RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 GRIK4Q16099 956 aa30.63■■■□□ 2.49
CCM2-218ENST00000541586 C17orf102A2RUQ5 167 aa30.62■■■□□ 2.49
CCM2-218ENST00000541586 DAW1Q8N136 415 aa30.62■■■□□ 2.49
CCM2-218ENST00000541586 ZBTB10Q96DT7 871 aa30.62■■■□□ 2.49
CCM2-218ENST00000541586 TRIM44Q96DX7 344 aaPredicted RBP30.62■■■□□ 2.49
CCM2-218ENST00000541586 NAP1L5Q96NT1 182 aaPredicted RBP30.62■■■□□ 2.49
CCM2-218ENST00000541586 MRPL44Q9H9J2 332 aaKnown RBP30.62■■■□□ 2.49
CCM2-218ENST00000541586 SEL1LQ9UBV2 794 aa30.62■■■□□ 2.49
CCM2-218ENST00000541586 NRCAMQ92823 1304 aa30.62■■■□□ 2.49
CCM2-218ENST00000541586 HIC1Q14526 733 aa30.61■■■□□ 2.49
CCM2-218ENST00000541586 GDF6Q6KF10 455 aaPredicted RBP30.61■■■□□ 2.49
CCM2-218ENST00000541586 MAEAQ7L5Y9 396 aa30.61■■■□□ 2.49
CCM2-218ENST00000541586 EPM2AIP1Q7L775 607 aaPredicted RBP30.61■■■□□ 2.49
CCM2-218ENST00000541586 DRC7Q8IY82 874 aa30.61■■■□□ 2.49
CCM2-218ENST00000541586 CSGALNACT2Q8N6G5 542 aa30.61■■■□□ 2.49
CCM2-218ENST00000541586 SRRTQ9BXP5 876 aaKnown RBP30.61■■■□□ 2.49
CCM2-218ENST00000541586 NIFKQ9BYG3 293 aaKnown RBP30.61■■■□□ 2.49
CCM2-218ENST00000541586 GTF2IRD1Q9UHL9 959 aa30.61■■■□□ 2.49
CCM2-218ENST00000541586 CBFA2T2O43439 604 aa30.61■■■□□ 2.49
CCM2-218ENST00000541586 KIF20AO95235 890 aa30.61■■■□□ 2.49
CCM2-218ENST00000541586 PTMAP06454 111 aaKnown RBP30.61■■■□□ 2.49
CCM2-218ENST00000541586 IRF2BP1Q8IU81 584 aa30.61■■■□□ 2.49
CCM2-218ENST00000541586 LMBR1Q8WVP7 490 aa30.61■■■□□ 2.49
CCM2-218ENST00000541586 THAP9Q9H5L6 903 aa30.61■■■□□ 2.49
CCM2-218ENST00000541586 CYP26B1Q9NR63 512 aa30.61■■■□□ 2.49
CCM2-218ENST00000541586 MYBP10242 640 aa30.6■■■□□ 2.49
CCM2-218ENST00000541586 ZNF484Q5JVG2 852 aa30.6■■■□□ 2.49
CCM2-218ENST00000541586 APTXQ7Z2E3 356 aaKnown RBP30.6■■■□□ 2.49
CCM2-218ENST00000541586 NOC3LQ8WTT2 800 aaKnown RBP30.6■■■□□ 2.49
CCM2-218ENST00000541586 TIPINQ9BVW5 301 aa30.6■■■□□ 2.49
CCM2-218ENST00000541586 TRMT13Q9NUP7 481 aaKnown RBP30.6■■■□□ 2.49
CCM2-218ENST00000541586 RRN3P2A6NIE6 340 aa30.59■■■□□ 2.49
CCM2-218ENST00000541586 ZBTB42B2RXF5 422 aa30.59■■■□□ 2.49
CCM2-218ENST00000541586 PQBP1O60828 265 aaKnown RBP30.59■■■□□ 2.49
CCM2-218ENST00000541586 GNAT1P11488 350 aa30.59■■■□□ 2.49
CCM2-218ENST00000541586 LRRC63Q05C16 580 aa30.59■■■□□ 2.49
CCM2-218ENST00000541586 UBE2Q1Q7Z7E8 422 aa30.59■■■□□ 2.49
CCM2-218ENST00000541586 NELFCDQ8IXH7 590 aa30.59■■■□□ 2.49
CCM2-218ENST00000541586 SLC43A3Q8NBI5 491 aa30.59■■■□□ 2.49
CCM2-218ENST00000541586 ATP11BQ9Y2G3 1177 aa30.59■■■□□ 2.49
CCM2-218ENST00000541586 KAT6AQ92794 2004 aa30.59■■■□□ 2.49
CCM2-218ENST00000541586 TREHO43280 583 aa30.59■■■□□ 2.49
CCM2-218ENST00000541586 CDK7P50613 346 aa30.59■■■□□ 2.49
CCM2-218ENST00000541586 SPAG1Q07617 926 aa30.59■■■□□ 2.49
CCM2-218ENST00000541586 LRRC26Q2I0M4 334 aa30.59■■■□□ 2.49
CCM2-218ENST00000541586 TCP11X2Q5H9J9 407 aa30.59■■■□□ 2.49
CCM2-218ENST00000541586 ODR4Q5SWX8 454 aa30.59■■■□□ 2.49
CCM2-218ENST00000541586 FOXR2Q6PJQ5 311 aa30.59■■■□□ 2.49
CCM2-218ENST00000541586 FIZ1Q96SL8 496 aa30.59■■■□□ 2.49
CCM2-218ENST00000541586 TRPV6Q9H1D0 765 aa30.59■■■□□ 2.49
CCM2-218ENST00000541586 NOD1Q9Y239 953 aa30.59■■■□□ 2.49
CCM2-218ENST00000541586 KCNJ18B7U540 433 aa30.58■■■□□ 2.49
CCM2-218ENST00000541586 GCNT3O95395 438 aa30.58■■■□□ 2.49
CCM2-218ENST00000541586 KLRC1P26715 233 aa30.58■■■□□ 2.49
CCM2-218ENST00000541586 KCNJ12Q14500 433 aa30.58■■■□□ 2.49
CCM2-218ENST00000541586 PTGISQ16647 500 aa30.58■■■□□ 2.49
CCM2-218ENST00000541586 TRIM60Q495X7 471 aa30.58■■■□□ 2.49
CCM2-218ENST00000541586 ZCWPW2Q504Y3 356 aa30.58■■■□□ 2.49
CCM2-218ENST00000541586 SESTD1Q86VW0 696 aa30.58■■■□□ 2.49
CCM2-218ENST00000541586 TSG101Q99816 390 aa30.58■■■□□ 2.49
CCM2-218ENST00000541586 KCTD10Q9H3F6 313 aa30.58■■■□□ 2.49
CCM2-218ENST00000541586 INTS13Q9NVM9 706 aa30.58■■■□□ 2.49
CCM2-218ENST00000541586 ARID2Q68CP9 1835 aa30.57■■■□□ 2.49
CCM2-218ENST00000541586 NMT1P30419 496 aaKnown RBP30.57■■■□□ 2.48
CCM2-218ENST00000541586 TBC1D8BQ0IIM8 1120 aa30.57■■■□□ 2.48
CCM2-218ENST00000541586 TARBP2Q15633 366 aaKnown RBP30.57■■■□□ 2.48
CCM2-218ENST00000541586 MARCH8Q5T0T0 291 aa30.57■■■□□ 2.48
CCM2-218ENST00000541586 FAM178BQ8IXR5 827 aa30.57■■■□□ 2.48
CCM2-218ENST00000541586 EEF2KMTQ96G04 330 aa30.57■■■□□ 2.48
CCM2-218ENST00000541586 LIMA1Q9UHB6 759 aaKnown RBP30.57■■■□□ 2.48
CCM2-218ENST00000541586 B4GALT4O60513 344 aa30.56■■■□□ 2.48
CCM2-218ENST00000541586 PRPF6O94906 941 aaKnown RBP30.56■■■□□ 2.48
CCM2-218ENST00000541586 PTPN11Q06124 597 aaPredicted RBP30.56■■■□□ 2.48
CCM2-218ENST00000541586 KRT31Q15323 416 aa30.56■■■□□ 2.48
CCM2-218ENST00000541586 BMT2Q1RMZ1 405 aa30.56■■■□□ 2.48
CCM2-218ENST00000541586 METTL13Q8N6R0 699 aa30.56■■■□□ 2.48
CCM2-218ENST00000541586 DRC1Q96MC2 740 aa30.56■■■□□ 2.48
CCM2-218ENST00000541586 CTAGE1Q96RT6 745 aa30.56■■■□□ 2.48
CCM2-218ENST00000541586 SUGCTQ9HAC7 445 aa30.56■■■□□ 2.48
CCM2-218ENST00000541586 MYH11P35749 1972 aa30.56■■■□□ 2.48
CCM2-218ENST00000541586 HOXD13P35453 343 aa30.56■■■□□ 2.48
CCM2-218ENST00000541586 RTP1P59025 263 aa30.56■■■□□ 2.48
CCM2-218ENST00000541586 MTHFD1LQ6UB35 978 aa30.56■■■□□ 2.48
CCM2-218ENST00000541586 ZNF720Q7Z2F6 126 aa30.56■■■□□ 2.48
CCM2-218ENST00000541586 ZNF507Q8TCN5 953 aa30.56■■■□□ 2.48
CCM2-218ENST00000541586 GPRC5CQ9NQ84 441 aa30.56■■■□□ 2.48
CCM2-218ENST00000541586 LARSQ9P2J5 1176 aaKnown RBP30.56■■■□□ 2.48
CCM2-218ENST00000541586 A0A1B0GTH6 734 aa30.55■■■□□ 2.48
CCM2-218ENST00000541586 LRRC10BA6NIK2 292 aa30.55■■■□□ 2.48
CCM2-218ENST00000541586 GOLGA6L6A8MZA4 724 aa30.55■■■□□ 2.48
CCM2-218ENST00000541586 DGAT1O75907 488 aa30.55■■■□□ 2.48
CCM2-218ENST00000541586 POLGP54098 1239 aaPredicted RBP30.55■■■□□ 2.48
CCM2-218ENST00000541586 KNOP1Q1ED39 458 aaKnown RBP30.55■■■□□ 2.48
CCM2-218ENST00000541586 HS1BP3Q53T59 392 aa30.55■■■□□ 2.48
CCM2-218ENST00000541586 FAM102BQ5T8I3 360 aa30.55■■■□□ 2.48
CCM2-218ENST00000541586 SEZ6LQ9BYH1 1024 aa30.55■■■□□ 2.48
CCM2-218ENST00000541586 PDLIM7Q9NR12 457 aa30.55■■■□□ 2.48
CCM2-218ENST00000541586 COL1A2P08123 1366 aa30.55■■■□□ 2.48
CCM2-218ENST00000541586 EIF3DO15371 548 aaKnown RBP eCLIP30.54■■■□□ 2.48
CCM2-218ENST00000541586 TPM3P06753 285 aa30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms