RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 ACCSQ96QU6 501 aa16.97■□□□□ 0.31
VAMP1-207ENST00000539047 ST6GALNAC4Q9H4F1 302 aa16.97■□□□□ 0.31
VAMP1-207ENST00000539047 SLC16A4O15374 487 aa16.96■□□□□ 0.31
VAMP1-207ENST00000539047 ASAP2O43150 1006 aa16.96■□□□□ 0.31
VAMP1-207ENST00000539047 CABYRO75952 493 aa16.96■□□□□ 0.31
VAMP1-207ENST00000539047 C22orf31O95567 290 aa16.96■□□□□ 0.31
VAMP1-207ENST00000539047 SMIM10L2AP0DMW4 78 aa16.96■□□□□ 0.31
VAMP1-207ENST00000539047 SMIM10L2BP0DMW5 78 aa16.96■□□□□ 0.31
VAMP1-207ENST00000539047 RPL13P26373 211 aaKnown RBP16.96■□□□□ 0.31
VAMP1-207ENST00000539047 NPTX2P47972 431 aa16.96■□□□□ 0.31
VAMP1-207ENST00000539047 STRN3Q13033 797 aa16.96■□□□□ 0.31
VAMP1-207ENST00000539047 CENPPQ6IPU0 288 aa16.96■□□□□ 0.31
VAMP1-207ENST00000539047 EFCAB12Q6NXP0 572 aa16.96■□□□□ 0.31
VAMP1-207ENST00000539047 HAUS6Q7Z4H7 955 aa16.96■□□□□ 0.31
VAMP1-207ENST00000539047 ZNF507Q8TCN5 953 aa16.96■□□□□ 0.31
VAMP1-207ENST00000539047 CEP89Q96ST8 783 aa16.96■□□□□ 0.31
VAMP1-207ENST00000539047 C2orf40Q9H1Z8 148 aa16.96■□□□□ 0.31
VAMP1-207ENST00000539047 THAP9Q9H5L6 903 aa16.96■□□□□ 0.31
VAMP1-207ENST00000539047 POLD4Q9HCU8 107 aa16.96■□□□□ 0.31
VAMP1-207ENST00000539047 TYW1Q9NV66 732 aaKnown RBP16.96■□□□□ 0.31
VAMP1-207ENST00000539047 CGNQ9P2M7 1197 aaKnown RBP16.96■□□□□ 0.31
VAMP1-207ENST00000539047 TRIM49BA6NDI0 452 aa16.95■□□□□ 0.3
VAMP1-207ENST00000539047 ZBTB42B2RXF5 422 aa16.95■□□□□ 0.3
VAMP1-207ENST00000539047 PDXKO00764 312 aa16.95■□□□□ 0.3
VAMP1-207ENST00000539047 CBFA2T2O43439 604 aa16.95■□□□□ 0.3
VAMP1-207ENST00000539047 ADAMTS4O75173 837 aa16.95■□□□□ 0.3
VAMP1-207ENST00000539047 PRPF6O94906 941 aaKnown RBP16.95■□□□□ 0.3
VAMP1-207ENST00000539047 SERPINC1P01008 464 aa16.95■□□□□ 0.3
VAMP1-207ENST00000539047 KLRC1P26715 233 aa16.95■□□□□ 0.3
VAMP1-207ENST00000539047 ARL2P36404 184 aa16.95■□□□□ 0.3
VAMP1-207ENST00000539047 CASP5P51878 434 aa16.95■□□□□ 0.3
VAMP1-207ENST00000539047 EFNA5P52803 228 aa16.95■□□□□ 0.3
VAMP1-207ENST00000539047 HSP90AA2PQ14568 343 aaPredicted RBP16.95■□□□□ 0.3
VAMP1-207ENST00000539047 NCAPHQ15003 741 aa16.95■□□□□ 0.3
VAMP1-207ENST00000539047 EDRF1Q3B7T1 1238 aa16.95■□□□□ 0.3
VAMP1-207ENST00000539047 TTI2Q6NXR4 508 aa16.95■□□□□ 0.3
VAMP1-207ENST00000539047 MTHFD1LQ6UB35 978 aa16.95■□□□□ 0.3
VAMP1-207ENST00000539047 LRRC71Q8N4P6 559 aa16.95■□□□□ 0.3
VAMP1-207ENST00000539047 ARRDC4Q8NCT1 418 aa16.95■□□□□ 0.3
VAMP1-207ENST00000539047 TRAPPC12Q8WVT3 735 aa16.95■□□□□ 0.3
VAMP1-207ENST00000539047 SCLT1Q96NL6 688 aa16.95■□□□□ 0.3
VAMP1-207ENST00000539047 TRIM5Q9C035 493 aa16.95■□□□□ 0.3
VAMP1-207ENST00000539047 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.95■□□□□ 0.3
VAMP1-207ENST00000539047 FANCLQ9NW38 375 aa16.95■□□□□ 0.3
VAMP1-207ENST00000539047 SUCLA2Q9P2R7 463 aaPredicted RBP16.95■□□□□ 0.3
VAMP1-207ENST00000539047 AKT3Q9Y243 479 aa16.95■□□□□ 0.3
VAMP1-207ENST00000539047 SCN10AQ9Y5Y9 1956 aa16.95■□□□□ 0.3
VAMP1-207ENST00000539047 IGKV6-21A0A0C4DH24 114 aa16.94■□□□□ 0.3
VAMP1-207ENST00000539047 C17orf102A2RUQ5 167 aa16.94■□□□□ 0.3
VAMP1-207ENST00000539047 DENND3A2RUS2 1198 aa16.94■□□□□ 0.3
VAMP1-207ENST00000539047 KBTBD13C9JR72 458 aa16.94■□□□□ 0.3
VAMP1-207ENST00000539047 HAS3O00219 553 aa16.94■□□□□ 0.3
VAMP1-207ENST00000539047 SOX10P56693 466 aa16.94■□□□□ 0.3
VAMP1-207ENST00000539047 SNRPFP62306 86 aaKnown RBP16.94■□□□□ 0.3
VAMP1-207ENST00000539047 CDC42EP1Q00587 391 aa16.94■□□□□ 0.3
VAMP1-207ENST00000539047 FKBP3Q00688 224 aaKnown RBP16.94■□□□□ 0.3
VAMP1-207ENST00000539047 FILIP1LQ4L180 1135 aa16.94■□□□□ 0.3
VAMP1-207ENST00000539047 ANKRD40Q6AI12 368 aa16.94■□□□□ 0.3
VAMP1-207ENST00000539047 CTU1Q7Z7A3 348 aaKnown RBP16.94■□□□□ 0.3
VAMP1-207ENST00000539047 GLIS3Q8NEA6 775 aa16.94■□□□□ 0.3
VAMP1-207ENST00000539047 KAT2BQ92831 832 aa16.94■□□□□ 0.3
VAMP1-207ENST00000539047 BICD1Q96G01 975 aa16.94■□□□□ 0.3
VAMP1-207ENST00000539047 CTAGE1Q96RT6 745 aa16.94■□□□□ 0.3
VAMP1-207ENST00000539047 NTPCRQ9BSD7 190 aaKnown RBP16.94■□□□□ 0.3
VAMP1-207ENST00000539047 FGFBP2Q9BYJ0 223 aa16.94■□□□□ 0.3
VAMP1-207ENST00000539047 GBP3Q9H0R5 595 aa16.94■□□□□ 0.3
VAMP1-207ENST00000539047 SEMA6BQ9H3T3 888 aa16.94■□□□□ 0.3
VAMP1-207ENST00000539047 MYADML2A6NDP7 307 aa16.93■□□□□ 0.3
VAMP1-207ENST00000539047 MOXD2PA6NHM9 499 aa16.93■□□□□ 0.3
VAMP1-207ENST00000539047 CETN3O15182 167 aa16.93■□□□□ 0.3
VAMP1-207ENST00000539047 GNA14O95837 355 aa16.93■□□□□ 0.3
VAMP1-207ENST00000539047 RPLP2P05387 115 aaKnown RBP16.93■□□□□ 0.3
VAMP1-207ENST00000539047 GLRA2P23416 452 aa16.93■□□□□ 0.3
VAMP1-207ENST00000539047 EEF1GP26641 437 aaKnown RBP16.93■□□□□ 0.3
VAMP1-207ENST00000539047 PHKA2P46019 1235 aa16.93■□□□□ 0.3
VAMP1-207ENST00000539047 CLCN3P51790 818 aa16.93■□□□□ 0.3
VAMP1-207ENST00000539047 GTF2BQ00403 316 aa16.93■□□□□ 0.3
VAMP1-207ENST00000539047 LAMTOR4Q0VGL1 99 aa16.93■□□□□ 0.3
VAMP1-207ENST00000539047 ZC2HC1CQ53FD0 456 aaPredicted RBP16.93■□□□□ 0.3
VAMP1-207ENST00000539047 NFRKBQ6P4R8 1299 aa16.93■□□□□ 0.3
VAMP1-207ENST00000539047 SARM1Q6SZW1 724 aa16.93■□□□□ 0.3
VAMP1-207ENST00000539047 RHPN2Q8IUC4 686 aa16.93■□□□□ 0.3
VAMP1-207ENST00000539047 TMEM161BQ8NDZ6 487 aa16.93■□□□□ 0.3
VAMP1-207ENST00000539047 ASAP3Q8TDY4 903 aa16.93■□□□□ 0.3
VAMP1-207ENST00000539047 SH3TC2Q8TF17 1288 aa16.93■□□□□ 0.3
VAMP1-207ENST00000539047 LMBR1Q8WVP7 490 aa16.93■□□□□ 0.3
VAMP1-207ENST00000539047 PRPF31Q8WWY3 499 aaKnown RBP16.93■□□□□ 0.3
VAMP1-207ENST00000539047 CEP63Q96MT8 703 aa16.93■□□□□ 0.3
VAMP1-207ENST00000539047 TSEN34Q9BSV6 310 aaKnown RBP16.93■□□□□ 0.3
VAMP1-207ENST00000539047 SRRTQ9BXP5 876 aaKnown RBP16.93■□□□□ 0.3
VAMP1-207ENST00000539047 SETD4Q9NVD3 440 aa16.93■□□□□ 0.3
VAMP1-207ENST00000539047 KCNJ18B7U540 433 aa16.92■□□□□ 0.3
VAMP1-207ENST00000539047 K7ERI5 159 aa16.92■□□□□ 0.3
VAMP1-207ENST00000539047 PPP1R37O75864 691 aa16.92■□□□□ 0.3
VAMP1-207ENST00000539047 ASGR1P07306 291 aa16.92■□□□□ 0.3
VAMP1-207ENST00000539047 CAPSQ13938 189 aa16.92■□□□□ 0.3
VAMP1-207ENST00000539047 KCNJ12Q14500 433 aa16.92■□□□□ 0.3
VAMP1-207ENST00000539047 KCNA10Q16322 511 aa16.92■□□□□ 0.3
VAMP1-207ENST00000539047 PKN2Q16513 984 aaKnown RBP16.92■□□□□ 0.3
VAMP1-207ENST00000539047 CCDC40Q4G0X9 1142 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms