RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 A0A1B0GTH6 734 aa10.31□□□□□ -0.76
TTC39C-203ENST00000540918 ESYT2A0FGR8 921 aa10.31□□□□□ -0.76
TTC39C-203ENST00000540918 ATP2A1O14983 1001 aa10.31□□□□□ -0.76
TTC39C-203ENST00000540918 P4HA1P13674 534 aa10.31□□□□□ -0.76
TTC39C-203ENST00000540918 BMP6P22004 513 aa10.31□□□□□ -0.76
TTC39C-203ENST00000540918 NT5C2P49902 561 aa10.31□□□□□ -0.76
TTC39C-203ENST00000540918 PLTPP55058 493 aa10.31□□□□□ -0.76
TTC39C-203ENST00000540918 KCNB1Q14721 858 aa10.31□□□□□ -0.76
TTC39C-203ENST00000540918 GLRA4Q5JXX5 417 aa10.31□□□□□ -0.76
TTC39C-203ENST00000540918 HP1BP3Q5SSJ5 553 aaPredicted RBP10.31□□□□□ -0.76
TTC39C-203ENST00000540918 FAM117BQ6P1L5 589 aa10.31□□□□□ -0.76
TTC39C-203ENST00000540918 SRGAP1Q7Z6B7 1085 aa10.31□□□□□ -0.76
TTC39C-203ENST00000540918 NME8Q8N427 588 aa10.31□□□□□ -0.76
TTC39C-203ENST00000540918 OR6J1Q8NGC5 347 aa10.31□□□□□ -0.76
TTC39C-203ENST00000540918 GMCL1Q96IK5 515 aa10.31□□□□□ -0.76
TTC39C-203ENST00000540918 FERMT1Q9BQL6 677 aa10.31□□□□□ -0.76
TTC39C-203ENST00000540918 CCDC94Q9BW85 323 aaPredicted RBP10.31□□□□□ -0.76
TTC39C-203ENST00000540918 PARD6BQ9BYG5 372 aa10.31□□□□□ -0.76
TTC39C-203ENST00000540918 SEMA6BQ9H3T3 888 aa10.31□□□□□ -0.76
TTC39C-203ENST00000540918 TCP1P17987 556 aaKnown RBP10.3□□□□□ -0.76
TTC39C-203ENST00000540918 FXR2P51116 673 aaKnown RBP eCLIP10.3□□□□□ -0.76
TTC39C-203ENST00000540918 KRT81Q14533 505 aa10.3□□□□□ -0.76
TTC39C-203ENST00000540918 CDCA5Q96FF9 252 aa10.3□□□□□ -0.76
TTC39C-203ENST00000540918 CAMKK2Q96RR4 588 aa10.3□□□□□ -0.76
TTC39C-203ENST00000540918 BPIFA3Q9BQP9 254 aa10.3□□□□□ -0.76
TTC39C-203ENST00000540918 INTS2Q9H0H0 1204 aaKnown RBP10.3□□□□□ -0.76
TTC39C-203ENST00000540918 KLHL11Q9NVR0 708 aa10.3□□□□□ -0.76
TTC39C-203ENST00000540918 KCNG1Q9UIX4 513 aa10.3□□□□□ -0.76
TTC39C-203ENST00000540918 LRRD1A4D1F6 860 aa10.3□□□□□ -0.76
TTC39C-203ENST00000540918 VWA5AO00534 786 aa10.3□□□□□ -0.76
TTC39C-203ENST00000540918 HEXIM1O94992 359 aaKnown RBP10.3□□□□□ -0.76
TTC39C-203ENST00000540918 TFRCP02786 760 aaKnown RBP10.3□□□□□ -0.76
TTC39C-203ENST00000540918 FTLP02792 175 aaPredicted RBP10.3□□□□□ -0.76
TTC39C-203ENST00000540918 ZSCAN20P17040 1043 aaPredicted RBP10.3□□□□□ -0.76
TTC39C-203ENST00000540918 SLCO1A2P46721 670 aa10.3□□□□□ -0.76
TTC39C-203ENST00000540918 SYCP2LQ5T4T6 812 aa10.3□□□□□ -0.76
TTC39C-203ENST00000540918 CBWD2Q8IUF1 395 aa10.3□□□□□ -0.76
TTC39C-203ENST00000540918 CTAGE3PQ8IX95 158 aa10.3□□□□□ -0.76
TTC39C-203ENST00000540918 PNMA5Q96PV4 448 aa10.3□□□□□ -0.76
TTC39C-203ENST00000540918 FAM118BQ9BPY3 351 aa10.3□□□□□ -0.76
TTC39C-203ENST00000540918 ANAPC7Q9UJX3 599 aa10.3□□□□□ -0.76
TTC39C-203ENST00000540918 PPP1R11O60927 126 aaPredicted RBP10.3□□□□□ -0.76
TTC39C-203ENST00000540918 RNF8O76064 485 aa10.3□□□□□ -0.76
TTC39C-203ENST00000540918 PTPRAP18433 802 aa10.3□□□□□ -0.76
TTC39C-203ENST00000540918 SREBF1P36956 1147 aa10.3□□□□□ -0.76
TTC39C-203ENST00000540918 NCAPHQ15003 741 aa10.3□□□□□ -0.76
TTC39C-203ENST00000540918 PPP6R3Q5H9R7 873 aaPredicted RBP10.3□□□□□ -0.76
TTC39C-203ENST00000540918 CEP85LQ5SZL2 805 aa10.3□□□□□ -0.76
TTC39C-203ENST00000540918 FMNL3Q8IVF7 1028 aa10.3□□□□□ -0.76
TTC39C-203ENST00000540918 CCDC89Q8N998 374 aa10.3□□□□□ -0.76
TTC39C-203ENST00000540918 GPRC5AQ8NFJ5 357 aa10.3□□□□□ -0.76
TTC39C-203ENST00000540918 FBXO41Q8TF61 875 aa10.3□□□□□ -0.76
TTC39C-203ENST00000540918 RNF25Q96BH1 459 aaPredicted RBP10.3□□□□□ -0.76
TTC39C-203ENST00000540918 CCDC97Q96F63 343 aaPredicted RBP10.3□□□□□ -0.76
TTC39C-203ENST00000540918 MS4A14Q96JA4 679 aa10.3□□□□□ -0.76
TTC39C-203ENST00000540918 MOV10L1Q9BXT6 1211 aaKnown RBP10.3□□□□□ -0.76
TTC39C-203ENST00000540918 MIS12Q9H081 205 aa10.3□□□□□ -0.76
TTC39C-203ENST00000540918 VPS37BQ9H9H4 285 aa10.3□□□□□ -0.76
TTC39C-203ENST00000540918 EHD2Q9NZN4 543 aa10.3□□□□□ -0.76
TTC39C-203ENST00000540918 FNDC3AQ9Y2H6 1198 aaKnown RBP10.3□□□□□ -0.76
TTC39C-203ENST00000540918 FGGP02679 453 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 ATP1A1P05023 1023 aaKnown RBP10.29□□□□□ -0.76
TTC39C-203ENST00000540918 WEE2P0C1S8 567 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 CIITAP33076 1130 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 EMC2Q15006 297 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 XKR3Q5GH77 459 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 ZNF667Q5HYK9 610 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 GNASQ5JWF2 1037 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 FBXO38Q6PIJ6 1188 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 RSRC2Q7L4I2 434 aaKnown RBP10.29□□□□□ -0.76
TTC39C-203ENST00000540918 CEP57Q86XR8 500 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 ANKRD42Q8N9B4 389 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 COPS5Q92905 334 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 NAP1L3Q99457 506 aaPredicted RBP10.29□□□□□ -0.76
TTC39C-203ENST00000540918 CCDC77Q9BR77 488 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 PLCD4Q9BRC7 762 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 GPRC5DQ9NZD1 345 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 CNOT8Q9UFF9 292 aaKnown RBP10.29□□□□□ -0.76
TTC39C-203ENST00000540918 EFCAB8A8MWE9 144 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 OPA1O60313 960 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 FGFR4P22455 802 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 SNRNP35Q16560 246 aaKnown RBP10.29□□□□□ -0.76
TTC39C-203ENST00000540918 WHAMMP3Q1A5X7 153 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 ZNF699Q32M78 642 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 CYP4F22Q6NT55 531 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 FAM83AQ86UY5 434 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 ERO1BQ86YB8 467 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 GPR161Q8N6U8 529 aaKnown RBP10.29□□□□□ -0.76
TTC39C-203ENST00000540918 JPH2Q9BR39 696 aaPredicted RBP10.29□□□□□ -0.76
TTC39C-203ENST00000540918 DNAJC18Q9H819 358 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 TOPORSQ9NS56 1045 aaPredicted RBP10.29□□□□□ -0.76
TTC39C-203ENST00000540918 KBTBD4Q9NVX7 518 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 RAB20Q9NX57 234 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 KLK14Q9P0G3 267 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 ADAM22Q9P0K1 906 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 LIMA1Q9UHB6 759 aaKnown RBP10.29□□□□□ -0.76
TTC39C-203ENST00000540918 UCHL3P15374 230 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 FUT2Q10981 343 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 AMHR2Q16671 573 aa10.29□□□□□ -0.76
TTC39C-203ENST00000540918 EFCAB12Q6NXP0 572 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms