RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 CXorf67Q86X51 503 aaPredicted RBP8.49□□□□□ -1.05
YBX3-210ENST00000540975 FERMT2Q96AC1 680 aa8.49□□□□□ -1.05
YBX3-210ENST00000540975 WWC2-AS2Q96NR7 200 aa8.49□□□□□ -1.05
YBX3-210ENST00000540975 SOX7Q9BT81 388 aa8.49□□□□□ -1.05
YBX3-210ENST00000540975 OSBPL6Q9BZF3 934 aa8.49□□□□□ -1.05
YBX3-210ENST00000540975 TMPRSS11EQ9UL52 423 aa8.49□□□□□ -1.05
YBX3-210ENST00000540975 NUMBLQ9Y6R0 609 aa8.49□□□□□ -1.05
YBX3-210ENST00000540975 DAPK3O43293 454 aa8.48□□□□□ -1.05
YBX3-210ENST00000540975 KDM1AO60341 852 aa8.48□□□□□ -1.05
YBX3-210ENST00000540975 PFKMP08237 780 aa8.48□□□□□ -1.05
YBX3-210ENST00000540975 HNRNPLP14866 589 aaKnown RBP eCLIP8.48□□□□□ -1.05
YBX3-210ENST00000540975 CNGA1P29973 690 aa8.48□□□□□ -1.05
YBX3-210ENST00000540975 NFKB2Q00653 900 aa8.48□□□□□ -1.05
YBX3-210ENST00000540975 DUSP8Q13202 625 aa8.48□□□□□ -1.05
YBX3-210ENST00000540975 PDCD1Q15116 288 aa8.48□□□□□ -1.05
YBX3-210ENST00000540975 CLEC14AQ86T13 490 aa8.48□□□□□ -1.05
YBX3-210ENST00000540975 GCDHQ92947 438 aaPredicted RBP8.48□□□□□ -1.05
YBX3-210ENST00000540975 HIST1H2AHQ96KK5 128 aa8.48□□□□□ -1.05
YBX3-210ENST00000540975 HIST1H2AJQ99878 128 aa8.48□□□□□ -1.05
YBX3-210ENST00000540975 PLA2G12BQ9BX93 195 aa8.48□□□□□ -1.05
YBX3-210ENST00000540975 SLC6A15Q9H2J7 730 aa8.48□□□□□ -1.05
YBX3-210ENST00000540975 MSL2Q9HCI7 577 aa8.48□□□□□ -1.05
YBX3-210ENST00000540975 APOBEC2Q9Y235 224 aaKnown RBP8.48□□□□□ -1.05
YBX3-210ENST00000540975 RBM8AQ9Y5S9 174 aaKnown RBP8.48□□□□□ -1.05
YBX3-210ENST00000540975 ST20-MTHFSA0A0A6YYL1 179 aa8.47□□□□□ -1.05
YBX3-210ENST00000540975 SLC26A4O43511 780 aa8.47□□□□□ -1.05
YBX3-210ENST00000540975 MANFP55145 182 aaKnown RBP8.47□□□□□ -1.05
YBX3-210ENST00000540975 SESN3P58005 492 aa8.47□□□□□ -1.05
YBX3-210ENST00000540975 ADAM17P78536 824 aa8.47□□□□□ -1.05
YBX3-210ENST00000540975 STAT4Q14765 748 aa8.47□□□□□ -1.05
YBX3-210ENST00000540975 HDGFL2Q7Z4V5 671 aaPredicted RBP8.47□□□□□ -1.05
YBX3-210ENST00000540975 GPR135Q8IZ08 494 aa8.47□□□□□ -1.05
YBX3-210ENST00000540975 FUKQ8N0W3 1084 aa8.47□□□□□ -1.05
YBX3-210ENST00000540975 PLA2G15Q8NCC3 412 aa8.47□□□□□ -1.05
YBX3-210ENST00000540975 CLRN3Q8NCR9 226 aa8.47□□□□□ -1.05
YBX3-210ENST00000540975 PPP1R14CQ8TAE6 165 aa8.47□□□□□ -1.05
YBX3-210ENST00000540975 RABGGTAQ92696 567 aa8.47□□□□□ -1.05
YBX3-210ENST00000540975 SLC7A6OSQ96CW6 309 aaPredicted RBP8.47□□□□□ -1.05
YBX3-210ENST00000540975 C1QTNF3Q9BXJ4 246 aa8.47□□□□□ -1.05
YBX3-210ENST00000540975 KRTAP3-1Q9BYR8 98 aa8.47□□□□□ -1.05
YBX3-210ENST00000540975 DEF6Q9H4E7 631 aa8.47□□□□□ -1.05
YBX3-210ENST00000540975 AGO3Q9H9G7 860 aaKnown RBP8.47□□□□□ -1.05
YBX3-210ENST00000540975 TOPORSQ9NS56 1045 aaPredicted RBP8.47□□□□□ -1.05
YBX3-210ENST00000540975 USP18Q9UMW8 372 aa8.47□□□□□ -1.05
YBX3-210ENST00000540975 PCDHB6Q9Y5E3 794 aa8.47□□□□□ -1.05
YBX3-210ENST00000540975 RAD17O75943 681 aa8.46□□□□□ -1.06
YBX3-210ENST00000540975 ADRB1P08588 477 aa8.46□□□□□ -1.06
YBX3-210ENST00000540975 CPEP16870 476 aa8.46□□□□□ -1.06
YBX3-210ENST00000540975 POU3F3P20264 500 aaPredicted RBP8.46□□□□□ -1.06
YBX3-210ENST00000540975 RPS19P39019 145 aaKnown RBP8.46□□□□□ -1.06
YBX3-210ENST00000540975 MAN2A1Q16706 1144 aa8.46□□□□□ -1.06
YBX3-210ENST00000540975 CDYL2Q8N8U2 506 aa8.46□□□□□ -1.06
YBX3-210ENST00000540975 SHCBP1Q8NEM2 672 aa8.46□□□□□ -1.06
YBX3-210ENST00000540975 GAB3Q8WWW8 586 aa8.46□□□□□ -1.06
YBX3-210ENST00000540975 RPL10LQ96L21 214 aaKnown RBP8.46□□□□□ -1.06
YBX3-210ENST00000540975 NELFAQ9H3P2 528 aa8.46□□□□□ -1.06
YBX3-210ENST00000540975 SPC25Q9HBM1 224 aa8.46□□□□□ -1.06
YBX3-210ENST00000540975 PPP2R3BQ9Y5P8 575 aa8.46□□□□□ -1.06
YBX3-210ENST00000540975 CLEC2LP0C7M8 214 aa8.45□□□□□ -1.06
YBX3-210ENST00000540975 TCIRG1Q13488 830 aa8.45□□□□□ -1.06
YBX3-210ENST00000540975 SAFB2Q14151 953 aaKnown RBP eCLIP8.45□□□□□ -1.06
YBX3-210ENST00000540975 LHFPL2Q6ZUX7 228 aa8.45□□□□□ -1.06
YBX3-210ENST00000540975 LYSMD2Q8IV50 215 aa8.45□□□□□ -1.06
YBX3-210ENST00000540975 OR14A2Q96R54 314 aa8.45□□□□□ -1.06
YBX3-210ENST00000540975 FAM126AQ9BYI3 521 aaPredicted RBP8.45□□□□□ -1.06
YBX3-210ENST00000540975 WNT8AQ9H1J5 351 aa8.45□□□□□ -1.06
YBX3-210ENST00000540975 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.45□□□□□ -1.06
YBX3-210ENST00000540975 FSBPO95073 299 aa8.44□□□□□ -1.06
YBX3-210ENST00000540975 ZNF20P17024 532 aa8.44□□□□□ -1.06
YBX3-210ENST00000540975 GPR15P49685 360 aa8.44□□□□□ -1.06
YBX3-210ENST00000540975 BPIFB4P59827 614 aa8.44□□□□□ -1.06
YBX3-210ENST00000540975 KRTAP10-2P60368 255 aa8.44□□□□□ -1.06
YBX3-210ENST00000540975 CD69Q07108 199 aa8.44□□□□□ -1.06
YBX3-210ENST00000540975 RIN1Q13671 783 aa8.44□□□□□ -1.06
YBX3-210ENST00000540975 CT83Q5H943 113 aa8.44□□□□□ -1.06
YBX3-210ENST00000540975 ZNF585AQ6P3V2 769 aa8.44□□□□□ -1.06
YBX3-210ENST00000540975 ANKRD53Q8N9V6 530 aa8.44□□□□□ -1.06
YBX3-210ENST00000540975 RSAD2Q8WXG1 361 aa8.44□□□□□ -1.06
YBX3-210ENST00000540975 DVL3Q92997 716 aaPredicted RBP8.44□□□□□ -1.06
YBX3-210ENST00000540975 GPHA2Q96T91 129 aa8.44□□□□□ -1.06
YBX3-210ENST00000540975 KLC2Q9H0B6 622 aa8.44□□□□□ -1.06
YBX3-210ENST00000540975 VTA1Q9NP79 307 aa8.44□□□□□ -1.06
YBX3-210ENST00000540975 PLA2G3Q9NZ20 509 aa8.44□□□□□ -1.06
YBX3-210ENST00000540975 PRSS50Q9UI38 385 aa8.44□□□□□ -1.06
YBX3-210ENST00000540975 SLC30A1Q9Y6M5 507 aa8.44□□□□□ -1.06
YBX3-210ENST00000540975 GOLGA8BA8MQT2 603 aa8.43□□□□□ -1.06
YBX3-210ENST00000540975 DNAJC6O75061 913 aa8.43□□□□□ -1.06
YBX3-210ENST00000540975 GAAP10253 952 aa8.43□□□□□ -1.06
YBX3-210ENST00000540975 KIR2DL3P43628 341 aa8.43□□□□□ -1.06
YBX3-210ENST00000540975 ADAM8P78325 824 aa8.43□□□□□ -1.06
YBX3-210ENST00000540975 IQSEC1Q6DN90 963 aa8.43□□□□□ -1.06
YBX3-210ENST00000540975 CCDC62Q6P9F0 684 aa8.43□□□□□ -1.06
YBX3-210ENST00000540975 ZNF662Q6ZS27 426 aa8.43□□□□□ -1.06
YBX3-210ENST00000540975 SLC41A1Q8IVJ1 513 aa8.43□□□□□ -1.06
YBX3-210ENST00000540975 WDR66Q8TBY9 1149 aa8.43□□□□□ -1.06
YBX3-210ENST00000540975 KRTAP4-7Q9BYR0 210 aa8.43□□□□□ -1.06
YBX3-210ENST00000540975 PRDM12Q9H4Q4 367 aa8.43□□□□□ -1.06
YBX3-210ENST00000540975 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.43□□□□□ -1.06
YBX3-210ENST00000540975 JAG2Q9Y219 1238 aa8.43□□□□□ -1.06
YBX3-210ENST00000540975 GPR39O43194 453 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms