RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 EFCAB12Q6NXP0 572 aa13.39□□□□□ -0.27
COPA-205ENST00000541366 MIS18BP1Q6P0N0 1132 aa13.39□□□□□ -0.27
COPA-205ENST00000541366 CASC1Q6TDU7 716 aa13.39□□□□□ -0.27
COPA-205ENST00000541366 CCDC149Q6ZUS6 474 aa13.39□□□□□ -0.27
COPA-205ENST00000541366 OTOP3Q7RTS5 596 aa13.39□□□□□ -0.27
COPA-205ENST00000541366 PLA2G4DQ86XP0 818 aa13.39□□□□□ -0.27
COPA-205ENST00000541366 LINC01465Q8N7H1 131 aa13.39□□□□□ -0.27
COPA-205ENST00000541366 BBXQ8WY36 941 aaPredicted RBP13.39□□□□□ -0.27
COPA-205ENST00000541366 CNTNAP3BQ96NU0 1288 aa13.39□□□□□ -0.27
COPA-205ENST00000541366 CNTNAP3Q9BZ76 1288 aa13.39□□□□□ -0.27
COPA-205ENST00000541366 CA14Q9ULX7 337 aa13.39□□□□□ -0.27
COPA-205ENST00000541366 MAFBQ9Y5Q3 323 aaPredicted RBP13.39□□□□□ -0.27
COPA-205ENST00000541366 ACACBO00763 2458 aa13.38□□□□□ -0.27
COPA-205ENST00000541366 SSBP05455 408 aaKnown RBP eCLIP13.38□□□□□ -0.27
COPA-205ENST00000541366 CTSAP10619 480 aa13.38□□□□□ -0.27
COPA-205ENST00000541366 SREBF1P36956 1147 aa13.38□□□□□ -0.27
COPA-205ENST00000541366 GPC3P51654 580 aa13.38□□□□□ -0.27
COPA-205ENST00000541366 PTPN14Q15678 1187 aa13.38□□□□□ -0.27
COPA-205ENST00000541366 SPECC1Q5M775 1068 aa13.38□□□□□ -0.27
COPA-205ENST00000541366 DDX53Q86TM3 631 aaKnown RBP13.38□□□□□ -0.27
COPA-205ENST00000541366 MICU3Q86XE3 530 aa13.38□□□□□ -0.27
COPA-205ENST00000541366 FANCBQ8NB91 859 aa13.38□□□□□ -0.27
COPA-205ENST00000541366 ST13P5Q8NFI4 369 aaPredicted RBP13.38□□□□□ -0.27
COPA-205ENST00000541366 IGSF21Q96ID5 467 aa13.38□□□□□ -0.27
COPA-205ENST00000541366 MAP7D2Q96T17 732 aa13.38□□□□□ -0.27
COPA-205ENST00000541366 HINFPQ9BQA5 517 aa13.38□□□□□ -0.27
COPA-205ENST00000541366 GBP3Q9H0R5 595 aa13.38□□□□□ -0.27
COPA-205ENST00000541366 NRDE2Q9H7Z3 1164 aa13.38□□□□□ -0.27
COPA-205ENST00000541366 GABBR1Q9UBS5 961 aa13.38□□□□□ -0.27
COPA-205ENST00000541366 DNAJB4Q9UDY4 337 aa13.38□□□□□ -0.27
COPA-205ENST00000541366 RBM8AQ9Y5S9 174 aaKnown RBP13.38□□□□□ -0.27
COPA-205ENST00000541366 IRAK3Q9Y616 596 aa13.38□□□□□ -0.27
COPA-205ENST00000541366 CNTNAP5Q8WYK1 1306 aa13.38□□□□□ -0.27
COPA-205ENST00000541366 WDR81Q562E7 1941 aa13.37□□□□□ -0.27
COPA-205ENST00000541366 KMT2BQ9UMN6 2715 aaPredicted RBP13.37□□□□□ -0.27
COPA-205ENST00000541366 IGLV3-22A0A075B6J6 115 aa13.37□□□□□ -0.27
COPA-205ENST00000541366 IPO5O00410 1097 aaKnown RBP13.37□□□□□ -0.27
COPA-205ENST00000541366 DCNP07585 359 aaKnown RBP13.37□□□□□ -0.27
COPA-205ENST00000541366 GALTP07902 379 aa13.37□□□□□ -0.27
COPA-205ENST00000541366 DARSP14868 501 aaKnown RBP13.37□□□□□ -0.27
COPA-205ENST00000541366 DRP2Q13474 957 aa13.37□□□□□ -0.27
COPA-205ENST00000541366 BMS1Q14692 1282 aaKnown RBP13.37□□□□□ -0.27
COPA-205ENST00000541366 LETM2Q2VYF4 491 aa13.37□□□□□ -0.27
COPA-205ENST00000541366 TTC22Q5TAA0 569 aa13.37□□□□□ -0.27
COPA-205ENST00000541366 MAP4K1Q92918 833 aa13.37□□□□□ -0.27
COPA-205ENST00000541366 SCLT1Q96NL6 688 aa13.37□□□□□ -0.27
COPA-205ENST00000541366 KLHL5Q96PQ7 755 aa13.37□□□□□ -0.27
COPA-205ENST00000541366 MRPL9Q9BYD2 267 aaKnown RBP13.37□□□□□ -0.27
COPA-205ENST00000541366 SFXN1Q9H9B4 322 aa13.37□□□□□ -0.27
COPA-205ENST00000541366 TBC1D17Q9HA65 648 aa13.37□□□□□ -0.27
COPA-205ENST00000541366 TBC1D13Q9NVG8 400 aa13.37□□□□□ -0.27
COPA-205ENST00000541366 INPP5FQ9Y2H2 1132 aa13.37□□□□□ -0.27
COPA-205ENST00000541366 DOCK8Q8NF50 2099 aa13.36□□□□□ -0.27
COPA-205ENST00000541366 SMCO2A6NFE2 343 aa13.36□□□□□ -0.27
COPA-205ENST00000541366 SGSM2O43147 1006 aa13.36□□□□□ -0.27
COPA-205ENST00000541366 ZNF862O60290 1169 aa13.36□□□□□ -0.27
COPA-205ENST00000541366 FOSP01100 380 aaPredicted RBP13.36□□□□□ -0.27
COPA-205ENST00000541366 CNPP09543 421 aaKnown RBP13.36□□□□□ -0.27
COPA-205ENST00000541366 KLRC2P26717 231 aa13.36□□□□□ -0.27
COPA-205ENST00000541366 SLC11A1P49279 550 aa13.36□□□□□ -0.27
COPA-205ENST00000541366 CLK2P49760 499 aaKnown RBP13.36□□□□□ -0.27
COPA-205ENST00000541366 CLCN4P51793 760 aa13.36□□□□□ -0.27
COPA-205ENST00000541366 ADCY7P51828 1080 aa13.36□□□□□ -0.27
COPA-205ENST00000541366 POLGP54098 1239 aaPredicted RBP13.36□□□□□ -0.27
COPA-205ENST00000541366 PUM1Q14671 1186 aaKnown RBP eCLIP13.36□□□□□ -0.27
COPA-205ENST00000541366 JAKMIP3Q5VZ66 844 aa13.36□□□□□ -0.27
COPA-205ENST00000541366 ZNF280BQ86YH2 543 aa13.36□□□□□ -0.27
COPA-205ENST00000541366 RUFY2Q8WXA3 655 aa13.36□□□□□ -0.27
COPA-205ENST00000541366 ZNF577Q9BSK1 485 aa13.36□□□□□ -0.27
COPA-205ENST00000541366 SLC12A7Q9Y666 1083 aa13.36□□□□□ -0.27
COPA-205ENST00000541366 FANCMQ8IYD8 2048 aa13.35□□□□□ -0.27
COPA-205ENST00000541366 CACNA1GO43497 2377 aa13.35□□□□□ -0.27
COPA-205ENST00000541366 POTEMA6NI47 508 aa13.35□□□□□ -0.27
COPA-205ENST00000541366 MAGEB2O15479 319 aa13.35□□□□□ -0.27
COPA-205ENST00000541366 SP9P0CG40 484 aa13.35□□□□□ -0.27
COPA-205ENST00000541366 CALM1P0DP23 149 aa13.35□□□□□ -0.27
COPA-205ENST00000541366 CALM2P0DP24 149 aa13.35□□□□□ -0.27
COPA-205ENST00000541366 CALM3P0DP25 149 aa13.35□□□□□ -0.27
COPA-205ENST00000541366 RFX1P22670 979 aa13.35□□□□□ -0.27
COPA-205ENST00000541366 GBP2P32456 591 aaPredicted RBP13.35□□□□□ -0.27
COPA-205ENST00000541366 MCM5P33992 734 aa13.35□□□□□ -0.27
COPA-205ENST00000541366 LIFRP42702 1097 aa13.35□□□□□ -0.27
COPA-205ENST00000541366 PHKA2P46019 1235 aa13.35□□□□□ -0.27
COPA-205ENST00000541366 FXR2P51116 673 aaKnown RBP eCLIP13.35□□□□□ -0.273e-10■■■■□ 20.2
COPA-205ENST00000541366 POTEGQ6S5H5 508 aa13.35□□□□□ -0.27
COPA-205ENST00000541366 NIPA1Q7RTP0 329 aa13.35□□□□□ -0.27
COPA-205ENST00000541366 TMTC2Q8N394 836 aa13.35□□□□□ -0.27
COPA-205ENST00000541366 SLC44A3Q8N4M1 653 aa13.35□□□□□ -0.27
COPA-205ENST00000541366 NLRP7Q8WX94 980 aa13.35□□□□□ -0.27
COPA-205ENST00000541366 CRYGNQ8WXF5 182 aa13.35□□□□□ -0.27
COPA-205ENST00000541366 TMEM87BQ96K49 555 aa13.35□□□□□ -0.27
COPA-205ENST00000541366 MYADMQ96S97 322 aa13.35□□□□□ -0.27
COPA-205ENST00000541366 DLL3Q9NYJ7 618 aa13.35□□□□□ -0.27
COPA-205ENST00000541366 IGSF9Q9P2J2 1179 aa13.35□□□□□ -0.27
COPA-205ENST00000541366 WNT16Q9UBV4 365 aa13.35□□□□□ -0.27
COPA-205ENST00000541366 PCDHA10Q9Y5I2 948 aa13.35□□□□□ -0.27
COPA-205ENST00000541366 V9GY48 417 aaPredicted RBP13.35□□□□□ -0.27
COPA-205ENST00000541366 C2CD2LO14523 706 aa13.34□□□□□ -0.27
COPA-205ENST00000541366 LILRB3O75022 631 aa13.34□□□□□ -0.27
COPA-205ENST00000541366 LRRN2O75325 713 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms