RNA–Protein interactions for RNA: ENST00000540797.5

USP3-204, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2 BASIC

Gene USP3, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-204ENST00000540797 PPP6R3Q5H9R7 873 aaPredicted RBP15.14■□□□□ 0.01
USP3-204ENST00000540797 GANCQ8TET4 914 aa15.14■□□□□ 0.01
USP3-204ENST00000540797 ACAP3Q96P50 834 aa15.14■□□□□ 0.01
USP3-204ENST00000540797 TRIM56Q9BRZ2 755 aaKnown RBP15.14■□□□□ 0.01
USP3-204ENST00000540797 ADGRB1O14514 1584 aa15.14■□□□□ 0.01
USP3-204ENST00000540797 UBE4BO95155 1302 aa15.14■□□□□ 0.01
USP3-204ENST00000540797 TBX3O15119 743 aa15.14■□□□□ 0.01
USP3-204ENST00000540797 CTSHP09668 335 aa15.14■□□□□ 0.01
USP3-204ENST00000540797 SHC4Q6S5L8 630 aa15.14■□□□□ 0.01
USP3-204ENST00000540797 BZW1Q7L1Q6 419 aaKnown RBP15.14■□□□□ 0.01
USP3-204ENST00000540797 TTC39CQ8N584 583 aa15.14■□□□□ 0.01
USP3-204ENST00000540797 NCAPGQ9BPX3 1015 aa15.14■□□□□ 0.01
USP3-204ENST00000540797 FER1L4A9Z1Z3 1794 aa15.14■□□□□ 0.01
USP3-204ENST00000540797 M0QYV0 167 aa15.14■□□□□ 0.01
USP3-204ENST00000540797 STXBP3O00186 592 aa15.14■□□□□ 0.01
USP3-204ENST00000540797 ZBED1O96006 694 aa15.14■□□□□ 0.01
USP3-204ENST00000540797 RWDD2BP57060 319 aa15.14■□□□□ 0.01
USP3-204ENST00000540797 DUOXA2Q1HG44 320 aa15.14■□□□□ 0.01
USP3-204ENST00000540797 NXNQ6DKJ4 435 aa15.14■□□□□ 0.01
USP3-204ENST00000540797 TMEM143Q96AN5 459 aa15.14■□□□□ 0.01
USP3-204ENST00000540797 ZDHHC15Q96MV8 337 aa15.14■□□□□ 0.01
USP3-204ENST00000540797 INTS2Q9H0H0 1204 aaKnown RBP15.14■□□□□ 0.01
USP3-204ENST00000540797 DONSONQ9NYP3 566 aa15.14■□□□□ 0.01
USP3-204ENST00000540797 CAP2P40123 477 aa15.14■□□□□ 0.01
USP3-204ENST00000540797 AP3M2P53677 418 aa15.14■□□□□ 0.01
USP3-204ENST00000540797 ANTXR2P58335 489 aa15.14■□□□□ 0.01
USP3-204ENST00000540797 MXD4Q14582 209 aaPredicted RBP15.14■□□□□ 0.01
USP3-204ENST00000540797 ZNF560Q96MR9 790 aa15.14■□□□□ 0.01
USP3-204ENST00000540797 UBN1Q9NPG3 1134 aa15.14■□□□□ 0.01
USP3-204ENST00000540797 RNF14Q9UBS8 474 aa15.14■□□□□ 0.01
USP3-204ENST00000540797 A8MXQ7 604 aa15.13■□□□□ 0.01
USP3-204ENST00000540797 CALB1P05937 261 aa15.13■□□□□ 0.01
USP3-204ENST00000540797 RARBP10826 455 aa15.13■□□□□ 0.01
USP3-204ENST00000540797 THOC5Q13769 683 aaKnown RBP15.13■□□□□ 0.01
USP3-204ENST00000540797 CCHCR1Q8TD31 782 aa15.13■□□□□ 0.01
USP3-204ENST00000540797 SH2D3AQ9BRG2 576 aa15.13■□□□□ 0.01
USP3-204ENST00000540797 PIDD1Q9HB75 910 aa15.13■□□□□ 0.01
USP3-204ENST00000540797 SMYD2Q9NRG4 433 aa15.13■□□□□ 0.01
USP3-204ENST00000540797 NMT1P30419 496 aaKnown RBP15.13■□□□□ 0.01
USP3-204ENST00000540797 PLTPP55058 493 aa15.13■□□□□ 0.01
USP3-204ENST00000540797 ANAPC7Q9UJX3 599 aa15.13■□□□□ 0.01
USP3-204ENST00000540797 STRIP2Q9ULQ0 834 aa15.13■□□□□ 0.01
USP3-204ENST00000540797 FAM205CA6NFA0 338 aa15.13■□□□□ 0.01
USP3-204ENST00000540797 SPDYE2BA6NHP3 402 aa15.13■□□□□ 0.01
USP3-204ENST00000540797 SPDYE6P0CI01 402 aa15.13■□□□□ 0.01
USP3-204ENST00000540797 CPB1P15086 417 aa15.13■□□□□ 0.01
USP3-204ENST00000540797 SEPT6Q14141 434 aa15.13■□□□□ 0.01
USP3-204ENST00000540797 SCFD2Q8WU76 684 aa15.13■□□□□ 0.01
USP3-204ENST00000540797 PARD3BQ8TEW8 1205 aa15.13■□□□□ 0.01
USP3-204ENST00000540797 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.13■□□□□ 0.01
USP3-204ENST00000540797 ASNSD1Q9NWL6 643 aa15.13■□□□□ 0.01
USP3-204ENST00000540797 NPHP3-ACAD11A0A0J9YXS1 232 aa15.13■□□□□ 0.01
USP3-204ENST00000540797 RNF219Q5W0B1 726 aaPredicted RBP15.13■□□□□ 0.01
USP3-204ENST00000540797 TEX2Q8IWB9 1127 aa15.13■□□□□ 0.01
USP3-204ENST00000540797 ARHGEF2Q92974 986 aaKnown RBP15.13■□□□□ 0.01
USP3-204ENST00000540797 MAP3K14Q99558 947 aa15.13■□□□□ 0.01
USP3-204ENST00000540797 EPB41L5Q9HCM4 733 aa15.13■□□□□ 0.01
USP3-204ENST00000540797 FBXO2Q9UK22 296 aaPredicted RBP15.13■□□□□ 0.01
USP3-204ENST00000540797 GOLGA8KD6RF30 607 aa15.12■□□□□ 0.01
USP3-204ENST00000540797 MAGEB2O15479 319 aa15.12■□□□□ 0.01
USP3-204ENST00000540797 ZNF500O60304 480 aaPredicted RBP15.12■□□□□ 0.01
USP3-204ENST00000540797 KCNJ6P48051 423 aa15.12■□□□□ 0.01
USP3-204ENST00000540797 MAP7Q14244 749 aa15.12■□□□□ 0.01
USP3-204ENST00000540797 ARHGAP24Q8N264 748 aa15.12■□□□□ 0.01
USP3-204ENST00000540797 MXRA8Q9BRK3 442 aa15.12■□□□□ 0.01
USP3-204ENST00000540797 C11orf70Q9BRQ4 267 aa15.12■□□□□ 0.01
USP3-204ENST00000540797 MTIF3Q9H2K0 278 aaKnown RBP15.12■□□□□ 0.01
USP3-204ENST00000540797 LRRC53A6NM62 1247 aa15.12■□□□□ 0.01
USP3-204ENST00000540797 STK25O00506 426 aa15.12■□□□□ 0.01
USP3-204ENST00000540797 TRIM49P0CI25 452 aa15.12■□□□□ 0.01
USP3-204ENST00000540797 TRIM49CP0CI26 452 aa15.12■□□□□ 0.01
USP3-204ENST00000540797 FCGRTP55899 365 aa15.12■□□□□ 0.01
USP3-204ENST00000540797 CXCL9Q07325 125 aa15.12■□□□□ 0.01
USP3-204ENST00000540797 SEMA3FQ13275 785 aa15.12■□□□□ 0.01
USP3-204ENST00000540797 IER5Q5VY09 327 aa15.12■□□□□ 0.01
USP3-204ENST00000540797 CYP4F22Q6NT55 531 aa15.12■□□□□ 0.01
USP3-204ENST00000540797 GDAP1Q8TB36 358 aa15.12■□□□□ 0.01
USP3-204ENST00000540797 AFG1LQ8WV93 481 aa15.12■□□□□ 0.01
USP3-204ENST00000540797 CCSER1Q9C0I3 900 aa15.12■□□□□ 0.01
USP3-204ENST00000540797 SMARCA1P28370 1054 aa15.12■□□□□ 0.01
USP3-204ENST00000540797 ADORA2BP29275 332 aa15.12■□□□□ 0.01
USP3-204ENST00000540797 GNA15P30679 374 aa15.12■□□□□ 0.01
USP3-204ENST00000540797 ATP11AP98196 1134 aa15.12■□□□□ 0.01
USP3-204ENST00000540797 NFIAQ12857 509 aa15.12■□□□□ 0.01
USP3-204ENST00000540797 MAPK8IP2Q13387 824 aaPredicted RBP15.12■□□□□ 0.01
USP3-204ENST00000540797 TRIP13Q15645 432 aaPredicted RBP15.12■□□□□ 0.01
USP3-204ENST00000540797 LRRC31Q6UY01 552 aa15.12■□□□□ 0.01
USP3-204ENST00000540797 MMP14P50281 582 aa15.12■□□□□ 0.01
USP3-204ENST00000540797 PSMD6Q15008 389 aa15.12■□□□□ 0.01
USP3-204ENST00000540797 SMAP1Q8IYB5 467 aaPredicted RBP15.12■□□□□ 0.01
USP3-204ENST00000540797 ANGPTL3Q9Y5C1 460 aa15.12■□□□□ 0.01
USP3-204ENST00000540797 MAP3K20Q9NYL2 800 aaKnown RBP15.11■□□□□ 0.01
USP3-204ENST00000540797 TMEM131LA2VDJ0 1609 aa15.11■□□□□ 0.01
USP3-204ENST00000540797 EMSYQ7Z589 1322 aa15.11■□□□□ 0.01
USP3-204ENST00000540797 MAFGO15525 162 aa15.11■□□□□ 0.01
USP3-204ENST00000540797 NFKBIAP25963 317 aa15.11■□□□□ 0.01
USP3-204ENST00000540797 GPC5P78333 572 aa15.11■□□□□ 0.01
USP3-204ENST00000540797 ERO1BQ86YB8 467 aa15.11■□□□□ 0.01
USP3-204ENST00000540797 HDAC11Q96DB2 347 aa15.11■□□□□ 0.01
USP3-204ENST00000540797 SENP2Q9HC62 589 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms