RNA–Protein interactions for RNA: ENST00000539416.5

NEK6-212, Transcript of NIMA related kinase 6, humanhuman

TSL 2 BASIC

Gene NEK6, Length 2,582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-212ENST00000539416 TGFBRAP1Q8WUH2 860 aa12.89□□□□□ -0.35
NEK6-212ENST00000539416 MOV10L1Q9BXT6 1211 aaKnown RBP12.89□□□□□ -0.35
NEK6-212ENST00000539416 ADAMTS1Q9UHI8 967 aa12.89□□□□□ -0.35
NEK6-212ENST00000539416 MYH4Q9Y623 1939 aa12.89□□□□□ -0.35
NEK6-212ENST00000539416 USP17L12C9JPN9 530 aa12.88□□□□□ -0.35
NEK6-212ENST00000539416 USP17L21D6R901 530 aa12.88□□□□□ -0.35
NEK6-212ENST00000539416 HIP1RO75146 1068 aa12.88□□□□□ -0.35
NEK6-212ENST00000539416 NPM3O75607 178 aaKnown RBP12.88□□□□□ -0.35
NEK6-212ENST00000539416 YBX3P16989 372 aaKnown RBP eCLIP12.88□□□□□ -0.359e-6■■■□□ 18.6
NEK6-212ENST00000539416 RFC5P40937 340 aa12.88□□□□□ -0.35
NEK6-212ENST00000539416 UBA7P41226 1012 aa12.88□□□□□ -0.35
NEK6-212ENST00000539416 USP11P51784 963 aa12.88□□□□□ -0.35
NEK6-212ENST00000539416 EIF3BP55884 814 aaKnown RBP12.88□□□□□ -0.35
NEK6-212ENST00000539416 ASIC1P78348 528 aa12.88□□□□□ -0.35
NEK6-212ENST00000539416 LRRC14Q15048 493 aa12.88□□□□□ -0.35
NEK6-212ENST00000539416 ARL6IP4Q66PJ3 421 aaKnown RBP12.88□□□□□ -0.35
NEK6-212ENST00000539416 CCDC84Q86UT8 332 aaPredicted RBP12.88□□□□□ -0.35
NEK6-212ENST00000539416 HOOK3Q86VS8 718 aa12.88□□□□□ -0.35
NEK6-212ENST00000539416 RASGRP4Q8TDF6 673 aa12.88□□□□□ -0.35
NEK6-212ENST00000539416 RNF41Q9H4P4 317 aaPredicted RBP12.88□□□□□ -0.35
NEK6-212ENST00000539416 CCDC134Q9H6E4 229 aa12.88□□□□□ -0.35
NEK6-212ENST00000539416 BAZ2AQ9UIF9 1905 aaKnown RBP12.88□□□□□ -0.35
NEK6-212ENST00000539416 GOLGA6L10A0A0M3HER8 536 aa12.88□□□□□ -0.35
NEK6-212ENST00000539416 PGRMC1O00264 195 aaKnown RBP12.88□□□□□ -0.35
NEK6-212ENST00000539416 NOL4O94818 638 aa12.88□□□□□ -0.35
NEK6-212ENST00000539416 SP100P23497 879 aaPredicted RBP12.88□□□□□ -0.35
NEK6-212ENST00000539416 CNGA1P29973 690 aa12.88□□□□□ -0.35
NEK6-212ENST00000539416 RCAN1P53805 252 aa12.88□□□□□ -0.35
NEK6-212ENST00000539416 RAD23BP54727 409 aa12.88□□□□□ -0.35
NEK6-212ENST00000539416 POLE2P56282 527 aa12.88□□□□□ -0.35
NEK6-212ENST00000539416 MRPS35P82673 323 aaKnown RBP12.88□□□□□ -0.35
NEK6-212ENST00000539416 CCDC38Q502W7 563 aa12.88□□□□□ -0.35
NEK6-212ENST00000539416 C12orf60Q5U649 245 aa12.88□□□□□ -0.35
NEK6-212ENST00000539416 SFMBT2Q5VUG0 894 aa12.88□□□□□ -0.35
NEK6-212ENST00000539416 TRIM9Q9C026 710 aa12.88□□□□□ -0.35
NEK6-212ENST00000539416 NSRP1Q9H0G5 558 aaKnown RBP12.88□□□□□ -0.35
NEK6-212ENST00000539416 GOPCQ9HD26 462 aa12.88□□□□□ -0.35
NEK6-212ENST00000539416 NR2E1Q9Y466 385 aa12.88□□□□□ -0.35
NEK6-212ENST00000539416 TTC36A6NLP5 189 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 MINDY4BA8MYZ0 360 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 RGS16O15492 202 aaPredicted RBP12.87□□□□□ -0.35
NEK6-212ENST00000539416 SERPING1P05155 500 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 USP17L8P0C7I0 530 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 SLCO1A2P46721 670 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 TRAPPC10P48553 1259 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 NT5C2P49902 561 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 CNGA2Q16280 664 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 SLC18A3Q16572 532 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 DTHD1Q6ZMT9 781 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 LMNTD2Q8IXW0 634 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 ENAHQ8N8S7 591 aaPredicted RBP12.87□□□□□ -0.35
NEK6-212ENST00000539416 SEC14L1Q92503 715 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 PGM2Q96G03 612 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 RBM41Q96IZ5 413 aaKnown RBP12.87□□□□□ -0.35
NEK6-212ENST00000539416 FMO2Q99518 471 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.87□□□□□ -0.351e-7■■□□□ 13.5
NEK6-212ENST00000539416 TRIM4Q9C037 500 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 MCM9Q9NXL9 1143 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 DLGAP2Q9P1A6 1054 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 ROBO3Q96MS0 1386 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 FLT1P17948 1338 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 TCP11X1B4DZS4 312 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 CES2O00748 559 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 PLCG1P19174 1290 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 ATP6V1C1P21283 382 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 PDE6CP51160 858 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 LBRQ14739 615 aaKnown RBP12.87□□□□□ -0.35
NEK6-212ENST00000539416 CENPPQ6IPU0 288 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 LONP2Q86WA8 852 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 MAPKAPK5Q8IW41 473 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 OGFOD1Q8N543 542 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 ANKLE1Q8NAG6 615 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 MGARPQ8TDB4 240 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 IFT74Q96LB3 600 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 RMDN2Q96LZ7 410 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 IDI2Q9BXS1 227 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 TANGO6Q9C0B7 1094 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 CCDC113Q9H0I3 377 aa12.87□□□□□ -0.35
NEK6-212ENST00000539416 PEX11AO75192 247 aa12.86□□□□□ -0.35
NEK6-212ENST00000539416 GM2AP17900 193 aa12.86□□□□□ -0.35
NEK6-212ENST00000539416 ZNF280AP59817 542 aaPredicted RBP12.86□□□□□ -0.35
NEK6-212ENST00000539416 POLR2FP61218 127 aaKnown RBP12.86□□□□□ -0.35
NEK6-212ENST00000539416 CUL3Q13618 768 aa12.86□□□□□ -0.35
NEK6-212ENST00000539416 FAM83BQ5T0W9 1011 aa12.86□□□□□ -0.35
NEK6-212ENST00000539416 FOXB2Q5VYV0 432 aa12.86□□□□□ -0.35
NEK6-212ENST00000539416 SRBD1Q8N5C6 995 aaKnown RBP12.86□□□□□ -0.35
NEK6-212ENST00000539416 FAM81AQ8TBF8 368 aa12.86□□□□□ -0.35
NEK6-212ENST00000539416 ZBED3Q96IU2 234 aaPredicted RBP12.86□□□□□ -0.35
NEK6-212ENST00000539416 ZMYND12Q9H0C1 365 aa12.86□□□□□ -0.35
NEK6-212ENST00000539416 RNPEPL1Q9HAU8 725 aa12.86□□□□□ -0.35
NEK6-212ENST00000539416 FAM114A2Q9NRY5 505 aa12.86□□□□□ -0.35
NEK6-212ENST00000539416 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.86□□□□□ -0.35
NEK6-212ENST00000539416 CNTNAP5Q8WYK1 1306 aa12.86□□□□□ -0.35
NEK6-212ENST00000539416 WFS1O76024 890 aa12.86□□□□□ -0.35
NEK6-212ENST00000539416 MYL1P05976 194 aa12.86□□□□□ -0.35
NEK6-212ENST00000539416 CALB2P22676 271 aa12.86□□□□□ -0.35
NEK6-212ENST00000539416 COPB2P35606 906 aa12.86□□□□□ -0.35
NEK6-212ENST00000539416 PEX5P50542 639 aa12.86□□□□□ -0.35
NEK6-212ENST00000539416 PMS2P54278 862 aa12.86□□□□□ -0.35
NEK6-212ENST00000539416 SLC29A2Q14542 456 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms