RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 USP6P35125 1406 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 PTPDC1A2A3K4 754 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 TRIM64A6NGJ6 449 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 TRIM64BA6NI03 449 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 GOLGA8AA7E2F4 631 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 GOLGA8BA8MQT2 603 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 MAFO75444 373 aaPredicted RBP6.27□□□□□ -1.41
DDB1-219ENST00000541513 ESRRAP11474 423 aaPredicted RBP6.27□□□□□ -1.41
DDB1-219ENST00000541513 MYCLP12524 364 aaPredicted RBP6.27□□□□□ -1.41
DDB1-219ENST00000541513 MYF5P13349 255 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 AKR1B1P15121 316 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 PDCP20941 246 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 CD247P20963 164 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 LORP23490 312 aaPredicted RBP6.27□□□□□ -1.41
DDB1-219ENST00000541513 IL12RB1P42701 662 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 MTNR1BP49286 362 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 YARSP54577 528 aaKnown RBP6.27□□□□□ -1.41
DDB1-219ENST00000541513 DRG2P55039 364 aaKnown RBP6.27□□□□□ -1.41
DDB1-219ENST00000541513 ZNF543Q08ER8 600 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 GALNT1Q10472 559 aaPredicted RBP6.27□□□□□ -1.41
DDB1-219ENST00000541513 STARD3Q14849 445 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 ARHGAP44Q17R89 818 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 NBPF9Q3BBW0 867 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 C6orf118Q5T5N4 469 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 APOA5Q6Q788 366 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 RTL10Q7L3V2 364 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 OTOP1Q7RTM1 612 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 OVCH1Q7RTY7 1134 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 ADAT2Q7Z6V5 191 aaKnown RBP6.27□□□□□ -1.41
DDB1-219ENST00000541513 MTDHQ86UE4 582 aaKnown RBP6.27□□□□□ -1.41
DDB1-219ENST00000541513 SYTL1Q8IYJ3 562 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 FLCNQ8NFG4 579 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 OR8H1Q8NGG4 311 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.27□□□□□ -1.41
DDB1-219ENST00000541513 POP1Q99575 1024 aaKnown RBP6.27□□□□□ -1.41
DDB1-219ENST00000541513 ADPGKQ9BRR6 497 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 KLF16Q9BXK1 252 aaPredicted RBP6.27□□□□□ -1.41
DDB1-219ENST00000541513 VPS45Q9NRW7 570 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 OLA1Q9NTK5 396 aaKnown RBP6.27□□□□□ -1.41
DDB1-219ENST00000541513 SEL1LQ9UBV2 794 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 CGGBP1Q9UFW8 167 aaPredicted RBP6.27□□□□□ -1.41
DDB1-219ENST00000541513 PA2G4Q9UQ80 394 aaKnown RBP6.27□□□□□ -1.41
DDB1-219ENST00000541513 ZNF451Q9Y4E5 1061 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 PCDHA8Q9Y5H6 950 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 ANKRD36BQ8N2N9 1353 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 CCDC7Q96M83 1385 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 ABCA3Q99758 1704 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 KIF20BQ96Q89 1820 aa6.27□□□□□ -1.41
DDB1-219ENST00000541513 MED1Q15648 1581 aaPredicted RBP6.27□□□□□ -1.41
DDB1-219ENST00000541513 USP19O94966 1318 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 KIF7Q2M1P5 1343 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 TNS3Q68CZ2 1445 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 SSH2Q76I76 1423 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 ANKRD26Q9UPS8 1709 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 MARF1Q9Y4F3 1742 aaKnown RBP6.26□□□□□ -1.41
DDB1-219ENST00000541513 LOC102724428A0A0B4J2F2 783 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 SPDYE3A6NKU9 549 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 B4DLN1 442 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 C11orf95C9JLR9 678 aaPredicted RBP6.26□□□□□ -1.41
DDB1-219ENST00000541513 H7C0S8 307 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 WNT9AO14904 365 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 SHOXO15266 292 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 P4HA2O15460 535 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 EFSO43281 561 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 DTNBO60941 627 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 CLEC3AO75596 197 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 PARP1P09874 1014 aaKnown RBP6.26□□□□□ -1.41
DDB1-219ENST00000541513 FAM157BP0CG42 384 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 MTHFD1P11586 935 aaKnown RBP6.26□□□□□ -1.41
DDB1-219ENST00000541513 CKMT1AP12532 417 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 FOSL1P15407 271 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 TSHRP16473 764 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 XBP1P17861 261 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 NFKB1P19838 968 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 MX2P20592 715 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 MUTP22033 750 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 HTR1BP28222 390 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 LSP1P33241 339 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 HSPA1LP34931 641 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 NPTX2P47972 431 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 PAPOLAP51003 745 aaKnown RBP6.26□□□□□ -1.41
DDB1-219ENST00000541513 MAPK10P53779 464 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 SIK1P57059 783 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 GPR85P60893 370 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 TLE2Q04725 743 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 NNTQ13423 1086 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 PKN2Q16513 984 aaKnown RBP6.26□□□□□ -1.41
DDB1-219ENST00000541513 PGS1Q32NB8 556 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 ZACNQ401N2 412 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 FBXO47Q5MNV8 452 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 DCAF15Q66K64 600 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 CPLX2Q6PUV4 134 aaKnown RBP6.26□□□□□ -1.41
DDB1-219ENST00000541513 TTLL7Q6ZT98 887 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 USP53Q70EK8 1073 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 MAEAQ7L5Y9 396 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 DHX32Q7L7V1 743 aaKnown RBP6.26□□□□□ -1.41
DDB1-219ENST00000541513 KRT28Q7Z3Y7 464 aa6.26□□□□□ -1.41
DDB1-219ENST00000541513 MCATQ8IVS2 390 aaKnown RBP6.26□□□□□ -1.41
DDB1-219ENST00000541513 ZC3H7AQ8IWR0 971 aaKnown RBP6.26□□□□□ -1.41
DDB1-219ENST00000541513 CCDC144CPQ8IYA2 1237 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms