RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 SPATA33Q96N06 139 aa13.45□□□□□ -0.26
AP003559.1-201ENST00000540906 GANQ9H2C0 597 aa13.45□□□□□ -0.26
AP003559.1-201ENST00000540906 KMT5AQ9NQR1 393 aa13.45□□□□□ -0.26
AP003559.1-201ENST00000540906 ABT1Q9ULW3 272 aaKnown RBP13.45□□□□□ -0.26
AP003559.1-201ENST00000540906 TBX20Q9UMR3 447 aa13.45□□□□□ -0.26
AP003559.1-201ENST00000540906 DIS3Q9Y2L1 958 aaKnown RBP13.45□□□□□ -0.26
AP003559.1-201ENST00000540906 SIP14410 1827 aa13.45□□□□□ -0.26
AP003559.1-201ENST00000540906 ZSWIM8A7E2V4 1837 aa13.44□□□□□ -0.26
AP003559.1-201ENST00000540906 A0A1W2PQJ5 194 aa13.44□□□□□ -0.26
AP003559.1-201ENST00000540906 RBAK-RBAKDNI3L0D1 243 aa13.44□□□□□ -0.26
AP003559.1-201ENST00000540906 ADCY6O43306 1168 aa13.44□□□□□ -0.26
AP003559.1-201ENST00000540906 NRDCO43847 1150 aa13.44□□□□□ -0.26
AP003559.1-201ENST00000540906 PLEKP08567 350 aaPredicted RBP13.44□□□□□ -0.26
AP003559.1-201ENST00000540906 SLC10A3P09131 477 aa13.44□□□□□ -0.26
AP003559.1-201ENST00000540906 GLRA2P23416 452 aa13.44□□□□□ -0.26
AP003559.1-201ENST00000540906 POLGP54098 1239 aaPredicted RBP13.44□□□□□ -0.26
AP003559.1-201ENST00000540906 DLG4P78352 724 aa13.44□□□□□ -0.26
AP003559.1-201ENST00000540906 DMP1Q13316 513 aaPredicted RBP13.44□□□□□ -0.26
AP003559.1-201ENST00000540906 MKRN4PQ13434 485 aaPredicted RBP13.44□□□□□ -0.26
AP003559.1-201ENST00000540906 PLCB4Q15147 1175 aa13.44□□□□□ -0.26
AP003559.1-201ENST00000540906 MEA1Q16626 185 aa13.44□□□□□ -0.26
AP003559.1-201ENST00000540906 HS2ST1Q7LGA3 356 aa13.44□□□□□ -0.26
AP003559.1-201ENST00000540906 PLEKHH3Q7Z736 793 aa13.44□□□□□ -0.26
AP003559.1-201ENST00000540906 SLC9A9Q8IVB4 645 aa13.44□□□□□ -0.26
AP003559.1-201ENST00000540906 ABRAQ8N0Z2 381 aa13.44□□□□□ -0.26
AP003559.1-201ENST00000540906 RETREG2Q8NC44 543 aa13.44□□□□□ -0.26
AP003559.1-201ENST00000540906 TRAPPC12Q8WVT3 735 aa13.44□□□□□ -0.26
AP003559.1-201ENST00000540906 SPIRE2Q8WWL2 714 aa13.44□□□□□ -0.26
AP003559.1-201ENST00000540906 KIFAP3Q92845 792 aa13.44□□□□□ -0.26
AP003559.1-201ENST00000540906 MAML3Q96JK9 1138 aa13.44□□□□□ -0.26
AP003559.1-201ENST00000540906 MPHOSPH6Q99547 160 aaKnown RBP13.44□□□□□ -0.26
AP003559.1-201ENST00000540906 NUP58Q9BVL2 599 aa13.44□□□□□ -0.26
AP003559.1-201ENST00000540906 NAA15Q9BXJ9 866 aaKnown RBP13.44□□□□□ -0.26
AP003559.1-201ENST00000540906 NLRC4Q9NPP4 1024 aa13.44□□□□□ -0.26
AP003559.1-201ENST00000540906 RBM47A0AV96 593 aaKnown RBP13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 GOLGA8IPA6NC78 632 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 LRRC53A6NM62 1247 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 GOLGA8JA6NMD2 632 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 AFPP02771 609 aaKnown RBP13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 ADRB2P07550 413 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 PSMC2P35998 433 aaKnown RBP13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 ARL2P36404 184 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 C1orf220Q5T0J3 134 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 TCERG1LQ5VWI1 586 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 TRIM65Q6PJ69 517 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 PAXIP1Q6ZW49 1069 aaPredicted RBP13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 MAP4K3Q8IVH8 894 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 MCPH1Q8NEM0 835 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 NTPCRQ9BSD7 190 aaKnown RBP13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 SIX2Q9NPC8 291 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 HSPBP1Q9NZL4 362 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 FAM184BQ9ULE4 1060 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 TFR2Q9UP52 801 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 IVNS1ABPQ9Y6Y0 642 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 ZNF236Q9UL36 1845 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 LOC102724159A0A0B4J2E5 919 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 STRNO43815 780 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 TLR2O60603 784 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 EXOC3O60645 756 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 XRCC5P13010 732 aaKnown RBP13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 ALCAMQ13740 583 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 TTLL4Q14679 1199 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 PWP2Q15269 919 aaKnown RBP13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 TAF1CQ15572 869 aaPredicted RBP13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 PTPN14Q15678 1187 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 CBWD6Q4V339 395 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 CBWD3Q5JTY5 395 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 CBWD5Q5RIA9 395 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 FAM160B1Q5W0V3 765 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 PDXDC1Q6P996 788 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 KCNV1Q6PIU1 500 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 CYP26C1Q6V0L0 522 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 DPP9Q86TI2 863 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 TMTC1Q8IUR5 882 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 NEK11Q8NG66 645 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 SCFD2Q8WU76 684 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 GLG1Q92896 1179 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 SAAL1Q96ER3 474 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 MKNK1Q9BUB5 465 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 TMEM206Q9H813 350 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 FLRT1Q9NZU1 646 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 ARHGAP28Q9P2N2 729 aa13.43□□□□□ -0.26
AP003559.1-201ENST00000540906 MANSC4A6NHS7 340 aaPredicted RBP13.42□□□□□ -0.26
AP003559.1-201ENST00000540906 NOP56O00567 594 aaKnown RBP13.42□□□□□ -0.26
AP003559.1-201ENST00000540906 LRRN2O75325 713 aa13.42□□□□□ -0.26
AP003559.1-201ENST00000540906 PON1P27169 355 aa13.42□□□□□ -0.26
AP003559.1-201ENST00000540906 CTGFP29279 349 aa13.42□□□□□ -0.26
AP003559.1-201ENST00000540906 RTP1P59025 263 aa13.42□□□□□ -0.26
AP003559.1-201ENST00000540906 POLR2FP61218 127 aaKnown RBP13.42□□□□□ -0.26
AP003559.1-201ENST00000540906 MAPK8IP2Q13387 824 aaPredicted RBP13.42□□□□□ -0.26
AP003559.1-201ENST00000540906 PRAMEF19Q5SWL8 479 aa13.42□□□□□ -0.26
AP003559.1-201ENST00000540906 MORN1Q5T089 497 aa13.42□□□□□ -0.26
AP003559.1-201ENST00000540906 GJB7Q6PEY0 223 aa13.42□□□□□ -0.26
AP003559.1-201ENST00000540906 RRAGAQ7L523 313 aa13.42□□□□□ -0.26
AP003559.1-201ENST00000540906 ZNF467Q7Z7K2 595 aaPredicted RBP13.42□□□□□ -0.26
AP003559.1-201ENST00000540906 IFNL1Q8IU54 200 aa13.42□□□□□ -0.26
AP003559.1-201ENST00000540906 C12orf56Q8IXR9 622 aa13.42□□□□□ -0.26
AP003559.1-201ENST00000540906 ZNF592Q92610 1267 aa13.42□□□□□ -0.26
AP003559.1-201ENST00000540906 IRX2Q9BZI1 471 aaPredicted RBP13.42□□□□□ -0.26
AP003559.1-201ENST00000540906 METTL14Q9HCE5 456 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms