RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 NEUROG2Q9H2A3 272 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 ARMCX1Q9P291 453 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 KIAA0232Q92628 1395 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 LRRC10BA6NIK2 292 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 PRKAB2O43741 272 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 ATP5HO75947 161 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 OCM2P0CE71 109 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 OCMP0CE72 109 aaPredicted RBP11.85□□□□□ -0.51
PBX1-212ENST00000540236 MCF2P10911 925 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 SOX11P35716 441 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 SH3D19Q5HYK7 790 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 CLEC4GQ6UXB4 293 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 GFM2Q969S9 779 aaKnown RBP11.85□□□□□ -0.51
PBX1-212ENST00000540236 THAP11Q96EK4 314 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 CRNKL1Q9BZJ0 848 aaKnown RBP11.85□□□□□ -0.51
PBX1-212ENST00000540236 ZNF229Q9UJW7 825 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 RABL2BQ9UNT1 228 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 PDE6AP16499 860 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 TCN1P20061 433 aaPredicted RBP11.85□□□□□ -0.51
PBX1-212ENST00000540236 SSTR3P32745 418 aaPredicted RBP11.85□□□□□ -0.51
PBX1-212ENST00000540236 TNNI2P48788 182 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 SGO2Q562F6 1265 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 MTHFD1LQ6UB35 978 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 PALM2Q8IXS6 379 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 ZNF654Q8IZM8 581 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 SDR42E1Q8WUS8 393 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 STX8Q9UNK0 236 aa11.85□□□□□ -0.51
PBX1-212ENST00000540236 AFF2P51816 1311 aa11.84□□□□□ -0.51
PBX1-212ENST00000540236 CLIC2O15247 247 aa11.84□□□□□ -0.51
PBX1-212ENST00000540236 ITGA7Q13683 1181 aa11.84□□□□□ -0.51
PBX1-212ENST00000540236 ANKRD35Q8N283 1001 aa11.84□□□□□ -0.51
PBX1-212ENST00000540236 ZCRB1Q8TBF4 217 aaKnown RBP11.84□□□□□ -0.51
PBX1-212ENST00000540236 PYDC1Q8WXC3 89 aa11.84□□□□□ -0.51
PBX1-212ENST00000540236 PAIP1Q9H074 479 aaKnown RBP11.84□□□□□ -0.51
PBX1-212ENST00000540236 OCEL1Q9H607 264 aa11.84□□□□□ -0.51
PBX1-212ENST00000540236 TFPTP0C1Z6 253 aa11.84□□□□□ -0.51
PBX1-212ENST00000540236 SPARCL1Q14515 664 aa11.84□□□□□ -0.51
PBX1-212ENST00000540236 KLHDC7AQ5VTJ3 777 aa11.84□□□□□ -0.51
PBX1-212ENST00000540236 TRNAU1APQ9NX07 287 aaKnown RBP11.84□□□□□ -0.51
PBX1-212ENST00000540236 AGTP01019 485 aa11.84□□□□□ -0.51
PBX1-212ENST00000540236 PLCG1P19174 1290 aa11.84□□□□□ -0.51
PBX1-212ENST00000540236 CNGA3Q16281 694 aa11.84□□□□□ -0.51
PBX1-212ENST00000540236 GET4Q7L5D6 327 aaPredicted RBP11.84□□□□□ -0.51
PBX1-212ENST00000540236 CCDC84Q86UT8 332 aaPredicted RBP11.84□□□□□ -0.51
PBX1-212ENST00000540236 ZBTB8BQ8NAP8 495 aaPredicted RBP11.84□□□□□ -0.51
PBX1-212ENST00000540236 PDZD8Q8NEN9 1154 aa11.84□□□□□ -0.51
PBX1-212ENST00000540236 PPWD1Q96BP3 646 aaKnown RBP11.84□□□□□ -0.51
PBX1-212ENST00000540236 ANKRD27Q96NW4 1050 aa11.84□□□□□ -0.51
PBX1-212ENST00000540236 H2AFZP0C0S5 128 aa11.84□□□□□ -0.51
PBX1-212ENST00000540236 GOLGA8HP0CJ92 632 aa11.84□□□□□ -0.51
PBX1-212ENST00000540236 EXOSC10Q01780 885 aaKnown RBP11.84□□□□□ -0.51
PBX1-212ENST00000540236 ASPHQ12797 758 aa11.84□□□□□ -0.51
PBX1-212ENST00000540236 TCIRG1Q13488 830 aa11.84□□□□□ -0.51
PBX1-212ENST00000540236 CLUL1Q15846 466 aa11.84□□□□□ -0.51
PBX1-212ENST00000540236 H2AFVQ71UI9 128 aa11.84□□□□□ -0.51
PBX1-212ENST00000540236 TMEM87BQ96K49 555 aa11.84□□□□□ -0.51
PBX1-212ENST00000540236 MAF1Q9H063 256 aa11.84□□□□□ -0.51
PBX1-212ENST00000540236 SEMA4AQ9H3S1 761 aa11.84□□□□□ -0.51
PBX1-212ENST00000540236 ADCY6O43306 1168 aa11.84□□□□□ -0.51
PBX1-212ENST00000540236 SLC34A1Q06495 639 aa11.84□□□□□ -0.51
PBX1-212ENST00000540236 EPHA10Q5JZY3 1008 aa11.84□□□□□ -0.51
PBX1-212ENST00000540236 NCCRP1Q6ZVX7 275 aaPredicted RBP11.84□□□□□ -0.51
PBX1-212ENST00000540236 ZNF280CQ8ND82 737 aa11.84□□□□□ -0.51
PBX1-212ENST00000540236 LINS1Q8NG48 757 aa11.84□□□□□ -0.51
PBX1-212ENST00000540236 MRPL1Q9BYD6 325 aaKnown RBP11.84□□□□□ -0.51
PBX1-212ENST00000540236 TBC1D23Q9NUY8 699 aa11.84□□□□□ -0.51
PBX1-212ENST00000540236 FIS1Q9Y3D6 152 aa11.84□□□□□ -0.51
PBX1-212ENST00000540236 SALL3Q9BXA9 1300 aa11.83□□□□□ -0.52
PBX1-212ENST00000540236 SPDYE16A6NNV3 312 aaPredicted RBP11.83□□□□□ -0.52
PBX1-212ENST00000540236 ATF7P17544 494 aaPredicted RBP11.83□□□□□ -0.52
PBX1-212ENST00000540236 PPIDQ08752 370 aaKnown RBP11.83□□□□□ -0.52
PBX1-212ENST00000540236 CNNM2Q9H8M5 875 aa11.83□□□□□ -0.52
PBX1-212ENST00000540236 DDX28Q9NUL7 540 aaKnown RBP11.83□□□□□ -0.52
PBX1-212ENST00000540236 HERC4Q5GLZ8 1057 aaPredicted RBP11.83□□□□□ -0.52
PBX1-212ENST00000540236 GIPC3Q8TF64 312 aa11.83□□□□□ -0.52
PBX1-212ENST00000540236 ESR2Q92731 530 aa11.83□□□□□ -0.52
PBX1-212ENST00000540236 CFAP36Q96G28 342 aa11.83□□□□□ -0.52
PBX1-212ENST00000540236 CCDC61Q9Y6R9 512 aa11.83□□□□□ -0.52
PBX1-212ENST00000540236 ADGRL3Q9HAR2 1447 aa11.83□□□□□ -0.52
PBX1-212ENST00000540236 ATP2A1O14983 1001 aa11.83□□□□□ -0.52
PBX1-212ENST00000540236 CALM1P0DP23 149 aa11.83□□□□□ -0.52
PBX1-212ENST00000540236 CALM2P0DP24 149 aa11.83□□□□□ -0.52
PBX1-212ENST00000540236 CALM3P0DP25 149 aa11.83□□□□□ -0.52
PBX1-212ENST00000540236 ARPP19P56211 112 aa11.83□□□□□ -0.52
PBX1-212ENST00000540236 MYBPC3Q14896 1274 aa11.83□□□□□ -0.52
PBX1-212ENST00000540236 CCDC137Q6PK04 289 aaKnown RBP11.83□□□□□ -0.52
PBX1-212ENST00000540236 TRMT10CQ7L0Y3 403 aaKnown RBP11.83□□□□□ -0.52
PBX1-212ENST00000540236 METTL13Q8N6R0 699 aa11.83□□□□□ -0.52
PBX1-212ENST00000540236 C9orf72Q96LT7 481 aa11.83□□□□□ -0.52
PBX1-212ENST00000540236 CCT7Q99832 543 aa11.83□□□□□ -0.52
PBX1-212ENST00000540236 LRCH1Q9Y2L9 728 aa11.83□□□□□ -0.52
PBX1-212ENST00000540236 E2F8A0AVK6 867 aa11.83□□□□□ -0.52
PBX1-212ENST00000540236 RSPH10B2B2RC85 870 aa11.83□□□□□ -0.52
PBX1-212ENST00000540236 MAP3K13O43283 966 aa11.83□□□□□ -0.52
PBX1-212ENST00000540236 RSPH10BP0C881 870 aa11.83□□□□□ -0.52
PBX1-212ENST00000540236 MTA1Q13330 715 aa11.83□□□□□ -0.52
PBX1-212ENST00000540236 LACTB2Q53H82 288 aaPredicted RBP11.83□□□□□ -0.52
PBX1-212ENST00000540236 RBM12BQ8IXT5 1001 aaKnown RBP11.83□□□□□ -0.52
PBX1-212ENST00000540236 FANCBQ8NB91 859 aa11.83□□□□□ -0.52
PBX1-212ENST00000540236 SNX29Q8TEQ0 813 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms