RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 SLC39A11Q8N1S5 342 aa16.86■□□□□ 0.29
USB1-203ENST00000539737 PHKBQ93100 1093 aa16.86■□□□□ 0.29
USB1-203ENST00000539737 CDCA3Q99618 268 aaPredicted RBP16.86■□□□□ 0.29
USB1-203ENST00000539737 ZNF577Q9BSK1 485 aa16.86■□□□□ 0.29
USB1-203ENST00000539737 LIMD1Q9UGP4 676 aa16.86■□□□□ 0.29
USB1-203ENST00000539737 COL1A2P08123 1366 aa16.86■□□□□ 0.29
USB1-203ENST00000539737 GVINP1Q7Z2Y8 2422 aa16.86■□□□□ 0.29
USB1-203ENST00000539737 EDIL3O43854 480 aa16.85■□□□□ 0.29
USB1-203ENST00000539737 SSRP1Q08945 709 aaKnown RBP16.85■□□□□ 0.29
USB1-203ENST00000539737 AP3B2Q13367 1082 aa16.85■□□□□ 0.29
USB1-203ENST00000539737 EFCAB12Q6NXP0 572 aa16.85■□□□□ 0.29
USB1-203ENST00000539737 LRRC43Q8N309 656 aa16.85■□□□□ 0.29
USB1-203ENST00000539737 LINC01465Q8N7H1 131 aa16.85■□□□□ 0.29
USB1-203ENST00000539737 CRYGNQ8WXF5 182 aa16.85■□□□□ 0.29
USB1-203ENST00000539737 TBC1D32Q96NH3 1257 aa16.85■□□□□ 0.29
USB1-203ENST00000539737 ESYT2A0FGR8 921 aa16.84■□□□□ 0.29
USB1-203ENST00000539737 GALR2O43603 387 aaPredicted RBP16.84■□□□□ 0.29
USB1-203ENST00000539737 CHMP2AO43633 222 aa16.84■□□□□ 0.29
USB1-203ENST00000539737 SLC26A2P50443 739 aa16.84■□□□□ 0.29
USB1-203ENST00000539737 SCRN1Q12765 414 aa16.84■□□□□ 0.29
USB1-203ENST00000539737 PRR16Q569H4 304 aa16.84■□□□□ 0.29
USB1-203ENST00000539737 FRMD5Q7Z6J6 570 aa16.84■□□□□ 0.29
USB1-203ENST00000539737 ABI1Q8IZP0 508 aa16.84■□□□□ 0.29
USB1-203ENST00000539737 MRPL43Q8N983 215 aaKnown RBP16.84■□□□□ 0.29
USB1-203ENST00000539737 CCDC148Q8NFR7 591 aa16.84■□□□□ 0.29
USB1-203ENST00000539737 BBXQ8WY36 941 aaPredicted RBP16.84■□□□□ 0.29
USB1-203ENST00000539737 KIF2CQ99661 725 aa16.84■□□□□ 0.29
USB1-203ENST00000539737 BACH2Q9BYV9 841 aa16.84■□□□□ 0.29
USB1-203ENST00000539737 SPG21Q9NZD8 308 aa16.84■□□□□ 0.29
USB1-203ENST00000539737 TCEAL9Q9UHQ7 104 aa16.84■□□□□ 0.29
USB1-203ENST00000539737 PUF60Q9UHX1 559 aaKnown RBP16.84■□□□□ 0.29
USB1-203ENST00000539737 LZTS1Q9Y250 596 aa16.84■□□□□ 0.29
USB1-203ENST00000539737 MAFBQ9Y5Q3 323 aaPredicted RBP16.84■□□□□ 0.29
USB1-203ENST00000539737 DEXIO95424 95 aa16.83■□□□□ 0.28
USB1-203ENST00000539737 CXCL14O95715 111 aa16.83■□□□□ 0.28
USB1-203ENST00000539737 GPC3P51654 580 aa16.83■□□□□ 0.28
USB1-203ENST00000539737 BCAR1P56945 870 aa16.83■□□□□ 0.28
USB1-203ENST00000539737 PKN1Q16512 942 aa16.83■□□□□ 0.28
USB1-203ENST00000539737 TMC5Q6UXY8 1006 aa16.83■□□□□ 0.28
USB1-203ENST00000539737 ZNF598Q86UK7 904 aaKnown RBP16.83■□□□□ 0.28
USB1-203ENST00000539737 FAM177A1Q8N128 213 aaPredicted RBP16.83■□□□□ 0.28
USB1-203ENST00000539737 ST13P5Q8NFI4 369 aaPredicted RBP16.83■□□□□ 0.28
USB1-203ENST00000539737 CASP10Q92851 521 aa16.83■□□□□ 0.28
USB1-203ENST00000539737 GTF3C6Q969F1 213 aa16.83■□□□□ 0.28
USB1-203ENST00000539737 VN1R3Q9BXE9 311 aa16.83■□□□□ 0.28
USB1-203ENST00000539737 ADAM7Q9H2U9 754 aa16.83■□□□□ 0.28
USB1-203ENST00000539737 ELAC1Q9H777 363 aaKnown RBP16.83■□□□□ 0.28
USB1-203ENST00000539737 C6orf50Q9HD87 102 aa16.83■□□□□ 0.28
USB1-203ENST00000539737 STK36Q9NRP7 1315 aa16.83■□□□□ 0.28
USB1-203ENST00000539737 SORCS3Q9UPU3 1222 aa16.83■□□□□ 0.28
USB1-203ENST00000539737 INPP5FQ9Y2H2 1132 aa16.83■□□□□ 0.28
USB1-203ENST00000539737 SAMM50Q9Y512 469 aa16.83■□□□□ 0.28
USB1-203ENST00000539737 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.82■□□□□ 0.28
USB1-203ENST00000539737 PRR23AA6NEV1 266 aa16.82■□□□□ 0.28
USB1-203ENST00000539737 PI15O43692 258 aa16.82■□□□□ 0.28
USB1-203ENST00000539737 ZC3H11AO75152 810 aaKnown RBP eCLIP16.82■□□□□ 0.28
USB1-203ENST00000539737 SSBP05455 408 aaKnown RBP eCLIP16.82■□□□□ 0.28
USB1-203ENST00000539737 SRGAP2BP0DMP2 458 aa16.82■□□□□ 0.28
USB1-203ENST00000539737 GNA11P29992 359 aa16.82■□□□□ 0.28
USB1-203ENST00000539737 PRKCEQ02156 737 aa16.82■□□□□ 0.28
USB1-203ENST00000539737 MTMR3Q13615 1198 aa16.82■□□□□ 0.28
USB1-203ENST00000539737 SMC1AQ14683 1233 aaKnown RBP16.82■□□□□ 0.28
USB1-203ENST00000539737 ME3Q16798 604 aa16.82■□□□□ 0.28
USB1-203ENST00000539737 CWF19L1Q69YN2 538 aaKnown RBP16.82■□□□□ 0.28
USB1-203ENST00000539737 PDE12Q6L8Q7 609 aaKnown RBP16.82■□□□□ 0.28
USB1-203ENST00000539737 VPS52Q8N1B4 723 aa16.82■□□□□ 0.28
USB1-203ENST00000539737 FLCNQ8NFG4 579 aa16.82■□□□□ 0.28
USB1-203ENST00000539737 BICD2Q8TD16 824 aa16.82■□□□□ 0.28
USB1-203ENST00000539737 LENG9Q96B70 501 aa16.82■□□□□ 0.28
USB1-203ENST00000539737 SCLT1Q96NL6 688 aa16.82■□□□□ 0.28
USB1-203ENST00000539737 PRRX2Q99811 253 aa16.82■□□□□ 0.28
USB1-203ENST00000539737 GBP3Q9H0R5 595 aa16.82■□□□□ 0.28
USB1-203ENST00000539737 NGRNQ9NPE2 291 aaKnown RBP16.82■□□□□ 0.28
USB1-203ENST00000539737 SH3GLB2Q9NR46 395 aa16.82■□□□□ 0.28
USB1-203ENST00000539737 LIMCH1Q9UPQ0 1083 aa16.82■□□□□ 0.28
USB1-203ENST00000539737 C2orf16Q68DN1 1984 aa16.82■□□□□ 0.28
USB1-203ENST00000539737 LARGE1O95461 756 aa16.81■□□□□ 0.28
USB1-203ENST00000539737 ZSCAN20P17040 1043 aaPredicted RBP16.81■□□□□ 0.28
USB1-203ENST00000539737 EIF4BP23588 611 aaKnown RBP16.81■□□□□ 0.28
USB1-203ENST00000539737 KRT17Q04695 432 aa16.81■□□□□ 0.28
USB1-203ENST00000539737 NIPA1Q7RTP0 329 aa16.81■□□□□ 0.28
USB1-203ENST00000539737 KSR1Q8IVT5 923 aa16.81■□□□□ 0.28
USB1-203ENST00000539737 ZSCAN31Q96LW9 406 aaPredicted RBP16.81■□□□□ 0.28
USB1-203ENST00000539737 ZBP1Q9H171 429 aa16.81■□□□□ 0.28
USB1-203ENST00000539737 DNAJB4Q9UDY4 337 aa16.81■□□□□ 0.28
USB1-203ENST00000539737 DENND4AQ7Z401 1863 aa16.81■□□□□ 0.28
USB1-203ENST00000539737 OATP04181 439 aa16.8■□□□□ 0.28
USB1-203ENST00000539737 PSAPP07602 524 aa16.8■□□□□ 0.28
USB1-203ENST00000539737 DARSP14868 501 aaKnown RBP16.8■□□□□ 0.28
USB1-203ENST00000539737 AFF1P51825 1210 aaKnown RBP16.8■□□□□ 0.28
USB1-203ENST00000539737 CES5AQ6NT32 575 aa16.8■□□□□ 0.28
USB1-203ENST00000539737 ZNF746Q6NUN9 644 aaPredicted RBP16.8■□□□□ 0.28
USB1-203ENST00000539737 NLRP7Q8WX94 980 aa16.8■□□□□ 0.28
USB1-203ENST00000539737 WASF1Q92558 559 aa16.8■□□□□ 0.28
USB1-203ENST00000539737 MAP7D2Q96T17 732 aa16.8■□□□□ 0.28
USB1-203ENST00000539737 ZMYND12Q9H0C1 365 aa16.8■□□□□ 0.28
USB1-203ENST00000539737 UNC45AQ9H3U1 944 aa16.8■□□□□ 0.28
USB1-203ENST00000539737 SH2B1Q9NRF2 756 aaPredicted RBP16.8■□□□□ 0.28
USB1-203ENST00000539737 DBR1Q9UK59 544 aaKnown RBP16.8■□□□□ 0.28
USB1-203ENST00000539737 NR2E1Q9Y466 385 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms