RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 CHMP2AO43633 222 aa10.09□□□□□ -0.79
DDB1-211ENST00000538280 NCK2O43639 380 aa10.09□□□□□ -0.79
DDB1-211ENST00000538280 BUB1O43683 1085 aa10.09□□□□□ -0.79
DDB1-211ENST00000538280 PALMO75781 387 aa10.09□□□□□ -0.79
DDB1-211ENST00000538280 FERP16591 822 aa10.09□□□□□ -0.79
DDB1-211ENST00000538280 ITGB5P18084 799 aa10.09□□□□□ -0.79
DDB1-211ENST00000538280 EN2P19622 333 aaPredicted RBP10.09□□□□□ -0.79
DDB1-211ENST00000538280 UBXN2AP68543 259 aa10.09□□□□□ -0.79
DDB1-211ENST00000538280 PTK2Q05397 1052 aa10.09□□□□□ -0.79
DDB1-211ENST00000538280 CRHR2Q13324 411 aa10.09□□□□□ -0.79
DDB1-211ENST00000538280 ALCAMQ13740 583 aa10.09□□□□□ -0.79
DDB1-211ENST00000538280 GLE1Q53GS7 698 aaKnown RBP10.09□□□□□ -0.79
DDB1-211ENST00000538280 NBPF12Q5TAG4 269 aaPredicted RBP10.09□□□□□ -0.79
DDB1-211ENST00000538280 PCNX4Q63HM2 1172 aa10.09□□□□□ -0.79
DDB1-211ENST00000538280 MCF2L2Q86YR7 1114 aa10.09□□□□□ -0.79
DDB1-211ENST00000538280 GPIHBP1Q8IV16 184 aa10.09□□□□□ -0.79
DDB1-211ENST00000538280 FAM186BQ8IYM0 893 aa10.09□□□□□ -0.79
DDB1-211ENST00000538280 MYCT1Q8N699 235 aa10.09□□□□□ -0.79
DDB1-211ENST00000538280 PRPF38AQ8NAV1 312 aaKnown RBP10.09□□□□□ -0.79
DDB1-211ENST00000538280 FAM71BQ8TC56 605 aa10.09□□□□□ -0.79
DDB1-211ENST00000538280 CNKSR2Q8WXI2 1034 aa10.09□□□□□ -0.79
DDB1-211ENST00000538280 EXOC4Q96A65 974 aa10.09□□□□□ -0.79
DDB1-211ENST00000538280 AGBL1Q96MI9 1066 aa10.09□□□□□ -0.79
DDB1-211ENST00000538280 PTPN18Q99952 460 aa10.09□□□□□ -0.79
DDB1-211ENST00000538280 LXNQ9BS40 222 aa10.09□□□□□ -0.79
DDB1-211ENST00000538280 ST6GALNAC4Q9H4F1 302 aa10.09□□□□□ -0.79
DDB1-211ENST00000538280 SLC38A10Q9HBR0 1119 aa10.09□□□□□ -0.79
DDB1-211ENST00000538280 AGO4Q9HCK5 861 aaKnown RBP10.09□□□□□ -0.79
DDB1-211ENST00000538280 MED4Q9NPJ6 270 aa10.09□□□□□ -0.79
DDB1-211ENST00000538280 AGPAT3Q9NRZ7 376 aa10.09□□□□□ -0.79
DDB1-211ENST00000538280 NAGPAQ9UK23 515 aa10.09□□□□□ -0.79
DDB1-211ENST00000538280 PNMA2Q9UL42 364 aa10.09□□□□□ -0.79
DDB1-211ENST00000538280 CCPG1Q9ULG6 757 aa10.09□□□□□ -0.79
DDB1-211ENST00000538280 HPCAL4Q9UM19 191 aa10.09□□□□□ -0.79
DDB1-211ENST00000538280 ARID2Q68CP9 1835 aa10.09□□□□□ -0.79
DDB1-211ENST00000538280 RLFQ13129 1914 aa10.09□□□□□ -0.79
DDB1-211ENST00000538280 PHIPQ8WWQ0 1821 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 ARHGEF35A5YM69 484 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 SFI1A8K8P3 1242 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 BHMG1C9JSJ3 638 aaPredicted RBP10.08□□□□□ -0.8
DDB1-211ENST00000538280 ZBTB39O15060 712 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 POLR3GO15318 223 aaPredicted RBP10.08□□□□□ -0.8
DDB1-211ENST00000538280 P4HBP07237 508 aaKnown RBP10.08□□□□□ -0.8
DDB1-211ENST00000538280 MYBL2P10244 700 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 PAFAH1B1P43034 410 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 FMO5P49326 533 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 ITGB3BPQ13352 177 aaPredicted RBP10.08□□□□□ -0.8
DDB1-211ENST00000538280 ZYXQ15942 572 aaKnown RBP10.08□□□□□ -0.8
DDB1-211ENST00000538280 TKFCQ3LXA3 575 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 ZC2HC1CQ53FD0 456 aaPredicted RBP10.08□□□□□ -0.8
DDB1-211ENST00000538280 DCAF17Q5H9S7 520 aaPredicted RBP10.08□□□□□ -0.8
DDB1-211ENST00000538280 CCDC70Q6NSX1 233 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 MIGA2Q7L4E1 593 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 MIER3Q7Z3K6 550 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 SLFN11Q7Z7L1 901 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 FAM178BQ8IXR5 827 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 ANKRD13CQ8N6S4 541 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 LRRC57Q8N9N7 239 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 IL31RAQ8NI17 732 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 SLC30A5Q8TAD4 765 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 SYTL5Q8TDW5 730 aaPredicted RBP10.08□□□□□ -0.8
DDB1-211ENST00000538280 HOOK2Q96ED9 719 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 DRC1Q96MC2 740 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 SPAG5Q96R06 1193 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 LRRC1Q9BTT6 524 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 TIPINQ9BVW5 301 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 PACSIN1Q9BY11 444 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 ZNF341Q9BYN7 854 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 GPR88Q9GZN0 384 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 IKZF4Q9H2S9 585 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 ZCCHC17Q9NP64 241 aaKnown RBP10.08□□□□□ -0.8
DDB1-211ENST00000538280 GCNT4Q9P109 453 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 ADAMTS1Q9UHI8 967 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 TMEM59LQ9UK28 342 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 USP20Q9Y2K6 914 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 STXBP5LQ9Y2K9 1186 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 PTPN22Q9Y2R2 807 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 PCDHB13Q9Y5F0 798 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 MYH10P35580 1976 aa10.08□□□□□ -0.8
DDB1-211ENST00000538280 NCANO14594 1321 aa10.07□□□□□ -0.8
DDB1-211ENST00000538280 MANSC4A6NHS7 340 aaPredicted RBP10.07□□□□□ -0.8
DDB1-211ENST00000538280 DDX3XO00571 662 aaKnown RBP eCLIP10.07□□□□□ -0.8
DDB1-211ENST00000538280 NFIBO00712 420 aa10.07□□□□□ -0.8
DDB1-211ENST00000538280 MAPK13O15264 365 aa10.07□□□□□ -0.8
DDB1-211ENST00000538280 PMM2O15305 246 aa10.07□□□□□ -0.8
DDB1-211ENST00000538280 PPP1R12BO60237 982 aaPredicted RBP10.07□□□□□ -0.8
DDB1-211ENST00000538280 HIP1RO75146 1068 aa10.07□□□□□ -0.8
DDB1-211ENST00000538280 SYF2O95926 243 aaKnown RBP10.07□□□□□ -0.8
DDB1-211ENST00000538280 FDX1P10109 184 aa10.07□□□□□ -0.8
DDB1-211ENST00000538280 RFX1P22670 979 aa10.07□□□□□ -0.8
DDB1-211ENST00000538280 STAT1P42224 750 aa10.07□□□□□ -0.8
DDB1-211ENST00000538280 NPEPPSP55786 919 aa10.07□□□□□ -0.8
DDB1-211ENST00000538280 SNRPFP62306 86 aaKnown RBP10.07□□□□□ -0.8
DDB1-211ENST00000538280 MRPS9P82933 396 aaKnown RBP10.07□□□□□ -0.8
DDB1-211ENST00000538280 RASA3Q14644 834 aa10.07□□□□□ -0.8
DDB1-211ENST00000538280 COG2Q14746 738 aa10.07□□□□□ -0.8
DDB1-211ENST00000538280 IFI16Q16666 785 aaKnown RBP10.07□□□□□ -0.8
DDB1-211ENST00000538280 KIAA0753Q2KHM9 967 aa10.07□□□□□ -0.8
DDB1-211ENST00000538280 CFAP221Q4G0U5 840 aa10.07□□□□□ -0.8
DDB1-211ENST00000538280 HS2ST1Q7LGA3 356 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms