RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 NNTQ13423 1086 aa17.95■□□□□ 0.46
SCARB1-205ENST00000538291 VEPH1Q14D04 833 aa17.95■□□□□ 0.46
SCARB1-205ENST00000538291 QRICH1Q2TAL8 776 aa17.95■□□□□ 0.46
SCARB1-205ENST00000538291 ENAHQ8N8S7 591 aaPredicted RBP17.95■□□□□ 0.46
SCARB1-205ENST00000538291 UPF3AQ9H1J1 476 aaKnown RBP17.95■□□□□ 0.46
SCARB1-205ENST00000538291 SAYSD1Q9NPB0 183 aa17.95■□□□□ 0.46
SCARB1-205ENST00000538291 HEY1Q9Y5J3 304 aa17.95■□□□□ 0.46
SCARB1-205ENST00000538291 SAMD9LQ8IVG5 1584 aa17.95■□□□□ 0.46
SCARB1-205ENST00000538291 KRT38O76015 456 aa17.95■□□□□ 0.46
SCARB1-205ENST00000538291 EPHA10Q5JZY3 1008 aa17.95■□□□□ 0.46
SCARB1-205ENST00000538291 ALS2CLQ60I27 953 aa17.95■□□□□ 0.46
SCARB1-205ENST00000538291 ZC3H15Q8WU90 426 aaKnown RBP17.95■□□□□ 0.46
SCARB1-205ENST00000538291 CYP26B1Q9NR63 512 aa17.95■□□□□ 0.46
SCARB1-205ENST00000538291 FAF1Q9UNN5 650 aaPredicted RBP17.95■□□□□ 0.46
SCARB1-205ENST00000538291 WDR19Q8NEZ3 1342 aa17.95■□□□□ 0.46
SCARB1-205ENST00000538291 CYP19A1P11511 503 aaPredicted RBP17.95■□□□□ 0.46
SCARB1-205ENST00000538291 ESRRGP62508 458 aa17.95■□□□□ 0.46
SCARB1-205ENST00000538291 COASYQ13057 564 aa17.95■□□□□ 0.46
SCARB1-205ENST00000538291 TEX2Q8IWB9 1127 aa17.95■□□□□ 0.46
SCARB1-205ENST00000538291 C11orf70Q9BRQ4 267 aa17.95■□□□□ 0.46
SCARB1-205ENST00000538291 RAD51Q06609 339 aa17.95■□□□□ 0.46
SCARB1-205ENST00000538291 CPDO75976 1380 aa17.94■□□□□ 0.46
SCARB1-205ENST00000538291 SEC31AO94979 1220 aaKnown RBP17.94■□□□□ 0.46
SCARB1-205ENST00000538291 KIF19Q2TAC6 998 aa17.94■□□□□ 0.46
SCARB1-205ENST00000538291 KCNV1Q6PIU1 500 aa17.94■□□□□ 0.46
SCARB1-205ENST00000538291 MAML1Q92585 1016 aa17.94■□□□□ 0.46
SCARB1-205ENST00000538291 POTEB3A0JP26 581 aa17.94■□□□□ 0.46
SCARB1-205ENST00000538291 POTECB2RU33 542 aa17.94■□□□□ 0.46
SCARB1-205ENST00000538291 SNAP23O00161 211 aa17.94■□□□□ 0.46
SCARB1-205ENST00000538291 TNPO2O14787 897 aaKnown RBP17.94■□□□□ 0.46
SCARB1-205ENST00000538291 CREB3O43889 395 aa17.94■□□□□ 0.46
SCARB1-205ENST00000538291 ACSL3O95573 720 aa17.94■□□□□ 0.46
SCARB1-205ENST00000538291 APOEP02649 317 aa17.94■□□□□ 0.46
SCARB1-205ENST00000538291 CPB1P15086 417 aa17.94■□□□□ 0.46
SCARB1-205ENST00000538291 VAMP7P51809 220 aa17.94■□□□□ 0.46
SCARB1-205ENST00000538291 TXNRD1Q16881 649 aa17.94■□□□□ 0.46
SCARB1-205ENST00000538291 KNOP1Q1ED39 458 aaKnown RBP17.94■□□□□ 0.46
SCARB1-205ENST00000538291 POTEBQ6S5H4 581 aa17.94■□□□□ 0.46
SCARB1-205ENST00000538291 CRLF3Q8IUI8 442 aa17.94■□□□□ 0.46
SCARB1-205ENST00000538291 TTC30BQ8N4P2 665 aa17.94■□□□□ 0.46
SCARB1-205ENST00000538291 DNAJC17Q9NVM6 304 aaKnown RBP17.94■□□□□ 0.46
SCARB1-205ENST00000538291 COPEO14579 308 aa17.94■□□□□ 0.46
SCARB1-205ENST00000538291 KYAT1Q16773 422 aa17.94■□□□□ 0.46
SCARB1-205ENST00000538291 ASIC4Q96FT7 647 aa17.94■□□□□ 0.46
SCARB1-205ENST00000538291 SHROOM2Q13796 1616 aa17.94■□□□□ 0.46
SCARB1-205ENST00000538291 MAP2K2P36507 400 aa17.94■□□□□ 0.46
SCARB1-205ENST00000538291 ZNF212Q9UDV6 495 aa17.94■□□□□ 0.46
SCARB1-205ENST00000538291 CXorf38Q8TB03 319 aa17.94■□□□□ 0.46
SCARB1-205ENST00000538291 ZNF560Q96MR9 790 aa17.94■□□□□ 0.46
SCARB1-205ENST00000538291 TRIM62Q9BVG3 475 aa17.94■□□□□ 0.46
SCARB1-205ENST00000538291 TRIM15Q9C019 465 aa17.94■□□□□ 0.46
SCARB1-205ENST00000538291 TTC37Q6PGP7 1564 aa17.93■□□□□ 0.46
SCARB1-205ENST00000538291 NMT2O60551 498 aa17.93■□□□□ 0.46
SCARB1-205ENST00000538291 TMCC1O94876 653 aa17.93■□□□□ 0.46
SCARB1-205ENST00000538291 GLE1Q53GS7 698 aaKnown RBP17.93■□□□□ 0.46
SCARB1-205ENST00000538291 EFHC2Q5JST6 749 aa17.93■□□□□ 0.46
SCARB1-205ENST00000538291 PREX2Q70Z35 1606 aa17.93■□□□□ 0.46
SCARB1-205ENST00000538291 ESRRAP11474 423 aaPredicted RBP17.93■□□□□ 0.46
SCARB1-205ENST00000538291 KCNH2Q12809 1159 aa17.93■□□□□ 0.46
SCARB1-205ENST00000538291 SKIV2LQ15477 1246 aaKnown RBP17.93■□□□□ 0.46
SCARB1-205ENST00000538291 CYB5R4Q7L1T6 521 aa17.93■□□□□ 0.46
SCARB1-205ENST00000538291 ADGRF4Q8IZF3 695 aa17.93■□□□□ 0.46
SCARB1-205ENST00000538291 TMEM260Q9NX78 707 aa17.93■□□□□ 0.46
SCARB1-205ENST00000538291 CCDC151A5D8V7 595 aa17.93■□□□□ 0.46
SCARB1-205ENST00000538291 LGALS16A8MUM7 142 aa17.93■□□□□ 0.46
SCARB1-205ENST00000538291 A8MXQ7 604 aa17.93■□□□□ 0.46
SCARB1-205ENST00000538291 ARHGDIAP52565 204 aa17.93■□□□□ 0.46
SCARB1-205ENST00000538291 PSMC1P62191 440 aaKnown RBP17.93■□□□□ 0.46
SCARB1-205ENST00000538291 MXD4Q14582 209 aaPredicted RBP17.93■□□□□ 0.46
SCARB1-205ENST00000538291 RAET1EQ8TD07 263 aa17.93■□□□□ 0.46
SCARB1-205ENST00000538291 ULK4Q96C45 1275 aa17.93■□□□□ 0.46
SCARB1-205ENST00000538291 LXNQ9BS40 222 aa17.93■□□□□ 0.46
SCARB1-205ENST00000538291 HEMGNQ9BXL5 484 aa17.93■□□□□ 0.46
SCARB1-205ENST00000538291 AP3M2P53677 418 aa17.93■□□□□ 0.46
SCARB1-205ENST00000538291 ACCSLQ4AC99 568 aa17.93■□□□□ 0.46
SCARB1-205ENST00000538291 NAALADL2Q58DX5 795 aa17.93■□□□□ 0.46
SCARB1-205ENST00000538291 SZRD1Q7Z422 152 aa17.93■□□□□ 0.46
SCARB1-205ENST00000538291 WDR75Q8IWA0 830 aaKnown RBP17.93■□□□□ 0.46
SCARB1-205ENST00000538291 SP110Q9HB58 689 aa17.93■□□□□ 0.46
SCARB1-205ENST00000538291 BARHL2Q9NY43 387 aa17.93■□□□□ 0.46
SCARB1-205ENST00000538291 CPSF1Q10570 1443 aaKnown RBP17.92■□□□□ 0.46
SCARB1-205ENST00000538291 KPNA7A9QM74 516 aa17.92■□□□□ 0.46
SCARB1-205ENST00000538291 PTK2BQ14289 1009 aa17.92■□□□□ 0.46
SCARB1-205ENST00000538291 FAM217BQ9NTX9 383 aaPredicted RBP17.92■□□□□ 0.46
SCARB1-205ENST00000538291 CDC42BPGQ6DT37 1551 aa17.92■□□□□ 0.46
SCARB1-205ENST00000538291 NUDT18Q6ZVK8 323 aa17.92■□□□□ 0.46
SCARB1-205ENST00000538291 FBXO41Q8TF61 875 aa17.92■□□□□ 0.46
SCARB1-205ENST00000538291 RPAP3Q9H6T3 665 aaPredicted RBP17.92■□□□□ 0.46
SCARB1-205ENST00000538291 XAB2Q9HCS7 855 aaKnown RBP17.92■□□□□ 0.46
SCARB1-205ENST00000538291 ZCCHC11Q5TAX3 1644 aaKnown RBP17.92■□□□□ 0.46
SCARB1-205ENST00000538291 ALX1Q15699 326 aa17.92■□□□□ 0.46
SCARB1-205ENST00000538291 MAP3K20Q9NYL2 800 aaKnown RBP17.92■□□□□ 0.46
SCARB1-205ENST00000538291 SUGT1Q9Y2Z0 365 aa17.92■□□□□ 0.46
SCARB1-205ENST00000538291 CD2BP2O95400 341 aaKnown RBP17.92■□□□□ 0.46
SCARB1-205ENST00000538291 KRT7P08729 469 aa17.92■□□□□ 0.46
SCARB1-205ENST00000538291 ATP1A3P13637 1013 aa17.92■□□□□ 0.46
SCARB1-205ENST00000538291 GNA15P30679 374 aa17.92■□□□□ 0.46
SCARB1-205ENST00000538291 TMPRSS15P98073 1019 aa17.92■□□□□ 0.46
SCARB1-205ENST00000538291 ITPRIPL1Q6GPH6 555 aa17.92■□□□□ 0.46
SCARB1-205ENST00000538291 SPON2Q9BUD6 331 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms