RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 TCF7P36402 384 aaPredicted RBP7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 NLRP12P59046 1061 aa7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 RAD51AP2Q09MP3 1159 aa7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 DPYDQ12882 1025 aa7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 NR6A1Q15406 480 aa7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 DUSP28Q4G0W2 176 aa7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 XKR9Q5GH70 373 aa7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 TMEM63BQ5T3F8 832 aa7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 CCDC62Q6P9F0 684 aa7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 KCNK18Q7Z418 384 aa7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 SYT2Q8N9I0 419 aaPredicted RBP7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 OR6J1Q8NGC5 347 aa7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 LRRC15Q8TF66 581 aa7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 COPS5Q92905 334 aa7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 GSDMAQ96QA5 445 aa7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 C7orf25Q9BPX7 421 aa7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 AP5M1Q9H0R1 490 aa7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 ZHX3Q9H4I2 956 aa7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 NRBP2Q9NSY0 501 aa7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 BLOC1S4Q9NUP1 217 aa7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 EXOC1Q9NV70 894 aa7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 ANO10Q9NW15 660 aa7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 MAN1B1Q9UKM7 699 aa7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 FAM184BQ9ULE4 1060 aa7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 LCTP09848 1927 aa7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 GSTTP1A0A1W2PQM5 241 aa7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 MYMKA6NI61 221 aa7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 ZBTB39O15060 712 aa7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 TBCAO75347 108 aaKnown RBP7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 ATG7O95352 703 aa7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 MYCP01106 439 aaPredicted RBP7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 INHAP05111 366 aa7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 CYP11B2P19099 503 aa7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 STAT5BP51692 787 aa7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 SLC12A3P55017 1021 aa7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 CHMP4BP1P59074 171 aa7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 PTSQ03393 145 aa7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 CACNB2Q08289 660 aaPredicted RBP7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 UGCGQ16739 394 aa7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 HSDL1Q3SXM5 330 aa7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 ANO6Q4KMQ2 910 aa7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 BRDTQ58F21 947 aaPredicted RBP7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 XKR3Q5GH77 459 aa7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 GJC2Q5T442 439 aaPredicted RBP7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 L1TD1Q5T7N2 865 aaKnown RBP7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 CCDC60Q8IWA6 550 aaPredicted RBP7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 CCDC65Q8IXS2 484 aa7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 C4orf19Q8IY42 314 aa7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 TRIML1Q8N9V2 468 aa7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 RNF214Q8ND24 703 aa7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 AFG1LQ8WV93 481 aa7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 NANOS1Q8WY41 292 aaKnown RBP7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 GPR20Q99678 358 aa7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 TRIM9Q9C026 710 aa7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 KATNBL1Q9H079 304 aa7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 DNAJC25Q9H1X3 360 aa7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 SMARCAD1Q9H4L7 1026 aa7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 ANKEF1Q9NU02 776 aa7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 PANK4Q9NVE7 773 aa7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 WRAP73Q9P2S5 460 aaPredicted RBP7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 NRBP1Q9UHY1 535 aa7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 TUBE1Q9UJT0 475 aa7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 DBR1Q9UK59 544 aaKnown RBP7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 TELO2Q9Y4R8 837 aa7.37□□□□□ -1.23
CLTCL1-206ENST00000540896 NPHP3-ACAD11A0A0J9YXS1 232 aa7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 PVALEFA0A1B0GWK0 134 aa7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 FIGNL2A6NMB9 653 aa7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 BECN2A8MW95 431 aa7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 PPFIA4O75335 1185 aa7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 FAM13AO94988 1023 aa7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 LYPLA2O95372 231 aa7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 CAVIN2O95810 425 aa7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 ZNF865P0CJ78 1059 aaPredicted RBP7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 PTGS1P23219 599 aa7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 MARK3P27448 753 aa7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 CCND3P30281 292 aaPredicted RBP7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 SARSP49591 514 aaKnown RBP7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 ZNF165P49910 485 aa7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 PRKCEQ02156 737 aa7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 ARHGAP1Q07960 439 aa7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 STIM1Q13586 685 aa7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 MORC3Q14149 939 aa7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 MTFR1Q15390 333 aa7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 HERC4Q5GLZ8 1057 aaPredicted RBP7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 MAP3K21Q5TCX8 1036 aa7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 NT5DC1Q5TFE4 455 aa7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 RINT1Q6NUQ1 792 aa7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 MAEAQ7L5Y9 396 aa7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 PLPPR4Q7Z2D5 763 aa7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 MLKLQ8NB16 471 aa7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 TRPV1Q8NER1 839 aa7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 PPTC7Q8NI37 304 aa7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 ADAM32Q8TC27 787 aa7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 ARMC5Q96C12 935 aa7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 FAM167AQ96KS9 214 aa7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 CEP170P1Q96L14 293 aa7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 SH2D3AQ9BRG2 576 aa7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 GTPBP4Q9BZE4 634 aaKnown RBP7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 SPC25Q9HBM1 224 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms