RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 STRA8Q7Z7C7 330 aa5.48□□□□□ -1.53
SNHG1-217ENST00000541578 KIF18BQ86Y91 864 aa5.48□□□□□ -1.53
SNHG1-217ENST00000541578 CERS3Q8IU89 383 aa5.48□□□□□ -1.53
SNHG1-217ENST00000541578 PASD1Q8IV76 773 aa5.48□□□□□ -1.53
SNHG1-217ENST00000541578 KIAA1958Q8N8K9 716 aa5.48□□□□□ -1.53
SNHG1-217ENST00000541578 MORC4Q8TE76 937 aa5.48□□□□□ -1.53
SNHG1-217ENST00000541578 KIAA1683Q9H0B3 1180 aa5.48□□□□□ -1.53
SNHG1-217ENST00000541578 KLC2Q9H0B6 622 aa5.48□□□□□ -1.53
SNHG1-217ENST00000541578 PUS7LQ9H0K6 701 aaKnown RBP5.48□□□□□ -1.53
SNHG1-217ENST00000541578 APOBEC2Q9Y235 224 aaKnown RBP5.48□□□□□ -1.53
SNHG1-217ENST00000541578 THRAP3Q9Y2W1 955 aaKnown RBP5.48□□□□□ -1.53
SNHG1-217ENST00000541578 E2F8A0AVK6 867 aa5.47□□□□□ -1.53
SNHG1-217ENST00000541578 C1QTNF3-AMACRE9PGA6 284 aa5.47□□□□□ -1.53
SNHG1-217ENST00000541578 GPR39O43194 453 aa5.47□□□□□ -1.53
SNHG1-217ENST00000541578 FOXS1O43638 330 aa5.47□□□□□ -1.53
SNHG1-217ENST00000541578 ZEB2O60315 1214 aa5.47□□□□□ -1.53
SNHG1-217ENST00000541578 KRT18P05783 430 aaKnown RBP5.47□□□□□ -1.53
SNHG1-217ENST00000541578 CR2P20023 1033 aa5.47□□□□□ -1.53
SNHG1-217ENST00000541578 MRE11P49959 708 aa5.47□□□□□ -1.53
SNHG1-217ENST00000541578 SLC6A3Q01959 620 aa5.47□□□□□ -1.53
SNHG1-217ENST00000541578 ROM1Q03395 351 aa5.47□□□□□ -1.53
SNHG1-217ENST00000541578 NFYCQ13952 458 aa5.47□□□□□ -1.53
SNHG1-217ENST00000541578 PUM1Q14671 1186 aaKnown RBP eCLIP5.47□□□□□ -1.53
SNHG1-217ENST00000541578 HS1BP3Q53T59 392 aa5.47□□□□□ -1.53
SNHG1-217ENST00000541578 AGBL4Q5VU57 503 aa5.47□□□□□ -1.53
SNHG1-217ENST00000541578 PPP4R4Q6NUP7 873 aa5.47□□□□□ -1.53
SNHG1-217ENST00000541578 USP30Q70CQ3 517 aa5.47□□□□□ -1.53
SNHG1-217ENST00000541578 NME9Q86XW9 330 aa5.47□□□□□ -1.53
SNHG1-217ENST00000541578 CHPFQ8IZ52 775 aa5.47□□□□□ -1.53
SNHG1-217ENST00000541578 CDK5RAP1Q96SZ6 601 aaKnown RBP5.47□□□□□ -1.53
SNHG1-217ENST00000541578 ORAI3Q9BRQ5 295 aa5.47□□□□□ -1.53
SNHG1-217ENST00000541578 OR10A2Q9H208 303 aa5.47□□□□□ -1.53
SNHG1-217ENST00000541578 C12orf65Q9H3J6 166 aaKnown RBP5.47□□□□□ -1.53
SNHG1-217ENST00000541578 OAZ3Q9UMX2 235 aa5.47□□□□□ -1.53
SNHG1-217ENST00000541578 TCAF1Q9Y4C2 921 aa5.47□□□□□ -1.53
SNHG1-217ENST00000541578 SMARCA4P51532 1647 aa5.46□□□□□ -1.54
SNHG1-217ENST00000541578 UBA6A0AVT1 1052 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-217ENST00000541578 GOLGA6CA6NDK9 693 aa5.46□□□□□ -1.54
SNHG1-217ENST00000541578 GOLGA6BA6NDN3 693 aa5.46□□□□□ -1.54
SNHG1-217ENST00000541578 TSPAN6O43657 245 aa5.46□□□□□ -1.54
SNHG1-217ENST00000541578 CAND2O75155 1236 aa5.46□□□□□ -1.54
SNHG1-217ENST00000541578 EYA4O95677 639 aa5.46□□□□□ -1.54
SNHG1-217ENST00000541578 GOLGA6DP0CG33 693 aa5.46□□□□□ -1.54
SNHG1-217ENST00000541578 SLC9A1P19634 815 aa5.46□□□□□ -1.54
SNHG1-217ENST00000541578 CCND1P24385 295 aa5.46□□□□□ -1.54
SNHG1-217ENST00000541578 OCRLQ01968 901 aa5.46□□□□□ -1.54
SNHG1-217ENST00000541578 ADCY1Q08828 1119 aa5.46□□□□□ -1.54
SNHG1-217ENST00000541578 MTMR1Q13613 665 aa5.46□□□□□ -1.54
SNHG1-217ENST00000541578 EPHA7Q15375 998 aa5.46□□□□□ -1.54
SNHG1-217ENST00000541578 NFE2Q16621 373 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-217ENST00000541578 TBR1Q16650 682 aa5.46□□□□□ -1.54
SNHG1-217ENST00000541578 TTC38Q5R3I4 469 aa5.46□□□□□ -1.54
SNHG1-217ENST00000541578 SLFN12LQ6IEE8 588 aa5.46□□□□□ -1.54
SNHG1-217ENST00000541578 CCSAPQ6IQ19 270 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-217ENST00000541578 Q8TCH9 128 aa5.46□□□□□ -1.54
SNHG1-217ENST00000541578 TSR2Q969E8 191 aaKnown RBP5.46□□□□□ -1.54
SNHG1-217ENST00000541578 MAML3Q96JK9 1138 aa5.46□□□□□ -1.54
SNHG1-217ENST00000541578 C16orf92Q96LL3 132 aa5.46□□□□□ -1.54
SNHG1-217ENST00000541578 WWC2-AS2Q96NR7 200 aa5.46□□□□□ -1.54
SNHG1-217ENST00000541578 TUBGCP5Q96RT8 1024 aa5.46□□□□□ -1.54
SNHG1-217ENST00000541578 ELF4Q99607 663 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-217ENST00000541578 ASPSCR1Q9BZE9 553 aa5.46□□□□□ -1.54
SNHG1-217ENST00000541578 SLC52A1Q9NWF4 448 aa5.46□□□□□ -1.54
SNHG1-217ENST00000541578 OXSMQ9NWU1 459 aa5.46□□□□□ -1.54
SNHG1-217ENST00000541578 GOLGA6AQ9NYA3 693 aa5.46□□□□□ -1.54
SNHG1-217ENST00000541578 PUF60Q9UHX1 559 aaKnown RBP5.46□□□□□ -1.54
SNHG1-217ENST00000541578 FAM184BQ9ULE4 1060 aa5.46□□□□□ -1.54
SNHG1-217ENST00000541578 ZFR2Q9UPR6 939 aaKnown RBP5.46□□□□□ -1.54
SNHG1-217ENST00000541578 TSC22D4Q9Y3Q8 395 aa5.46□□□□□ -1.54
SNHG1-217ENST00000541578 MRC2Q9UBG0 1479 aa5.45□□□□□ -1.54
SNHG1-217ENST00000541578 SHTN1A0MZ66 631 aa5.45□□□□□ -1.54
SNHG1-217ENST00000541578 CDC14BO60729 498 aa5.45□□□□□ -1.54
SNHG1-217ENST00000541578 SCGB1D2O95969 90 aa5.45□□□□□ -1.54
SNHG1-217ENST00000541578 F2P00734 622 aa5.45□□□□□ -1.54
SNHG1-217ENST00000541578 PRLP01236 227 aa5.45□□□□□ -1.54
SNHG1-217ENST00000541578 ATP2A2P16615 1042 aaKnown RBP5.45□□□□□ -1.54
SNHG1-217ENST00000541578 PTX3P26022 381 aaPredicted RBP5.45□□□□□ -1.54
SNHG1-217ENST00000541578 RGS3P49796 1198 aa5.45□□□□□ -1.54
SNHG1-217ENST00000541578 SELENOPP49908 381 aa5.45□□□□□ -1.54
SNHG1-217ENST00000541578 STAT5BP51692 787 aa5.45□□□□□ -1.54
SNHG1-217ENST00000541578 HDAC1Q13547 482 aaPredicted RBP5.45□□□□□ -1.54
SNHG1-217ENST00000541578 ZNF585AQ6P3V2 769 aa5.45□□□□□ -1.54
SNHG1-217ENST00000541578 MYO1HQ8N1T3 1032 aa5.45□□□□□ -1.54
SNHG1-217ENST00000541578 CHMP4CQ96CF2 233 aa5.45□□□□□ -1.54
SNHG1-217ENST00000541578 DPYSL5Q9BPU6 564 aa5.45□□□□□ -1.54
SNHG1-217ENST00000541578 MTFR1LQ9H019 292 aa5.45□□□□□ -1.54
SNHG1-217ENST00000541578 SEMA4AQ9H3S1 761 aa5.45□□□□□ -1.54
SNHG1-217ENST00000541578 TOMM22Q9NS69 142 aa5.45□□□□□ -1.54
SNHG1-217ENST00000541578 ZIM2Q9NZV7 527 aa5.45□□□□□ -1.54
SNHG1-217ENST00000541578 SAE1Q9UBE0 346 aaPredicted RBP5.45□□□□□ -1.54
SNHG1-217ENST00000541578 VWA7Q9Y334 891 aa5.45□□□□□ -1.54
SNHG1-217ENST00000541578 SPEF1Q9Y4P9 236 aa5.45□□□□□ -1.54
SNHG1-217ENST00000541578 SPO11Q9Y5K1 396 aa5.45□□□□□ -1.54
SNHG1-217ENST00000541578 PHLDB1Q86UU1 1377 aa5.44□□□□□ -1.54
SNHG1-217ENST00000541578 MATN2O00339 956 aa5.44□□□□□ -1.54
SNHG1-217ENST00000541578 RAD17O75943 681 aa5.44□□□□□ -1.54
SNHG1-217ENST00000541578 RAB27AP51159 221 aa5.44□□□□□ -1.54
SNHG1-217ENST00000541578 SESN2P58004 480 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-217ENST00000541578 MCL1Q07820 350 aa5.44□□□□□ -1.54
SNHG1-217ENST00000541578 FAPQ12884 760 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms