RNA–Protein interactions for RNA: ENST00000539276.6

ATP2A2-204, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-204ENST00000539276 POLLQ9UGP5 575 aa16.93■□□□□ 0.3
ATP2A2-204ENST00000539276 NDUFB10O96000 172 aa16.93■□□□□ 0.3
ATP2A2-204ENST00000539276 SLC35G1Q2M3R5 365 aa16.93■□□□□ 0.3
ATP2A2-204ENST00000539276 TMEM119Q4V9L6 283 aa16.93■□□□□ 0.3
ATP2A2-204ENST00000539276 LRIG3Q6UXM1 1119 aa16.93■□□□□ 0.3
ATP2A2-204ENST00000539276 MIGA2Q7L4E1 593 aa16.93■□□□□ 0.3
ATP2A2-204ENST00000539276 MICAL1Q8TDZ2 1067 aa16.93■□□□□ 0.3
ATP2A2-204ENST00000539276 C1orf54Q8WWF1 131 aa16.93■□□□□ 0.3
ATP2A2-204ENST00000539276 ACCSQ96QU6 501 aa16.93■□□□□ 0.3
ATP2A2-204ENST00000539276 STK33Q9BYT3 514 aa16.93■□□□□ 0.3
ATP2A2-204ENST00000539276 GDF3Q9NR23 364 aa16.93■□□□□ 0.3
ATP2A2-204ENST00000539276 DBR1Q9UK59 544 aaKnown RBP16.93■□□□□ 0.3
ATP2A2-204ENST00000539276 PITPNM2Q9BZ72 1349 aa16.93■□□□□ 0.3
ATP2A2-204ENST00000539276 LOC102724159A0A0B4J2E5 919 aa16.92■□□□□ 0.3
ATP2A2-204ENST00000539276 RASSF10A6NK89 507 aa16.92■□□□□ 0.3
ATP2A2-204ENST00000539276 PWP2Q15269 919 aaKnown RBP16.92■□□□□ 0.3
ATP2A2-204ENST00000539276 HHATQ5VTY9 493 aa16.92■□□□□ 0.3
ATP2A2-204ENST00000539276 PADI6Q6TGC4 694 aa16.92■□□□□ 0.3
ATP2A2-204ENST00000539276 C1orf112Q9NSG2 853 aa16.92■□□□□ 0.3
ATP2A2-204ENST00000539276 ZNF148Q9UQR1 794 aa16.92■□□□□ 0.3
ATP2A2-204ENST00000539276 ALG6Q9Y672 507 aa16.92■□□□□ 0.3
ATP2A2-204ENST00000539276 LAMA4Q16363 1823 aa16.92■□□□□ 0.3
ATP2A2-204ENST00000539276 PODXLO00592 558 aa16.92■□□□□ 0.3
ATP2A2-204ENST00000539276 HNRNPDLO14979 420 aaKnown RBP16.92■□□□□ 0.3
ATP2A2-204ENST00000539276 RWDD2BP57060 319 aa16.92■□□□□ 0.3
ATP2A2-204ENST00000539276 SLC29A2Q14542 456 aa16.92■□□□□ 0.3
ATP2A2-204ENST00000539276 JAMLQ86YT9 394 aa16.92■□□□□ 0.3
ATP2A2-204ENST00000539276 SYT2Q8N9I0 419 aaPredicted RBP16.92■□□□□ 0.3
ATP2A2-204ENST00000539276 IQCGQ9H095 443 aaKnown RBP16.92■□□□□ 0.3
ATP2A2-204ENST00000539276 AGTPBP1Q9UPW5 1226 aa16.92■□□□□ 0.3
ATP2A2-204ENST00000539276 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.92■□□□□ 0.3
ATP2A2-204ENST00000539276 SUCLA2Q9P2R7 463 aaPredicted RBP16.92■□□□□ 0.3
ATP2A2-204ENST00000539276 APEX2Q9UBZ4 518 aa16.92■□□□□ 0.3
ATP2A2-204ENST00000539276 ANAPC7Q9UJX3 599 aa16.92■□□□□ 0.3
ATP2A2-204ENST00000539276 MIF4GDA9UHW6 222 aaKnown RBP16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 PPIP5K2O43314 1243 aa16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 NSFP46459 744 aaKnown RBP16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 FAM47EQ6ZV65 393 aa16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 RAPGEF5Q92565 580 aa16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 PURBQ96QR8 312 aaKnown RBP16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 AGPAT1Q99943 283 aa16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 LXNQ9BS40 222 aa16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 ANAPC5Q9UJX4 755 aa16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 GBP1P32455 592 aa16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 PRELPP51888 382 aa16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 ZNF131P52739 623 aa16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 DLGAP5Q15398 846 aa16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 XPO6Q96QU8 1125 aaKnown RBP16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 PRMT1Q99873 361 aaKnown RBP16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 ERP44Q9BS26 406 aa16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 PCDHGC5Q9Y5F6 944 aa16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 VAMP7P51809 220 aa16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 ZRSR2Q15696 482 aaKnown RBP16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 HGSNATQ68CP4 663 aa16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 PARP9Q8IXQ6 854 aa16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 ZNF564Q8TBZ8 553 aaPredicted RBP16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 ARHGEF2Q92974 986 aaKnown RBP16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 IWS1Q96ST2 819 aa16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 NUP85Q9BW27 656 aa16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 CNOT8Q9UFF9 292 aaKnown RBP16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 CYP26A1O43174 497 aa16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 BYSLQ13895 437 aaKnown RBP16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 TMED2Q15363 201 aa16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 FBXO25Q8TCJ0 367 aa16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 SAAL1Q96ER3 474 aa16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 TMEM206Q9H813 350 aa16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 DDX4Q9NQI0 724 aaKnown RBP16.91■□□□□ 0.3
ATP2A2-204ENST00000539276 SLC16A4O15374 487 aa16.9■□□□□ 0.3
ATP2A2-204ENST00000539276 MSH4O15457 936 aa16.9■□□□□ 0.3
ATP2A2-204ENST00000539276 CAND2O75155 1236 aa16.9■□□□□ 0.3
ATP2A2-204ENST00000539276 HSPA9P38646 679 aaKnown RBP16.9■□□□□ 0.3
ATP2A2-204ENST00000539276 SRRM1Q8IYB3 904 aaKnown RBP16.9■□□□□ 0.3
ATP2A2-204ENST00000539276 XXYLT1Q8NBI6 393 aa16.9■□□□□ 0.3
ATP2A2-204ENST00000539276 SLC30A5Q8TAD4 765 aa16.9■□□□□ 0.3
ATP2A2-204ENST00000539276 INPP4AQ96PE3 977 aaPredicted RBP16.9■□□□□ 0.3
ATP2A2-204ENST00000539276 SLC40A1Q9NP59 571 aa16.9■□□□□ 0.3
ATP2A2-204ENST00000539276 CNTNAP4Q9C0A0 1308 aa16.9■□□□□ 0.3
ATP2A2-204ENST00000539276 HIP1RO75146 1068 aa16.9■□□□□ 0.3
ATP2A2-204ENST00000539276 PCK1P35558 622 aa16.9■□□□□ 0.3
ATP2A2-204ENST00000539276 SKOR1P84550 965 aa16.9■□□□□ 0.3
ATP2A2-204ENST00000539276 ZNF844Q08AG5 666 aa16.9■□□□□ 0.3
ATP2A2-204ENST00000539276 HP1BP3Q5SSJ5 553 aaPredicted RBP16.9■□□□□ 0.3
ATP2A2-204ENST00000539276 RC3H1Q5TC82 1133 aaKnown RBP16.9■□□□□ 0.3
ATP2A2-204ENST00000539276 TRIM68Q6AZZ1 485 aa16.9■□□□□ 0.3
ATP2A2-204ENST00000539276 ACTRT1Q8TDG2 376 aa16.9■□□□□ 0.3
ATP2A2-204ENST00000539276 FAM187AA6NFU0 413 aa16.9■□□□□ 0.3
ATP2A2-204ENST00000539276 H0YIN7 160 aa16.9■□□□□ 0.3
ATP2A2-204ENST00000539276 FOXN3O00409 490 aaPredicted RBP16.9■□□□□ 0.3
ATP2A2-204ENST00000539276 DDX3XO00571 662 aaKnown RBP eCLIP16.9■□□□□ 0.31e-9■■■□□ 18.5
ATP2A2-204ENST00000539276 EIF2AK2P19525 551 aaKnown RBP16.9■□□□□ 0.3
ATP2A2-204ENST00000539276 CHRNA3P32297 505 aa16.9■□□□□ 0.3
ATP2A2-204ENST00000539276 DMP1Q13316 513 aaPredicted RBP16.9■□□□□ 0.3
ATP2A2-204ENST00000539276 COG2Q14746 738 aa16.9■□□□□ 0.3
ATP2A2-204ENST00000539276 RINT1Q6NUQ1 792 aa16.9■□□□□ 0.3
ATP2A2-204ENST00000539276 C18orf8Q96DM3 657 aa16.9■□□□□ 0.3
ATP2A2-204ENST00000539276 IPO5O00410 1097 aaKnown RBP16.89■□□□□ 0.29
ATP2A2-204ENST00000539276 RNF207Q6ZRF8 634 aa16.89■□□□□ 0.29
ATP2A2-204ENST00000539276 IQCKQ8N0W5 287 aa16.89■□□□□ 0.29
ATP2A2-204ENST00000539276 PPP1R9AQ9ULJ8 1098 aa16.89■□□□□ 0.29
ATP2A2-204ENST00000539276 DIS3Q9Y2L1 958 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms