RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 TPM2P07951 284 aa11.75□□□□□ -0.53
TNFRSF1A-211ENST00000538363 SRGAP2CP0DJJ0 459 aa11.75□□□□□ -0.53
TNFRSF1A-211ENST00000538363 CYP2C9P11712 490 aa11.75□□□□□ -0.53
TNFRSF1A-211ENST00000538363 CCL5P13501 91 aa11.75□□□□□ -0.53
TNFRSF1A-211ENST00000538363 PRCPP42785 496 aa11.75□□□□□ -0.53
TNFRSF1A-211ENST00000538363 MATR3P43243 847 aaKnown RBP eCLIP11.75□□□□□ -0.53
TNFRSF1A-211ENST00000538363 IRX5P78411 483 aaPredicted RBP11.75□□□□□ -0.53
TNFRSF1A-211ENST00000538363 PURAQ00577 322 aaKnown RBP11.75□□□□□ -0.53
TNFRSF1A-211ENST00000538363 STK4Q13043 487 aa11.75□□□□□ -0.53
TNFRSF1A-211ENST00000538363 MXD4Q14582 209 aaPredicted RBP11.75□□□□□ -0.53
TNFRSF1A-211ENST00000538363 MAP3K21Q5TCX8 1036 aa11.75□□□□□ -0.53
TNFRSF1A-211ENST00000538363 RSPH3Q86UC2 560 aa11.75□□□□□ -0.53
TNFRSF1A-211ENST00000538363 RHPN2Q8IUC4 686 aa11.75□□□□□ -0.53
TNFRSF1A-211ENST00000538363 LRRC71Q8N4P6 559 aa11.75□□□□□ -0.53
TNFRSF1A-211ENST00000538363 NOC3LQ8WTT2 800 aaKnown RBP11.75□□□□□ -0.53
TNFRSF1A-211ENST00000538363 DEFB118Q96PH6 123 aa11.75□□□□□ -0.53
TNFRSF1A-211ENST00000538363 ACCSQ96QU6 501 aa11.75□□□□□ -0.53
TNFRSF1A-211ENST00000538363 FUCA2Q9BTY2 467 aa11.75□□□□□ -0.53
TNFRSF1A-211ENST00000538363 RBSNQ9H1K0 784 aa11.75□□□□□ -0.53
TNFRSF1A-211ENST00000538363 CBX8Q9HC52 389 aa11.75□□□□□ -0.53
TNFRSF1A-211ENST00000538363 NRCAMQ92823 1304 aa11.75□□□□□ -0.53
TNFRSF1A-211ENST00000538363 MYADML2A6NDP7 307 aa11.74□□□□□ -0.53
TNFRSF1A-211ENST00000538363 K7ERI5 159 aa11.74□□□□□ -0.53
TNFRSF1A-211ENST00000538363 PRPF6O94906 941 aaKnown RBP11.74□□□□□ -0.53
TNFRSF1A-211ENST00000538363 F2P00734 622 aa11.74□□□□□ -0.53
TNFRSF1A-211ENST00000538363 IGHA2P01877 340 aa11.74□□□□□ -0.53
TNFRSF1A-211ENST00000538363 NMT1P30419 496 aaKnown RBP11.74□□□□□ -0.53
TNFRSF1A-211ENST00000538363 PSEN1P49768 467 aa11.74□□□□□ -0.53
TNFRSF1A-211ENST00000538363 SOX10P56693 466 aa11.74□□□□□ -0.53
TNFRSF1A-211ENST00000538363 MYL5Q02045 173 aa11.74□□□□□ -0.53
TNFRSF1A-211ENST00000538363 TARBP2Q15633 366 aaKnown RBP11.74□□□□□ -0.53
TNFRSF1A-211ENST00000538363 NFRKBQ6P4R8 1299 aa11.74□□□□□ -0.53
TNFRSF1A-211ENST00000538363 MTHFD1LQ6UB35 978 aa11.74□□□□□ -0.53
TNFRSF1A-211ENST00000538363 HS2ST1Q7LGA3 356 aa11.74□□□□□ -0.53
TNFRSF1A-211ENST00000538363 LUZP1Q86V48 1076 aa11.74□□□□□ -0.53
TNFRSF1A-211ENST00000538363 PRPF31Q8WWY3 499 aaKnown RBP11.74□□□□□ -0.53
TNFRSF1A-211ENST00000538363 NLRP7Q8WX94 980 aa11.74□□□□□ -0.53
TNFRSF1A-211ENST00000538363 P2RX5Q93086 422 aa11.74□□□□□ -0.53
TNFRSF1A-211ENST00000538363 NLRP4Q96MN2 994 aa11.74□□□□□ -0.53
TNFRSF1A-211ENST00000538363 TSEN34Q9BSV6 310 aaKnown RBP11.74□□□□□ -0.53
TNFRSF1A-211ENST00000538363 FAM49AQ9H0Q0 323 aaPredicted RBP11.74□□□□□ -0.53
TNFRSF1A-211ENST00000538363 DHX33Q9H6R0 707 aaKnown RBP11.74□□□□□ -0.53
TNFRSF1A-211ENST00000538363 TMEM206Q9H813 350 aa11.74□□□□□ -0.53
TNFRSF1A-211ENST00000538363 HDAC6Q9UBN7 1215 aa11.74□□□□□ -0.53
TNFRSF1A-211ENST00000538363 RWDD2AQ9UIY3 292 aa11.74□□□□□ -0.53
TNFRSF1A-211ENST00000538363 MOXD2PA6NHM9 499 aa11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 PPP1R3GB7ZBB8 358 aa11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 PES1O00541 588 aaKnown RBP11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 RIOK3O14730 519 aaKnown RBP11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 MYBP10242 640 aa11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 MAPTP10636 758 aaKnown RBP11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 HOXD8P13378 290 aaPredicted RBP11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 CCNE1P24864 410 aa11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 RPL13P26373 211 aaKnown RBP11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 NAMPTP43490 491 aa11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 PHKA2P46019 1235 aa11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 MRE11P49959 708 aa11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 CLCN3P51790 818 aa11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 ACLYP53396 1101 aa11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 RTP1P59025 263 aa11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 CDC42EP1Q00587 391 aa11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 NCBP1Q09161 790 aaKnown RBP11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 PDAP1Q13442 181 aaKnown RBP11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 UVSSAQ2YD98 709 aa11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 NBPF20Q3BBV1 942 aa11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 SPATA1Q5VX52 437 aa11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 HAUS6Q7Z4H7 955 aa11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 GAS2L3Q86XJ1 694 aa11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 FAM114A1Q8IWE2 563 aa11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 ADSSL1Q8N142 457 aa11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 GUF1Q8N442 669 aaKnown RBP11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 PPP1R13LQ8WUF5 828 aa11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 PPP1R16BQ96T49 567 aa11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 BPIFA3Q9BQP9 254 aa11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 C2orf40Q9H1Z8 148 aa11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 GRPEL1Q9HAV7 217 aa11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 STARD7Q9NQZ5 370 aa11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 OLFML3Q9NRN5 406 aa11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 GINS2Q9Y248 185 aa11.73□□□□□ -0.53
TNFRSF1A-211ENST00000538363 PHLPP2Q6ZVD8 1323 aa11.72□□□□□ -0.53
TNFRSF1A-211ENST00000538363 FRMD3A2A2Y4 597 aa11.72□□□□□ -0.53
TNFRSF1A-211ENST00000538363 DENND3A2RUS2 1198 aa11.72□□□□□ -0.53
TNFRSF1A-211ENST00000538363 EIF3DO15371 548 aaKnown RBP eCLIP11.72□□□□□ -0.53
TNFRSF1A-211ENST00000538363 ADAMTS4O75173 837 aa11.72□□□□□ -0.53
TNFRSF1A-211ENST00000538363 C22orf31O95567 290 aa11.72□□□□□ -0.53
TNFRSF1A-211ENST00000538363 SERPINC1P01008 464 aa11.72□□□□□ -0.53
TNFRSF1A-211ENST00000538363 BMP6P22004 513 aa11.72□□□□□ -0.53
TNFRSF1A-211ENST00000538363 SCP2P22307 547 aa11.72□□□□□ -0.53
TNFRSF1A-211ENST00000538363 CST5P28325 142 aaPredicted RBP11.72□□□□□ -0.53
TNFRSF1A-211ENST00000538363 ARL2P36404 184 aa11.72□□□□□ -0.53
TNFRSF1A-211ENST00000538363 NPTX2P47972 431 aa11.72□□□□□ -0.53
TNFRSF1A-211ENST00000538363 ZNF131P52739 623 aa11.72□□□□□ -0.53
TNFRSF1A-211ENST00000538363 EFNA5P52803 228 aa11.72□□□□□ -0.53
TNFRSF1A-211ENST00000538363 LAMTOR4Q0VGL1 99 aa11.72□□□□□ -0.53
TNFRSF1A-211ENST00000538363 ITGA7Q13683 1181 aa11.72□□□□□ -0.53
TNFRSF1A-211ENST00000538363 KNOP1Q1ED39 458 aaKnown RBP11.72□□□□□ -0.53
TNFRSF1A-211ENST00000538363 ZC2HC1CQ53FD0 456 aaPredicted RBP11.72□□□□□ -0.53
TNFRSF1A-211ENST00000538363 ZNF720Q7Z2F6 126 aa11.72□□□□□ -0.53
TNFRSF1A-211ENST00000538363 CSGALNACT2Q8N6G5 542 aa11.72□□□□□ -0.53
TNFRSF1A-211ENST00000538363 RNF149Q8NC42 400 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms