RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 NPEPPSP55786 919 aa11.75□□□□□ -0.53
ATL3-204ENST00000540699 SMAD3P84022 425 aaKnown RBP11.75□□□□□ -0.53
ATL3-204ENST00000540699 MGAT3Q09327 533 aa11.75□□□□□ -0.53
ATL3-204ENST00000540699 GPNMBQ14956 572 aa11.75□□□□□ -0.53
ATL3-204ENST00000540699 ZRSR1Q15695 479 aaKnown RBP11.75□□□□□ -0.53
ATL3-204ENST00000540699 MTERF2Q49AM1 385 aa11.75□□□□□ -0.53
ATL3-204ENST00000540699 PLA2G4FQ68DD2 849 aa11.75□□□□□ -0.53
ATL3-204ENST00000540699 CNNM4Q6P4Q7 775 aa11.75□□□□□ -0.53
ATL3-204ENST00000540699 POTEGQ6S5H5 508 aa11.75□□□□□ -0.53
ATL3-204ENST00000540699 LRRC8DQ7L1W4 858 aa11.75□□□□□ -0.53
ATL3-204ENST00000540699 KIAA0319LQ8IZA0 1049 aa11.75□□□□□ -0.53
ATL3-204ENST00000540699 NME8Q8N427 588 aa11.75□□□□□ -0.53
ATL3-204ENST00000540699 LARP4BQ92615 738 aaKnown RBP11.75□□□□□ -0.53
ATL3-204ENST00000540699 ZBTB10Q96DT7 871 aa11.75□□□□□ -0.53
ATL3-204ENST00000540699 CDX2Q99626 313 aaPredicted RBP11.75□□□□□ -0.53
ATL3-204ENST00000540699 PPP1R12CQ9BZL4 782 aa11.75□□□□□ -0.53
ATL3-204ENST00000540699 TRIM9Q9C026 710 aa11.75□□□□□ -0.53
ATL3-204ENST00000540699 BLZF1Q9H2G9 400 aa11.75□□□□□ -0.53
ATL3-204ENST00000540699 SEMA6BQ9H3T3 888 aa11.75□□□□□ -0.53
ATL3-204ENST00000540699 DHX33Q9H6R0 707 aaKnown RBP11.75□□□□□ -0.53
ATL3-204ENST00000540699 CHD7Q9P2D1 2997 aa11.75□□□□□ -0.53
ATL3-204ENST00000540699 CXCL10P02778 98 aa11.74□□□□□ -0.53
ATL3-204ENST00000540699 THPOP40225 353 aa11.74□□□□□ -0.53
ATL3-204ENST00000540699 TBC1D8BQ0IIM8 1120 aa11.74□□□□□ -0.53
ATL3-204ENST00000540699 MKRN4PQ13434 485 aaPredicted RBP11.74□□□□□ -0.53
ATL3-204ENST00000540699 MCM6Q14566 821 aa11.74□□□□□ -0.53
ATL3-204ENST00000540699 MBTPS1Q14703 1052 aa11.74□□□□□ -0.53
ATL3-204ENST00000540699 XKR9Q5GH70 373 aa11.74□□□□□ -0.53
ATL3-204ENST00000540699 ZNF618Q5T7W0 954 aa11.74□□□□□ -0.53
ATL3-204ENST00000540699 TRMT1LQ7Z2T5 733 aaKnown RBP11.74□□□□□ -0.53
ATL3-204ENST00000540699 RSPH3Q86UC2 560 aa11.74□□□□□ -0.53
ATL3-204ENST00000540699 DHX40Q8IX18 779 aaKnown RBP11.74□□□□□ -0.53
ATL3-204ENST00000540699 EXOC8Q8IYI6 725 aa11.74□□□□□ -0.53
ATL3-204ENST00000540699 ZNF710Q8N1W2 664 aa11.74□□□□□ -0.53
ATL3-204ENST00000540699 TMEM199Q8N511 208 aa11.74□□□□□ -0.53
ATL3-204ENST00000540699 RETREG2Q8NC44 543 aa11.74□□□□□ -0.53
ATL3-204ENST00000540699 PIGOQ8TEQ8 1089 aa11.74□□□□□ -0.53
ATL3-204ENST00000540699 DNAJB3Q8WWF6 145 aa11.74□□□□□ -0.53
ATL3-204ENST00000540699 CDK5RAP3Q96JB5 506 aa11.74□□□□□ -0.53
ATL3-204ENST00000540699 CEP170P1Q96L14 293 aa11.74□□□□□ -0.53
ATL3-204ENST00000540699 RNPC3Q96LT9 517 aaKnown RBP11.74□□□□□ -0.53
ATL3-204ENST00000540699 JPH2Q9BR39 696 aaPredicted RBP11.74□□□□□ -0.53
ATL3-204ENST00000540699 TTYH1Q9H313 450 aaPredicted RBP11.74□□□□□ -0.53
ATL3-204ENST00000540699 PRDM6Q9NQX0 595 aa11.74□□□□□ -0.53
ATL3-204ENST00000540699 KIAA1024Q9UPX6 916 aa11.74□□□□□ -0.53
ATL3-204ENST00000540699 GBF1Q92538 1859 aa11.74□□□□□ -0.53
ATL3-204ENST00000540699 MYO9BQ13459 2157 aa11.74□□□□□ -0.53
ATL3-204ENST00000540699 MYMKA6NI61 221 aa11.73□□□□□ -0.53
ATL3-204ENST00000540699 RSPH10B2B2RC85 870 aa11.73□□□□□ -0.53
ATL3-204ENST00000540699 E9PMD0 336 aa11.73□□□□□ -0.53
ATL3-204ENST00000540699 GAS2O43903 313 aaKnown RBP11.73□□□□□ -0.53
ATL3-204ENST00000540699 CHRNA1P02708 482 aa11.73□□□□□ -0.53
ATL3-204ENST00000540699 RPN1P04843 607 aaKnown RBP11.73□□□□□ -0.53
ATL3-204ENST00000540699 PFKMP08237 780 aa11.73□□□□□ -0.53
ATL3-204ENST00000540699 RSPH10BP0C881 870 aa11.73□□□□□ -0.53
ATL3-204ENST00000540699 CCL23P55773 120 aa11.73□□□□□ -0.53
ATL3-204ENST00000540699 MRPS6P82932 125 aaKnown RBP11.73□□□□□ -0.53
ATL3-204ENST00000540699 MUC3AQ02505 3323 aa11.73□□□□□ -0.53
ATL3-204ENST00000540699 FPGSQ05932 587 aa11.73□□□□□ -0.53
ATL3-204ENST00000540699 PTPRSQ13332 1948 aa11.73□□□□□ -0.53
ATL3-204ENST00000540699 KCNB1Q14721 858 aa11.73□□□□□ -0.53
ATL3-204ENST00000540699 ISM2Q6H9L7 571 aa11.73□□□□□ -0.53
ATL3-204ENST00000540699 EFCAB12Q6NXP0 572 aa11.73□□□□□ -0.53
ATL3-204ENST00000540699 SV2BQ7L1I2 683 aa11.73□□□□□ -0.53
ATL3-204ENST00000540699 LUZP1Q86V48 1076 aa11.73□□□□□ -0.53
ATL3-204ENST00000540699 SH2D3AQ9BRG2 576 aa11.73□□□□□ -0.53
ATL3-204ENST00000540699 IL23AQ9NPF7 189 aa11.73□□□□□ -0.53
ATL3-204ENST00000540699 SQORQ9Y6N5 450 aa11.73□□□□□ -0.53
ATL3-204ENST00000540699 NBNO60934 754 aa11.72□□□□□ -0.53
ATL3-204ENST00000540699 DGAT1O75907 488 aa11.72□□□□□ -0.53
ATL3-204ENST00000540699 RHOBTB3O94955 611 aa11.72□□□□□ -0.53
ATL3-204ENST00000540699 EYA4O95677 639 aa11.72□□□□□ -0.53
ATL3-204ENST00000540699 PLA2G4BP0C869 781 aa11.72□□□□□ -0.53
ATL3-204ENST00000540699 CSF2RAP15509 400 aa11.72□□□□□ -0.53
ATL3-204ENST00000540699 TMOD1P28289 359 aa11.72□□□□□ -0.53
ATL3-204ENST00000540699 CLCN3P51790 818 aa11.72□□□□□ -0.53
ATL3-204ENST00000540699 SLC12A3P55017 1021 aa11.72□□□□□ -0.53
ATL3-204ENST00000540699 AMPD3Q01432 767 aa11.72□□□□□ -0.53
ATL3-204ENST00000540699 EHHADHQ08426 723 aa11.72□□□□□ -0.53
ATL3-204ENST00000540699 PPIGQ13427 754 aaKnown RBP eCLIP11.72□□□□□ -0.53
ATL3-204ENST00000540699 DRP2Q13474 957 aa11.72□□□□□ -0.53
ATL3-204ENST00000540699 NCAPHQ15003 741 aa11.72□□□□□ -0.53
ATL3-204ENST00000540699 EMC2Q15006 297 aa11.72□□□□□ -0.53
ATL3-204ENST00000540699 CT47A1Q5JQC4 288 aaPredicted RBP11.72□□□□□ -0.53
ATL3-204ENST00000540699 IER5Q5VY09 327 aa11.72□□□□□ -0.53
ATL3-204ENST00000540699 C16orf59Q7L2K0 433 aa11.72□□□□□ -0.53
ATL3-204ENST00000540699 LRRC71Q8N4P6 559 aa11.72□□□□□ -0.53
ATL3-204ENST00000540699 METTL13Q8N6R0 699 aa11.72□□□□□ -0.53
ATL3-204ENST00000540699 MLKLQ8NB16 471 aa11.72□□□□□ -0.53
ATL3-204ENST00000540699 SLC7A3Q8WY07 619 aa11.72□□□□□ -0.53
ATL3-204ENST00000540699 SCLYQ96I15 445 aa11.72□□□□□ -0.53
ATL3-204ENST00000540699 NAT10Q9H0A0 1025 aaKnown RBP11.72□□□□□ -0.53
ATL3-204ENST00000540699 FAM49AQ9H0Q0 323 aaPredicted RBP11.72□□□□□ -0.53
ATL3-204ENST00000540699 XPNPEP1Q9NQW7 623 aa11.72□□□□□ -0.53
ATL3-204ENST00000540699 RMND1Q9NWS8 449 aa11.72□□□□□ -0.53
ATL3-204ENST00000540699 DNM3Q9UQ16 869 aa11.72□□□□□ -0.53
ATL3-204ENST00000540699 TRPV2Q9Y5S1 764 aa11.72□□□□□ -0.53
ATL3-204ENST00000540699 CDY2AQ9Y6F7 541 aa11.72□□□□□ -0.53
ATL3-204ENST00000540699 REV3LO60673 3130 aa11.72□□□□□ -0.53
ATL3-204ENST00000540699 TTC28Q96AY4 2481 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms