST00000542068 ANKRD20A8PQ5CZ79 823 aa16.59■□□□□ 0.25
CNOT9-208ENST00000542068 LRCH2Q5VUJ6 765 aa16.59■□□□□ 0.25
CNOT9-208ENST00000542068 PARP9Q8IXQ6 854 aa16.59■□□□□ 0.25
CNOT9-208ENST00000542068 SLFN12Q8IYM2 578 aa16.59■□□□□ 0.25
CNOT9-208ENST00000542068 N4BP2L2Q92802 583 aaPredicted RBP16.59■□□□□ 0.25
CNOT9-208ENST00000542068 ELMO3Q96BJ8 720 aa16.59■□□□□ 0.25
CNOT9-208ENST00000542068 FAM212AQ96EL1 285 aa16.59■□□□□ 0.25
CNOT9-208ENST00000542068 DLEC1Q9Y238 1755 aa16.59■□□□□ 0.25
CNOT9-208ENST00000542068 A0A1W2PRG0 241 aa16.59■□□□□ 0.25
CNOT9-208ENST00000542068 CALUO43852 315 aaPredicted RBP16.59■□□□□ 0.25
CNOT9-208ENST00000542068 GAS7O60861 476 aa16.59■□□□□ 0.25
CNOT9-208ENST00000542068 MMEP08473 750 aa16.59■□□□□ 0.25
CNOT9-208ENST00000542068 CCDC172P0C7W6 258 aa16.59■□□□□ 0.25
CNOT9-208ENST00000542068 SMTNP53814 917 aa16.59■□□□□ 0.25
CNOT9-208ENST00000542068 LRIG3Q6UXM1 1119 aa16.59■□□□□ 0.25
CNOT9-208ENST00000542068 PODNQ7Z5L7 613 aa16.59■□□□□ 0.25
CNOT9-208ENST00000542068 CDAN1Q8IWY9 1227 aa16.59■□□□□ 0.25
CNOT9-208ENST00000542068 FBXO25Q8TCJ0 367 aa16.59■□□□□ 0.25
CNOT9-208ENST00000542068 C18orf8Q96DM3 657 aa16.59■□□□□ 0.25
CNOT9-208ENST00000542068 DYDC2Q96IM9 177 aa16.59■□□□□ 0.25
CNOT9-208ENST00000542068 MTFR1LQ9H019 292 aa16.59■□□□□ 0.25
CNOT9-208ENST00000542068 THAP2Q9H0W7 228 aa16.59■□□□□ 0.25
CNOT9-208ENST00000542068 DNAJC12Q9UKB3 198 aa16.59■□□□□ 0.25
CNOT9-208ENST00000542068 DAAM1Q9Y4D1 1078 aa16.59■□□□□ 0.25
CNOT9-208ENST00000542068 MSH4O15457 936 aa16.58■□□□□ 0.25
CNOT9-208ENST00000542068 NF2P35240 595 aa16.58■□□□□ 0.25
CNOT9-208ENST00000542068 EPHA7Q15375 998 aa16.58■□□□□ 0.25
CNOT9-208ENST00000542068 DBR1Q9UK59 544 aaKnown RBP16.58■□□□□ 0.25
CNOT9-208ENST00000542068 ATMINO43313 823 aaPredicted RBP16.58■□□□□ 0.24
CNOT9-208ENST00000542068 TNFAIP3P21580 790 aa16.58■□□□□ 0.24
CNOT9-208ENST00000542068 MARCKSL1P49006 195 aa16.58■□□□□ 0.24
CNOT9-208ENST00000542068 BIRC3Q13489 604 aa16.58■□□□□ 0.24
CNOT9-208ENST00000542068 MTMR3Q13615 1198 aa16.58■□□□□ 0.24
CNOT9-208ENST00000542068 HHIPL2Q6UWX4 724 aa16.58■□□□□ 0.24
CNOT9-208ENST00000542068 TMEM179Q6ZVK1 233 aa16.58■□□□□ 0.24
CNOT9-208ENST00000542068 TBC1D1Q86TI0 1168 aaPredicted RBP16.58■□□□□ 0.24
CNOT9-208ENST00000542068 FUKQ8N0W3 1084 aa16.58■□□□□ 0.24
CNOT9-208ENST00000542068 BANK1Q8NDB2 785 aa16.58■□□□□ 0.24
CNOT9-208ENST00000542068 SLC35C1Q96A29 364 aa16.58■□□□□ 0.24
CNOT9-208ENST00000542068 EIF2AK1Q9BQI3 630 aaKnown RBP16.58■□□□□ 0.24
CNOT9-208ENST00000542068 TPX2Q9ULW0 747 aaKnown RBP16.58■□□□□ 0.24
CNOT9-208ENST00000542068 KIAA1551Q9HCM1 1747 aa16.58■□□□□ 0.24
CNOT9-208ENST00000542068 KCNJ1P48048 391 aa16.58■□□□□ 0.24
CNOT9-208ENST00000542068 SLC29A2Q14542 456 aa16.58■□□□□ 0.24
CNOT9-208ENST00000542068 C6orf89Q6UWU4 347 aa16.58■□□□□ 0.24
CNOT9-208ENST00000542068 FAM186BQ8IYM0 893 aa16.58■□□□□ 0.24
CNOT9-208ENST00000542068 CTTNBP2NLQ9P2B4 639 aa16.58■□□□□ 0.24
CNOT9-208ENST00000542068 ODF2LQ9ULJ1 636 aa16.58■□□□□ 0.24
CNOT9-208ENST00000542068 PRR12Q9ULL5 1215 aa16.58■□□□□ 0.24
CNOT9-208ENST00000542068 DCAF12L1Q5VU92 463 aa16.57■□□□□ 0.24
CNOT9-208ENST00000542068 DENND2CQ68D51 928 aa16.57■□□□□ 0.24
CNOT9-208ENST00000542068 CPNE8Q86YQ8 564 aa16.57■□□□□ 0.24
CNOT9-208ENST00000542068 OGFOD1Q8N543 542 aa16.57■□□□□ 0.24
CNOT9-208ENST00000542068 EPS8L3Q8TE67 593 aaKnown RBP16.57■□□□□ 0.24
CNOT9-208ENST00000542068 XPO6Q96QU8 1125 aaKnown RBP16.57■□□□□ 0.24
CNOT9-208ENST00000542068 PRMT1Q99873 361 aaKnown RBP16.57■□□□□ 0.24
CNOT9-208ENST00000542068 RGS16O15492 202 aaPredicted RBP16.57■□□□□ 0.24
CNOT9-208ENST00000542068 STAT2P52630 851 aa16.57■□□□□ 0.24
CNOT9-208ENST00000542068 BYSLQ13895 437 aaKnown RBP16.57■□□□□ 0.24
CNOT9-208ENST00000542068 MESDQ14696 234 aa16.57■□□□□ 0.24
CNOT9-208ENST00000542068 SLC27A3Q5K4L6 730 aa16.57■□□□□ 0.24
CNOT9-208ENST00000542068 DYDC1Q8WWB3 177 aa16.57■□□□□ 0.24
CNOT9-208ENST00000542068 SEMA4AQ9H3S1 761 aa16.57■□□□□ 0.24
CNOT9-208ENST00000542068 BZW2Q9Y6E2 419 aaKnown RBP16.57■□□□□ 0.24
CNOT9-208ENST00000542068 IGKV6D-41A0A0C4DH26 115 aa16.57■□□□□ 0.24
CNOT9-208ENST00000542068 CCDC188H7C350 402 aa16.57■□□□□ 0.24
CNOT9-208ENST00000542068 RGL2O15211 777 aa16.57■□□□□ 0.24
CNOT9-208ENST00000542068 ODR4Q5SWX8 454 aa16.57■□□□□ 0.24
CNOT9-208ENST00000542068 FRMD5Q7Z6J6 570 aa16.57■□□□□ 0.24
CNOT9-208ENST00000542068 PHLDB2Q86SQ0 1253 aa16.57■□□□□ 0.24
CNOT9-208ENST00000542068 LRRC34Q8IZ02 419 aa16.57■□□□□ 0.24
CNOT9-208ENST00000542068 ALG3Q92685 438 aa16.57■□□□□ 0.24
CNOT9-208ENST00000542068 CHMP6Q96FZ7 201 aa16.57■□□□□ 0.24
CNOT9-208ENST00000542068 BTBD6Q96KE9 485 aa16.57■□□□□ 0.24
CNOT9-208ENST00000542068 SIX2Q9NPC8 291 aa16.57■□□□□ 0.24
CNOT9-208ENST00000542068 ACP6Q9NPH0 428 aa16.57■□□□□ 0.24
CNOT9-208ENST00000542068 CTDP1Q9Y5B0 961 aaPredicted RBP16.57■□□□□ 0.24
CNOT9-208ENST00000542068 RASSF9O75901 435 aa16.56■□□□□ 0.24
CNOT9-208ENST00000542068 ORC2Q13416 577 aaPredicted RBP16.56■□□□□ 0.24
CNOT9-208ENST00000542068 EDRF1Q3B7T1 1238 aa16.56■□□□□ 0.24
CNOT9-208ENST00000542068 LARGE2Q8N3Y3 721 aa16.56■□□□□ 0.24
CNOT9-208ENST00000542068 SLC20A1Q8WUM9 679 aa16.56■□□□□ 0.24
CNOT9-208ENST00000542068 KRT35Q92764 455 aa16.56■□□□□ 0.24
CNOT9-208ENST00000542068 BTAF1O14981 1849 aa16.56■□□□□ 0.24
CNOT9-208ENST00000542068 GOLGA6L10A0A0M3HER8 536 aa16.56■□□□□ 0.24
CNOT9-208ENST00000542068 SCP2P22307 547 aa16.56■□□□□ 0.24
CNOT9-208ENST00000542068 RPL13P26373 211 aaKnown RBP16.56■□□□□ 0.24
CNOT9-208ENST00000542068 NT5C2P49902 561 aa16.56■□□□□ 0.24
CNOT9-208ENST00000542068 PMS2P54278 862 aa16.56■□□□□ 0.24
CNOT9-208ENST00000542068 RRP1BQ14684 758 aaKnown RBP16.56■□□□□ 0.24
CNOT9-208ENST00000542068 PAXIP1Q6ZW49 1069 aaPredicted RBP16.56■□□□□ 0.24
CNOT9-208ENST00000542068 FAM178BQ8IXR5 827 aa16.56■□□□□ 0.24
CNOT9-208ENST00000542068 SYCE1Q8N0S2 351 aa16.56■□□□□ 0.24
CNOT9-208ENST00000542068 ANKRD42Q8N9B4 389 aa16.56■□□□□ 0.24
CNOT9-208ENST00000542068 FAM114A2Q9NRY5 505 aa16.56■□□□□ 0.24
CNOT9-208ENST00000542068 SUCLA2Q9P2R7 463 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms