RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 ZNF543Q08ER8 600 aa12.14□□□□□ -0.47
CPT1A-206ENST00000540367 SLC29A2Q14542 456 aa12.14□□□□□ -0.47
CPT1A-206ENST00000540367 ACCSLQ4AC99 568 aa12.14□□□□□ -0.47
CPT1A-206ENST00000540367 ZNF804AQ7Z570 1209 aa12.14□□□□□ -0.47
CPT1A-206ENST00000540367 ADAT2Q7Z6V5 191 aaKnown RBP12.14□□□□□ -0.47
CPT1A-206ENST00000540367 TCP11Q8WWU5 503 aa12.14□□□□□ -0.47
CPT1A-206ENST00000540367 RSRC1Q96IZ7 334 aaKnown RBP12.14□□□□□ -0.47
CPT1A-206ENST00000540367 PRMT1Q99873 361 aaKnown RBP12.14□□□□□ -0.47
CPT1A-206ENST00000540367 ELAC2Q9BQ52 826 aaKnown RBP12.14□□□□□ -0.47
CPT1A-206ENST00000540367 REEP2Q9BRK0 252 aa12.14□□□□□ -0.47
CPT1A-206ENST00000540367 GRHL1Q9NZI5 618 aa12.14□□□□□ -0.47
CPT1A-206ENST00000540367 SNX24Q9Y343 169 aa12.14□□□□□ -0.47
CPT1A-206ENST00000540367 ZNF831Q5JPB2 1677 aa12.13□□□□□ -0.47
CPT1A-206ENST00000540367 FOCADQ5VW36 1801 aa12.13□□□□□ -0.47
CPT1A-206ENST00000540367 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.13□□□□□ -0.47
CPT1A-206ENST00000540367 CLTAP09496 248 aa12.13□□□□□ -0.47
CPT1A-206ENST00000540367 GBP1P32455 592 aa12.13□□□□□ -0.47
CPT1A-206ENST00000540367 STAT3P40763 770 aa12.13□□□□□ -0.47
CPT1A-206ENST00000540367 SATB1Q01826 763 aa12.13□□□□□ -0.47
CPT1A-206ENST00000540367 BTNL9Q6UXG8 535 aa12.13□□□□□ -0.47
CPT1A-206ENST00000540367 MAB21L3Q8N8X9 362 aa12.13□□□□□ -0.47
CPT1A-206ENST00000540367 STAMBPL1Q96FJ0 436 aa12.13□□□□□ -0.47
CPT1A-206ENST00000540367 FAXDC2Q96IV6 333 aa12.13□□□□□ -0.47
CPT1A-206ENST00000540367 SYT11Q9BT88 431 aa12.13□□□□□ -0.47
CPT1A-206ENST00000540367 MTFR1LQ9H019 292 aa12.13□□□□□ -0.47
CPT1A-206ENST00000540367 STMN4Q9H169 189 aaPredicted RBP12.13□□□□□ -0.47
CPT1A-206ENST00000540367 PSTPIP2Q9H939 334 aa12.13□□□□□ -0.47
CPT1A-206ENST00000540367 SMIM23A6NLE4 172 aa12.13□□□□□ -0.47
CPT1A-206ENST00000540367 PPP1R12BO60237 982 aaPredicted RBP12.13□□□□□ -0.47
CPT1A-206ENST00000540367 PHF2O75151 1096 aa12.13□□□□□ -0.47
CPT1A-206ENST00000540367 VIMP08670 466 aaKnown RBP12.13□□□□□ -0.47
CPT1A-206ENST00000540367 RPSAP08865 295 aaKnown RBP12.13□□□□□ -0.47
CPT1A-206ENST00000540367 VCAM1P19320 739 aa12.13□□□□□ -0.47
CPT1A-206ENST00000540367 ABCB4P21439 1286 aa12.13□□□□□ -0.47
CPT1A-206ENST00000540367 CALRP27797 417 aaKnown RBP12.13□□□□□ -0.47
CPT1A-206ENST00000540367 PTGIRP43119 386 aa12.13□□□□□ -0.47
CPT1A-206ENST00000540367 RHBDL3P58872 404 aa12.13□□□□□ -0.47
CPT1A-206ENST00000540367 ZNF211Q13398 564 aaPredicted RBP12.13□□□□□ -0.47
CPT1A-206ENST00000540367 ZNF268Q14587 947 aaPredicted RBP12.13□□□□□ -0.47
CPT1A-206ENST00000540367 FAM133BQ5BKY9 247 aaKnown RBP12.13□□□□□ -0.47
CPT1A-206ENST00000540367 TNFAIP8L3Q5GJ75 292 aa12.13□□□□□ -0.47
CPT1A-206ENST00000540367 TBC1D1Q86TI0 1168 aaPredicted RBP12.13□□□□□ -0.47
CPT1A-206ENST00000540367 PNMA8AQ86V59 439 aaPredicted RBP12.13□□□□□ -0.47
CPT1A-206ENST00000540367 SYT2Q8N9I0 419 aaPredicted RBP12.13□□□□□ -0.47
CPT1A-206ENST00000540367 ABCF3Q9NUQ8 709 aa12.13□□□□□ -0.47
CPT1A-206ENST00000540367 IGKV6D-41A0A0C4DH26 115 aa12.12□□□□□ -0.47
CPT1A-206ENST00000540367 RTN2O75298 545 aa12.12□□□□□ -0.47
CPT1A-206ENST00000540367 OAS1P00973 400 aaKnown RBP12.12□□□□□ -0.47
CPT1A-206ENST00000540367 KRT13P13646 458 aa12.12□□□□□ -0.47
CPT1A-206ENST00000540367 ALADP13716 330 aa12.12□□□□□ -0.47
CPT1A-206ENST00000540367 HSPA6P17066 643 aa12.12□□□□□ -0.47
CPT1A-206ENST00000540367 TAL1P17542 331 aaPredicted RBP12.12□□□□□ -0.47
CPT1A-206ENST00000540367 SLC16A2P36021 539 aa12.12□□□□□ -0.47
CPT1A-206ENST00000540367 SHROOM1Q2M3G4 852 aaPredicted RBP12.12□□□□□ -0.47
CPT1A-206ENST00000540367 CATSPER3Q86XQ3 398 aa12.12□□□□□ -0.47
CPT1A-206ENST00000540367 SLFN12Q8IYM2 578 aa12.12□□□□□ -0.47
CPT1A-206ENST00000540367 ALG3Q92685 438 aa12.12□□□□□ -0.47
CPT1A-206ENST00000540367 ARHGEF26Q96DR7 871 aa12.12□□□□□ -0.47
CPT1A-206ENST00000540367 MBOAT7Q96N66 472 aa12.12□□□□□ -0.47
CPT1A-206ENST00000540367 STK33Q9BYT3 514 aa12.12□□□□□ -0.47
CPT1A-206ENST00000540367 SEMA4AQ9H3S1 761 aa12.12□□□□□ -0.47
CPT1A-206ENST00000540367 MTRF1LQ9UGC7 380 aaKnown RBP12.12□□□□□ -0.47
CPT1A-206ENST00000540367 PARP2Q9UGN5 583 aa12.12□□□□□ -0.47
CPT1A-206ENST00000540367 AGAP1Q9UPQ3 857 aa12.12□□□□□ -0.47
CPT1A-206ENST00000540367 SYNGAP1Q96PV0 1343 aa12.12□□□□□ -0.47
CPT1A-206ENST00000540367 CYP3A7-CYP3A51PA0A087WV96 503 aa12.12□□□□□ -0.47
CPT1A-206ENST00000540367 ZBTB5O15062 677 aa12.12□□□□□ -0.47
CPT1A-206ENST00000540367 SNX3O60493 162 aa12.12□□□□□ -0.47
CPT1A-206ENST00000540367 CYP3A7P24462 503 aa12.12□□□□□ -0.47
CPT1A-206ENST00000540367 CHRNA3P32297 505 aa12.12□□□□□ -0.47
CPT1A-206ENST00000540367 PDE6CP51160 858 aa12.12□□□□□ -0.47
CPT1A-206ENST00000540367 PSMC6P62333 389 aa12.12□□□□□ -0.47
CPT1A-206ENST00000540367 SPIRE1Q08AE8 756 aa12.12□□□□□ -0.47
CPT1A-206ENST00000540367 SF3A3Q12874 501 aaKnown RBP eCLIP12.12□□□□□ -0.479e-8■■■■■ 48.2
CPT1A-206ENST00000540367 MYO1EQ12965 1108 aa12.12□□□□□ -0.47
CPT1A-206ENST00000540367 PABPC4Q13310 644 aaKnown RBP eCLIP12.12□□□□□ -0.476e-11■■■□□ 18.3
CPT1A-206ENST00000540367 CNGA2Q16280 664 aa12.12□□□□□ -0.47
CPT1A-206ENST00000540367 EPS8L3Q8TE67 593 aaKnown RBP12.12□□□□□ -0.47
CPT1A-206ENST00000540367 NSMCE1Q8WV22 266 aa12.12□□□□□ -0.47
CPT1A-206ENST00000540367 C18orf8Q96DM3 657 aa12.12□□□□□ -0.47
CPT1A-206ENST00000540367 BORCS6Q96GS4 357 aa12.12□□□□□ -0.47
CPT1A-206ENST00000540367 DNM3Q9UQ16 869 aa12.12□□□□□ -0.47
CPT1A-206ENST00000540367 C15orf41Q9Y2V0 281 aa12.12□□□□□ -0.47
CPT1A-206ENST00000540367 MYO3BQ8WXR4 1341 aa12.12□□□□□ -0.47
CPT1A-206ENST00000540367 C10orf71Q711Q0 1435 aa12.11□□□□□ -0.47
CPT1A-206ENST00000540367 CCDC189A1A4V9 331 aa12.11□□□□□ -0.47
CPT1A-206ENST00000540367 PODXLO00592 558 aa12.11□□□□□ -0.47
CPT1A-206ENST00000540367 MYCNP04198 464 aaPredicted RBP12.11□□□□□ -0.47
CPT1A-206ENST00000540367 NQO1P15559 274 aaKnown RBP12.11□□□□□ -0.47
CPT1A-206ENST00000540367 PAX7P23759 505 aa12.11□□□□□ -0.47
CPT1A-206ENST00000540367 RPL21P46778 160 aaKnown RBP12.11□□□□□ -0.47
CPT1A-206ENST00000540367 IFNAR2P48551 515 aa12.11□□□□□ -0.47
CPT1A-206ENST00000540367 NCALDP61601 193 aa12.11□□□□□ -0.47
CPT1A-206ENST00000540367 GPSM2P81274 684 aa12.11□□□□□ -0.47
CPT1A-206ENST00000540367 DRAP1Q14919 205 aaPredicted RBP12.11□□□□□ -0.47
CPT1A-206ENST00000540367 NAA25Q14CX7 972 aa12.11□□□□□ -0.47
CPT1A-206ENST00000540367 TRAPPC3LQ5T215 181 aa12.11□□□□□ -0.47
CPT1A-206ENST00000540367 UBAP2Q5T6F2 1119 aaKnown RBP12.11□□□□□ -0.47
CPT1A-206ENST00000540367 TTBK2Q6IQ55 1244 aa12.11□□□□□ -0.47
CPT1A-206ENST00000540367 TPTE2Q6XPS3 522 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms