RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 PCDHA3Q9Y5H8 950 aa10.38□□□□□ -0.75
CNOT4-212ENST00000541284 NDUFAB1O14561 156 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 LRRN2O75325 713 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 FSBPO95073 299 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 FOSP01100 380 aaPredicted RBP10.37□□□□□ -0.75
CNOT4-212ENST00000541284 TMEM253P0C7T8 217 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 GRIPAP1Q4V328 841 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 C1orf220Q5T0J3 134 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 NLRP14Q86W24 1093 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 TEX2Q8IWB9 1127 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 PRPF38AQ8NAV1 312 aaKnown RBP10.37□□□□□ -0.75
CNOT4-212ENST00000541284 SLC35G2Q8TBE7 412 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 ALG3Q92685 438 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 TAF4BQ92750 862 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 DYDC2Q96IM9 177 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 STK33Q9BYT3 514 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 PI4KBQ9UBF8 816 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 PCDHB13Q9Y5F0 798 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 SHTN1A0MZ66 631 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 FERP16591 822 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 DRAP1Q14919 205 aaPredicted RBP10.37□□□□□ -0.75
CNOT4-212ENST00000541284 QPCTQ16769 361 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 FBXW10Q5XX13 1052 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 MCTP2Q6DN12 878 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 PHLDB3Q6NSJ2 640 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 ZDHHC24Q6UX98 284 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 TMEM179Q6ZVK1 233 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 ZNF720Q7Z2F6 126 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 PEX26Q7Z412 305 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 TLCD1Q96CP7 247 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 TRIM51Q9BSJ1 452 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 MKNK1Q9BUB5 465 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 ZC3H12CQ9C0D7 883 aaKnown RBP10.37□□□□□ -0.75
CNOT4-212ENST00000541284 AGPAT3Q9NRZ7 376 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 KRIT1O00522 736 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 MEFVO15553 781 aaPredicted RBP10.37□□□□□ -0.75
CNOT4-212ENST00000541284 PPFIA2O75334 1257 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 FAM107AO95990 144 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 GAP43P17677 238 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 KIF22Q14807 665 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 DUPD1Q68J44 220 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 FAM186BQ8IYM0 893 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 KCTD17Q8N5Z5 321 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 RFFLQ8WZ73 363 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 PDGFDQ9GZP0 370 aaPredicted RBP10.37□□□□□ -0.75
CNOT4-212ENST00000541284 FAM107BQ9H098 131 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 TUFT1Q9NNX1 390 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 GGA2Q9UJY4 613 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 PRR12Q9ULL5 1215 aa10.37□□□□□ -0.75
CNOT4-212ENST00000541284 C5orf60A6NFR6 353 aa10.36□□□□□ -0.75
CNOT4-212ENST00000541284 TRAPPC3O43617 180 aa10.36□□□□□ -0.75
CNOT4-212ENST00000541284 VIL1P09327 827 aaKnown RBP10.36□□□□□ -0.75
CNOT4-212ENST00000541284 VCAM1P19320 739 aa10.36□□□□□ -0.75
CNOT4-212ENST00000541284 PTENP60484 403 aa10.36□□□□□ -0.75
CNOT4-212ENST00000541284 TCEAL1Q15170 157 aa10.36□□□□□ -0.75
CNOT4-212ENST00000541284 ICE2Q659A1 982 aa10.36□□□□□ -0.75
CNOT4-212ENST00000541284 MICALL1Q8N3F8 863 aa10.36□□□□□ -0.75
CNOT4-212ENST00000541284 DBNDD1Q9H9R9 158 aa10.36□□□□□ -0.75
CNOT4-212ENST00000541284 DNAJC12Q9UKB3 198 aa10.36□□□□□ -0.75
CNOT4-212ENST00000541284 ERLIN2O94905 339 aa10.36□□□□□ -0.75
CNOT4-212ENST00000541284 TRIM49P0CI25 452 aa10.36□□□□□ -0.75
CNOT4-212ENST00000541284 TRIM49CP0CI26 452 aa10.36□□□□□ -0.75
CNOT4-212ENST00000541284 COPB2P35606 906 aa10.36□□□□□ -0.75
CNOT4-212ENST00000541284 STAT1P42224 750 aa10.36□□□□□ -0.75
CNOT4-212ENST00000541284 PTGIRP43119 386 aa10.36□□□□□ -0.75
CNOT4-212ENST00000541284 HADHBP55084 474 aaKnown RBP10.36□□□□□ -0.75
CNOT4-212ENST00000541284 IFI16Q16666 785 aaKnown RBP10.36□□□□□ -0.75
CNOT4-212ENST00000541284 TCERG1LQ5VWI1 586 aa10.36□□□□□ -0.75
CNOT4-212ENST00000541284 DAAM2Q86T65 1068 aa10.36□□□□□ -0.75
CNOT4-212ENST00000541284 INTS2Q9H0H0 1204 aaKnown RBP10.36□□□□□ -0.75
CNOT4-212ENST00000541284 THAP2Q9H0W7 228 aa10.36□□□□□ -0.75
CNOT4-212ENST00000541284 UBE4BO95155 1302 aa10.36□□□□□ -0.75
CNOT4-212ENST00000541284 RPL13P26373 211 aaKnown RBP10.36□□□□□ -0.75
CNOT4-212ENST00000541284 PSMC2P35998 433 aaKnown RBP10.36□□□□□ -0.75
CNOT4-212ENST00000541284 AGBL2Q5U5Z8 902 aa10.36□□□□□ -0.75
CNOT4-212ENST00000541284 AADACL2Q6P093 401 aa10.36□□□□□ -0.75
CNOT4-212ENST00000541284 PLEKHO2Q8TD55 490 aa10.36□□□□□ -0.75
CNOT4-212ENST00000541284 TMEM174Q8WUU8 243 aa10.36□□□□□ -0.75
CNOT4-212ENST00000541284 STK24Q9Y6E0 443 aa10.36□□□□□ -0.75
CNOT4-212ENST00000541284 TMOD1P28289 359 aa10.35□□□□□ -0.75
CNOT4-212ENST00000541284 HNRNPH1P31943 449 aaKnown RBP10.35□□□□□ -0.75
CNOT4-212ENST00000541284 DLG4P78352 724 aa10.35□□□□□ -0.75
CNOT4-212ENST00000541284 KIAA0825Q8IV33 1275 aa10.35□□□□□ -0.75
CNOT4-212ENST00000541284 SLC20A1Q8WUM9 679 aa10.35□□□□□ -0.75
CNOT4-212ENST00000541284 CYFIP2Q96F07 1278 aa10.35□□□□□ -0.75
CNOT4-212ENST00000541284 ADAM7Q9H2U9 754 aa10.35□□□□□ -0.75
CNOT4-212ENST00000541284 GRHL1Q9NZI5 618 aa10.35□□□□□ -0.75
CNOT4-212ENST00000541284 LTBP3Q9NS15 1303 aa10.35□□□□□ -0.75
CNOT4-212ENST00000541284 SPDYE3A6NKU9 549 aa10.35□□□□□ -0.75
CNOT4-212ENST00000541284 TBC1D12O60347 775 aa10.35□□□□□ -0.75
CNOT4-212ENST00000541284 APBA3O96018 575 aa10.35□□□□□ -0.75
CNOT4-212ENST00000541284 FGGP02679 453 aa10.35□□□□□ -0.75
CNOT4-212ENST00000541284 BMP3P12645 472 aa10.35□□□□□ -0.75
CNOT4-212ENST00000541284 HLTFQ14527 1009 aaKnown RBP eCLIP10.35□□□□□ -0.75
CNOT4-212ENST00000541284 ABCB5Q2M3G0 1257 aa10.35□□□□□ -0.75
CNOT4-212ENST00000541284 MMS22LQ6ZRQ5 1243 aa10.35□□□□□ -0.75
CNOT4-212ENST00000541284 MAATS1Q7Z4T9 603 aa10.35□□□□□ -0.75
CNOT4-212ENST00000541284 SLC9A9Q8IVB4 645 aa10.35□□□□□ -0.75
CNOT4-212ENST00000541284 APEX2Q9UBZ4 518 aa10.35□□□□□ -0.75
CNOT4-212ENST00000541284 ECE2O60344 883 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms