RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 A8MXQ7 604 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 TDP2O95551 362 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 FGGP02679 453 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 PAMP19021 973 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 CYP2B6P20813 491 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 OCRLQ01968 901 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 IFT88Q13099 833 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 ZCWPW1Q9H0M4 648 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 FBXO40Q9UH90 709 aa11.98□□□□□ -0.49
LINC00346-201ENST00000538077 A0A1B0GUA9 196 aa11.97□□□□□ -0.49
LINC00346-201ENST00000538077 CDC27P30260 824 aa11.97□□□□□ -0.49
LINC00346-201ENST00000538077 RESP18Q5W5W9 173 aa11.97□□□□□ -0.49
LINC00346-201ENST00000538077 CLEC10AQ8IUN9 316 aa11.97□□□□□ -0.49
LINC00346-201ENST00000538077 PBXIP1Q96AQ6 731 aa11.97□□□□□ -0.49
LINC00346-201ENST00000538077 ATXN7L3BQ96GX2 97 aa11.97□□□□□ -0.49
LINC00346-201ENST00000538077 ADAMTS1Q9UHI8 967 aa11.97□□□□□ -0.49
LINC00346-201ENST00000538077 E5RI56 91 aa11.97□□□□□ -0.49
LINC00346-201ENST00000538077 F5H6K3 240 aa11.97□□□□□ -0.49
LINC00346-201ENST00000538077 GNA15P30679 374 aa11.97□□□□□ -0.49
LINC00346-201ENST00000538077 KLRC3Q07444 240 aa11.97□□□□□ -0.49
LINC00346-201ENST00000538077 CAPRIN1Q14444 709 aaKnown RBP11.97□□□□□ -0.49
LINC00346-201ENST00000538077 QRICH1Q2TAL8 776 aa11.97□□□□□ -0.49
LINC00346-201ENST00000538077 SLC10A5Q5PT55 438 aa11.97□□□□□ -0.49
LINC00346-201ENST00000538077 ACBD5Q5T8D3 534 aaPredicted RBP11.97□□□□□ -0.49
LINC00346-201ENST00000538077 PHLDB3Q6NSJ2 640 aa11.97□□□□□ -0.49
LINC00346-201ENST00000538077 LRRC31Q6UY01 552 aa11.97□□□□□ -0.49
LINC00346-201ENST00000538077 SIRT2Q8IXJ6 389 aa11.97□□□□□ -0.49
LINC00346-201ENST00000538077 NUP85Q9BW27 656 aa11.97□□□□□ -0.49
LINC00346-201ENST00000538077 GOLPH3LQ9H4A5 285 aa11.97□□□□□ -0.49
LINC00346-201ENST00000538077 GTSE1Q9NYZ3 720 aa11.97□□□□□ -0.49
LINC00346-201ENST00000538077 ATP1A3P13637 1013 aa11.97□□□□□ -0.49
LINC00346-201ENST00000538077 ZNF211Q13398 564 aaPredicted RBP11.97□□□□□ -0.49
LINC00346-201ENST00000538077 ZSCAN26Q16670 478 aa11.97□□□□□ -0.49
LINC00346-201ENST00000538077 SH3KBP1Q96B97 665 aa11.97□□□□□ -0.49
LINC00346-201ENST00000538077 EIF2AK1Q9BQI3 630 aaKnown RBP11.97□□□□□ -0.49
LINC00346-201ENST00000538077 LY9Q9HBG7 655 aa11.97□□□□□ -0.49
LINC00346-201ENST00000538077 KBTBD13C9JR72 458 aa11.97□□□□□ -0.49
LINC00346-201ENST00000538077 TXNP10599 105 aaKnown RBP11.97□□□□□ -0.49
LINC00346-201ENST00000538077 TOB2Q14106 344 aaPredicted RBP11.97□□□□□ -0.49
LINC00346-201ENST00000538077 SFMBT1Q9UHJ3 866 aa11.97□□□□□ -0.49
LINC00346-201ENST00000538077 NOVA2Q9UNW9 492 aaKnown RBP11.97□□□□□ -0.49
LINC00346-201ENST00000538077 MGEA5O60502 916 aa11.97□□□□□ -0.49
LINC00346-201ENST00000538077 SYF2O95926 243 aaKnown RBP11.97□□□□□ -0.49
LINC00346-201ENST00000538077 VAMP7P51809 220 aa11.97□□□□□ -0.49
LINC00346-201ENST00000538077 TAF1CQ15572 869 aaPredicted RBP11.97□□□□□ -0.49
LINC00346-201ENST00000538077 HIPK4Q8NE63 616 aa11.97□□□□□ -0.49
LINC00346-201ENST00000538077 TTC17Q96AE7 1141 aa11.97□□□□□ -0.49
LINC00346-201ENST00000538077 NDFIP2Q9NV92 336 aa11.97□□□□□ -0.49
LINC00346-201ENST00000538077 UBA6A0AVT1 1052 aaPredicted RBP11.96□□□□□ -0.49
LINC00346-201ENST00000538077 TJP3O95049 919 aa11.96□□□□□ -0.49
LINC00346-201ENST00000538077 HSPA4LO95757 839 aa11.96□□□□□ -0.49
LINC00346-201ENST00000538077 RWDD2BP57060 319 aa11.96□□□□□ -0.49
LINC00346-201ENST00000538077 ALCAMQ13740 583 aa11.96□□□□□ -0.49
LINC00346-201ENST00000538077 PGBD3Q8N328 593 aa11.96□□□□□ -0.49
LINC00346-201ENST00000538077 PBKQ96KB5 322 aa11.96□□□□□ -0.49
LINC00346-201ENST00000538077 ASNSD1Q9NWL6 643 aa11.96□□□□□ -0.49
LINC00346-201ENST00000538077 HIP1RO75146 1068 aa11.96□□□□□ -0.49
LINC00346-201ENST00000538077 POU5F1BQ06416 359 aa11.96□□□□□ -0.49
LINC00346-201ENST00000538077 IMPG1Q17R60 797 aa11.96□□□□□ -0.49
LINC00346-201ENST00000538077 ANGEL2Q5VTE6 544 aaKnown RBP11.96□□□□□ -0.49
LINC00346-201ENST00000538077 ANKRD40Q6AI12 368 aa11.96□□□□□ -0.49
LINC00346-201ENST00000538077 SMAP1Q8IYB5 467 aaPredicted RBP11.96□□□□□ -0.49
LINC00346-201ENST00000538077 PPP1R36Q96LQ0 422 aa11.96□□□□□ -0.49
LINC00346-201ENST00000538077 HACL1Q9UJ83 578 aa11.96□□□□□ -0.49
LINC00346-201ENST00000538077 CDC23Q9UJX2 597 aa11.96□□□□□ -0.49
LINC00346-201ENST00000538077 JRKLQ9Y4A0 524 aa11.96□□□□□ -0.49
LINC00346-201ENST00000538077 OVOS2A0A0G2JMS6 1433 aa11.96□□□□□ -0.49
LINC00346-201ENST00000538077 OVOS2A0A0J9YW53 1432 aa11.96□□□□□ -0.49
LINC00346-201ENST00000538077 OVOS2Q6IE36 1432 aa11.96□□□□□ -0.49
LINC00346-201ENST00000538077 VGLL3A8MV65 326 aa11.96□□□□□ -0.49
LINC00346-201ENST00000538077 NCK2O43639 380 aa11.96□□□□□ -0.49
LINC00346-201ENST00000538077 NDUFA10O95299 355 aa11.96□□□□□ -0.49
LINC00346-201ENST00000538077 RPSAP08865 295 aaKnown RBP11.96□□□□□ -0.49
LINC00346-201ENST00000538077 VCPP55072 806 aaKnown RBP11.96□□□□□ -0.49
LINC00346-201ENST00000538077 LBRQ14739 615 aaKnown RBP11.96□□□□□ -0.49
LINC00346-201ENST00000538077 PODNQ7Z5L7 613 aa11.96□□□□□ -0.49
LINC00346-201ENST00000538077 TMEM143Q96AN5 459 aa11.96□□□□□ -0.49
LINC00346-201ENST00000538077 ASIC4Q96FT7 647 aa11.96□□□□□ -0.49
LINC00346-201ENST00000538077 MRPL4Q9BYD3 311 aaKnown RBP11.96□□□□□ -0.49
LINC00346-201ENST00000538077 INTS2Q9H0H0 1204 aaKnown RBP11.96□□□□□ -0.49
LINC00346-201ENST00000538077 ANP32DO95626 131 aa11.96□□□□□ -0.5
LINC00346-201ENST00000538077 NNMTP40261 264 aa11.96□□□□□ -0.5
LINC00346-201ENST00000538077 ETF1P62495 437 aaKnown RBP11.96□□□□□ -0.5
LINC00346-201ENST00000538077 GRM4Q14833 912 aa11.96□□□□□ -0.5
LINC00346-201ENST00000538077 ZMYND12Q9H0C1 365 aa11.96□□□□□ -0.5
LINC00346-201ENST00000538077 SCINQ9Y6U3 715 aa11.96□□□□□ -0.5
LINC00346-201ENST00000538077 HNRNPCL2B2RXH8 293 aa11.96□□□□□ -0.5
LINC00346-201ENST00000538077 HNRNPCL1O60812 293 aaKnown RBP11.96□□□□□ -0.5
LINC00346-201ENST00000538077 SUN1O94901 812 aa11.96□□□□□ -0.5
LINC00346-201ENST00000538077 GSPT2Q8IYD1 628 aaKnown RBP11.96□□□□□ -0.5
LINC00346-201ENST00000538077 ZNF507Q8TCN5 953 aa11.96□□□□□ -0.5
LINC00346-201ENST00000538077 KLC2Q9H0B6 622 aa11.96□□□□□ -0.5
LINC00346-201ENST00000538077 Q9H521 79 aa11.96□□□□□ -0.5
LINC00346-201ENST00000538077 TBC1D22BQ9NU19 505 aa11.96□□□□□ -0.5
LINC00346-201ENST00000538077 EPS15L1Q9UBC2 864 aa11.96□□□□□ -0.5
LINC00346-201ENST00000538077 SLC9A2Q9UBY0 812 aa11.96□□□□□ -0.5
LINC00346-201ENST00000538077 CDK12Q9NYV4 1490 aaPredicted RBP11.95□□□□□ -0.5
LINC00346-201ENST00000538077 LRRC53A6NM62 1247 aa11.95□□□□□ -0.5
LINC00346-201ENST00000538077 PPARGP37231 505 aaPredicted RBP11.95□□□□□ -0.5
LINC00346-201ENST00000538077 PRCPP42785 496 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms