RNA–Protein interactions for RNA: ENST00000539492.1

CD4-209, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-209ENST00000539492 RNF169Q8NCN4 708 aa9.16□□□□□ -0.94
CD4-209ENST00000539492 KREMEN2Q8NCW0 462 aa9.16□□□□□ -0.94
CD4-209ENST00000539492 RDM1Q8NG50 284 aa9.16□□□□□ -0.94
CD4-209ENST00000539492 HELQQ8TDG4 1101 aa9.16□□□□□ -0.94
CD4-209ENST00000539492 NLRP7Q8WX94 980 aa9.16□□□□□ -0.94
CD4-209ENST00000539492 TMEM169Q96HH4 297 aa9.16□□□□□ -0.94
CD4-209ENST00000539492 ZNF668Q96K58 619 aaPredicted RBP9.16□□□□□ -0.94
CD4-209ENST00000539492 RIPOR3Q96MK2 946 aa9.16□□□□□ -0.94
CD4-209ENST00000539492 RIT2Q99578 217 aa9.16□□□□□ -0.94
CD4-209ENST00000539492 TEKT3Q9BXF9 490 aa9.16□□□□□ -0.94
CD4-209ENST00000539492 POMKQ9H5K3 350 aa9.16□□□□□ -0.94
CD4-209ENST00000539492 TSHZ2Q9NRE2 1034 aa9.16□□□□□ -0.94
CD4-209ENST00000539492 DZANK1Q9NVP4 752 aa9.16□□□□□ -0.94
CD4-209ENST00000539492 HCFC2Q9Y5Z7 792 aa9.16□□□□□ -0.94
CD4-209ENST00000539492 C2CD4DB7Z1M9 353 aa9.15□□□□□ -0.94
CD4-209ENST00000539492 CHMP2AO43633 222 aa9.15□□□□□ -0.94
CD4-209ENST00000539492 GFRA3O60609 400 aa9.15□□□□□ -0.94
CD4-209ENST00000539492 CLASP2O75122 1294 aaKnown RBP9.15□□□□□ -0.94
CD4-209ENST00000539492 CDC45O75419 566 aa9.15□□□□□ -0.94
CD4-209ENST00000539492 FGFR4P22455 802 aa9.15□□□□□ -0.94
CD4-209ENST00000539492 SFPQP23246 707 aaKnown RBP eCLIP9.15□□□□□ -0.94
CD4-209ENST00000539492 CA8P35219 290 aa9.15□□□□□ -0.94
CD4-209ENST00000539492 ALDH7A1P49419 539 aaKnown RBP9.15□□□□□ -0.94
CD4-209ENST00000539492 USP11P51784 963 aa9.15□□□□□ -0.94
CD4-209ENST00000539492 BCAR1P56945 870 aa9.15□□□□□ -0.94
CD4-209ENST00000539492 GIT2Q14161 759 aa9.15□□□□□ -0.94
CD4-209ENST00000539492 TARBP2Q15633 366 aaKnown RBP9.15□□□□□ -0.94
CD4-209ENST00000539492 UGCGQ16739 394 aa9.15□□□□□ -0.94
CD4-209ENST00000539492 LRCH2Q5VUJ6 765 aa9.15□□□□□ -0.94
CD4-209ENST00000539492 BLOC1S2Q6QNY1 142 aa9.15□□□□□ -0.94
CD4-209ENST00000539492 FBXL16Q8N461 479 aa9.15□□□□□ -0.94
CD4-209ENST00000539492 TDRD5Q8NAT2 981 aaKnown RBP9.15□□□□□ -0.94
CD4-209ENST00000539492 ATOH1Q92858 354 aaPredicted RBP9.15□□□□□ -0.94
CD4-209ENST00000539492 SLC5A5Q92911 643 aa9.15□□□□□ -0.94
CD4-209ENST00000539492 KCNB2Q92953 911 aa9.15□□□□□ -0.94
CD4-209ENST00000539492 BRF1Q92994 677 aa9.15□□□□□ -0.94
CD4-209ENST00000539492 PHKBQ93100 1093 aa9.15□□□□□ -0.94
CD4-209ENST00000539492 CCDC136Q96JN2 1154 aa9.15□□□□□ -0.94
CD4-209ENST00000539492 JAKMIP1Q96N16 626 aaKnown RBP9.15□□□□□ -0.94
CD4-209ENST00000539492 TRAIPQ9BWF2 469 aa9.15□□□□□ -0.94
CD4-209ENST00000539492 RNF26Q9BY78 433 aaPredicted RBP9.15□□□□□ -0.94
CD4-209ENST00000539492 GCOM2Q9BZD3 368 aaPredicted RBP9.15□□□□□ -0.94
CD4-209ENST00000539492 ZBP1Q9H171 429 aa9.15□□□□□ -0.94
CD4-209ENST00000539492 UNC45AQ9H3U1 944 aa9.15□□□□□ -0.94
CD4-209ENST00000539492 CHST12Q9NRB3 414 aa9.15□□□□□ -0.94
CD4-209ENST00000539492 SEPT9Q9UHD8 586 aaPredicted RBP9.15□□□□□ -0.94
CD4-209ENST00000539492 CDH22Q9UJ99 828 aa9.15□□□□□ -0.94
CD4-209ENST00000539492 SORCS3Q9UPU3 1222 aa9.15□□□□□ -0.94
CD4-209ENST00000539492 FANCMQ8IYD8 2048 aa9.15□□□□□ -0.94
CD4-209ENST00000539492 CEP250Q9BV73 2442 aa9.14□□□□□ -0.95
CD4-209ENST00000539492 OTOGLQ3ZCN5 2332 aa9.14□□□□□ -0.95
CD4-209ENST00000539492 IGKV6-21A0A0C4DH24 114 aa9.14□□□□□ -0.95
CD4-209ENST00000539492 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.14□□□□□ -0.95
CD4-209ENST00000539492 NT5C1B-RDH14C9J2C7 533 aa9.14□□□□□ -0.95
CD4-209ENST00000539492 EDIL3O43854 480 aa9.14□□□□□ -0.95
CD4-209ENST00000539492 ZC3H11AO75152 810 aaKnown RBP eCLIP9.14□□□□□ -0.95
CD4-209ENST00000539492 CXCL14O95715 111 aa9.14□□□□□ -0.95
CD4-209ENST00000539492 PDGFBP01127 241 aaPredicted RBP9.14□□□□□ -0.95
CD4-209ENST00000539492 CTSAP10619 480 aa9.14□□□□□ -0.95
CD4-209ENST00000539492 SKIP12755 728 aa9.14□□□□□ -0.95
CD4-209ENST00000539492 CPA1P15085 419 aa9.14□□□□□ -0.95
CD4-209ENST00000539492 IFNAR1P17181 557 aa9.14□□□□□ -0.95
CD4-209ENST00000539492 PHKA2P46019 1235 aa9.14□□□□□ -0.95
CD4-209ENST00000539492 RAB27AP51159 221 aa9.14□□□□□ -0.95
CD4-209ENST00000539492 POLGP54098 1239 aaPredicted RBP9.14□□□□□ -0.95
CD4-209ENST00000539492 NTRK3Q16288 839 aa9.14□□□□□ -0.95
CD4-209ENST00000539492 MTERF2Q49AM1 385 aa9.14□□□□□ -0.95
CD4-209ENST00000539492 Q4G0T1 1027 aa9.14□□□□□ -0.95
CD4-209ENST00000539492 XKR3Q5GH77 459 aa9.14□□□□□ -0.95
CD4-209ENST00000539492 RARS2Q5T160 578 aaKnown RBP9.14□□□□□ -0.95
CD4-209ENST00000539492 TWF2Q6IBS0 349 aaKnown RBP9.14□□□□□ -0.95
CD4-209ENST00000539492 KIAA1841Q6NSI8 718 aa9.14□□□□□ -0.95
CD4-209ENST00000539492 GLB1LQ6UWU2 654 aa9.14□□□□□ -0.95
CD4-209ENST00000539492 MIER3Q7Z3K6 550 aa9.14□□□□□ -0.95
CD4-209ENST00000539492 ZNF410Q86VK4 478 aa9.14□□□□□ -0.95
CD4-209ENST00000539492 VPS52Q8N1B4 723 aa9.14□□□□□ -0.95
CD4-209ENST00000539492 TMEM87AQ8NBN3 555 aa9.14□□□□□ -0.95
CD4-209ENST00000539492 SLC26A6Q9BXS9 759 aa9.14□□□□□ -0.95
CD4-209ENST00000539492 NIFKQ9BYG3 293 aaKnown RBP9.14□□□□□ -0.95
CD4-209ENST00000539492 AGXT2Q9BYV1 514 aa9.14□□□□□ -0.95
CD4-209ENST00000539492 C22orf23Q9BZE7 217 aa9.14□□□□□ -0.95
CD4-209ENST00000539492 INO80BQ9C086 356 aaPredicted RBP9.14□□□□□ -0.95
CD4-209ENST00000539492 SH3GLB2Q9NR46 395 aa9.14□□□□□ -0.95
CD4-209ENST00000539492 FAM86C1Q9NVL1 165 aa9.14□□□□□ -0.95
CD4-209ENST00000539492 VPS54Q9P1Q0 977 aa9.14□□□□□ -0.95
CD4-209ENST00000539492 IRAK3Q9Y616 596 aa9.14□□□□□ -0.95
CD4-209ENST00000539492 TRIP11Q15643 1979 aa9.13□□□□□ -0.95
CD4-209ENST00000539492 TPRP12270 2363 aaKnown RBP9.13□□□□□ -0.95
CD4-209ENST00000539492 A0A087WZ62 844 aa9.13□□□□□ -0.95
CD4-209ENST00000539492 GALR2O43603 387 aaPredicted RBP9.13□□□□□ -0.95
CD4-209ENST00000539492 CSDE1O75534 798 aaKnown RBP9.13□□□□□ -0.95
CD4-209ENST00000539492 PSMD10O75832 226 aa9.13□□□□□ -0.95
CD4-209ENST00000539492 BRD1O95696 1058 aa9.13□□□□□ -0.95
CD4-209ENST00000539492 DNM2P50570 870 aa9.13□□□□□ -0.95
CD4-209ENST00000539492 DRP2Q13474 957 aa9.13□□□□□ -0.95
CD4-209ENST00000539492 NOMO2Q5JPE7 1267 aa9.13□□□□□ -0.95
CD4-209ENST00000539492 ATAT1Q5SQI0 421 aa9.13□□□□□ -0.95
CD4-209ENST00000539492 DDX53Q86TM3 631 aaKnown RBP9.13□□□□□ -0.95
CD4-209ENST00000539492 PPFIBP1Q86W92 1011 aa9.13□□□□□ -0.95
CD4-209ENST00000539492 TMEM173Q86WV6 379 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms