RNA–Protein interactions for RNA: ENST00000537724.1

AC055720.2-201, humanhuman

TSL 3 BASIC

Gene AC055720.2, Length 172 nt, Biotype 3prime overlapping ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.2-201ENST00000537724 MBD4O95243 580 aa5.08□□□□□ -1.6
AC055720.2-201ENST00000537724 PF4V1P10720 104 aa5.08□□□□□ -1.6
AC055720.2-201ENST00000537724 IDEP14735 1019 aa5.08□□□□□ -1.6
AC055720.2-201ENST00000537724 KRTAP10-2P60368 255 aa5.08□□□□□ -1.6
AC055720.2-201ENST00000537724 HTRA3P83110 453 aa5.08□□□□□ -1.6
AC055720.2-201ENST00000537724 MPP1Q00013 466 aa5.08□□□□□ -1.6
AC055720.2-201ENST00000537724 AMPD2Q01433 879 aa5.08□□□□□ -1.6
AC055720.2-201ENST00000537724 SLC10A6Q3KNW5 377 aa5.08□□□□□ -1.6
AC055720.2-201ENST00000537724 TUBB8Q3ZCM7 444 aa5.08□□□□□ -1.6
AC055720.2-201ENST00000537724 ARHGAP29Q52LW3 1261 aa5.08□□□□□ -1.6
AC055720.2-201ENST00000537724 RETSATQ6NUM9 610 aa5.08□□□□□ -1.6
AC055720.2-201ENST00000537724 FAM180BQ6P0A1 224 aa5.08□□□□□ -1.6
AC055720.2-201ENST00000537724 C6orf15Q6UXA7 325 aaPredicted RBP5.08□□□□□ -1.6
AC055720.2-201ENST00000537724 LIPIQ6XZB0 460 aa5.08□□□□□ -1.6
AC055720.2-201ENST00000537724 TBC1D1Q86TI0 1168 aaPredicted RBP5.08□□□□□ -1.6
AC055720.2-201ENST00000537724 CABP7Q86V35 215 aa5.08□□□□□ -1.6
AC055720.2-201ENST00000537724 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.08□□□□□ -1.6
AC055720.2-201ENST00000537724 FAM26EQ8N5C1 309 aa5.08□□□□□ -1.6
AC055720.2-201ENST00000537724 LZTR1Q8N653 840 aa5.08□□□□□ -1.6
AC055720.2-201ENST00000537724 ACRBPQ8NEB7 543 aa5.08□□□□□ -1.6
AC055720.2-201ENST00000537724 CCT6BQ92526 530 aa5.08□□□□□ -1.6
AC055720.2-201ENST00000537724 EIF2AK1Q9BQI3 630 aaKnown RBP5.08□□□□□ -1.6
AC055720.2-201ENST00000537724 SPATA25Q9BR10 227 aa5.08□□□□□ -1.6
AC055720.2-201ENST00000537724 PRKRIP1Q9H875 184 aaPredicted RBP5.08□□□□□ -1.6
AC055720.2-201ENST00000537724 ATP6V0A4Q9HBG4 840 aa5.08□□□□□ -1.6
AC055720.2-201ENST00000537724 ANLNQ9NQW6 1124 aa5.08□□□□□ -1.6
AC055720.2-201ENST00000537724 C1orf112Q9NSG2 853 aa5.08□□□□□ -1.6
AC055720.2-201ENST00000537724 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.08□□□□□ -1.6
AC055720.2-201ENST00000537724 GULP1Q9UBP9 304 aa5.08□□□□□ -1.6
AC055720.2-201ENST00000537724 DDX20Q9UHI6 824 aaKnown RBP5.08□□□□□ -1.6
AC055720.2-201ENST00000537724 ZBTB21Q9ULJ3 1066 aa5.08□□□□□ -1.6
AC055720.2-201ENST00000537724 BACE2Q9Y5Z0 518 aa5.08□□□□□ -1.6
AC055720.2-201ENST00000537724 hCG_1642624A0A1W2PR95 340 aa5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 B2RBV5 119 aa5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 PRICKLE3O43900 615 aaPredicted RBP5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 DDX58O95786 925 aaKnown RBP5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 BAG2O95816 211 aa5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 IFIT1P09914 478 aaKnown RBP5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 KCNA2P16389 499 aa5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 BPIP17213 487 aa5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 VCAM1P19320 739 aa5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 HOXD12P35452 270 aa5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 MAPK9P45984 424 aa5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 RECQLP46063 649 aaPredicted RBP5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 ZNF132P52740 706 aa5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 KRT85P78386 507 aa5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 DLX2Q07687 328 aaPredicted RBP5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 PTPN21Q16825 1174 aa5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 INAVAQ3KP66 663 aa5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 TTC31Q49AM3 519 aaPredicted RBP5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 ATP13A4Q4VNC1 1196 aa5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 VPS53Q5VIR6 699 aa5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 FAAH2Q6GMR7 532 aa5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 TLDC1Q6P9B6 456 aa5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 SLC41A1Q8IVJ1 513 aa5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 CBARPQ8N350 705 aaPredicted RBP5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 ARHGEF39Q8N4T4 335 aa5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 ZNF713Q8N859 430 aaPredicted RBP5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 PARD3BQ8TEW8 1205 aa5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 TSPAN17Q96FV3 270 aa5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 RSRC1Q96IZ7 334 aaKnown RBP5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 EXOC2Q96KP1 924 aa5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 SGCZQ96LD1 299 aa5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 SPAG5Q96R06 1193 aa5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 IWS1Q96ST2 819 aa5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 MAP3K14Q99558 947 aa5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 TTC1Q99614 292 aa5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 MRPL9Q9BYD2 267 aaKnown RBP5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 HDAC5Q9UQL6 1122 aa5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 JAG2Q9Y219 1238 aa5.07□□□□□ -1.6
AC055720.2-201ENST00000537724 NPHP3-ACAD11A0A0J9YXS1 232 aa5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 MAFKO60675 156 aa5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 SNUPNO95149 360 aaKnown RBP5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 LTFP02788 710 aa5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 TPM2P07951 284 aa5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 RHCEP18577 417 aa5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 PAMP19021 973 aa5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 GALNSP34059 522 aa5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 USP14P54578 494 aa5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 RHDQ02161 417 aa5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 BTKQ06187 659 aa5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 PPFIA1Q13136 1202 aa5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 GRB10Q13322 594 aa5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 SMC1AQ14683 1233 aaKnown RBP5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 RTP5Q14D33 572 aa5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 DNAJC21Q5F1R6 531 aaKnown RBP5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 NT5DC1Q5TFE4 455 aa5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 AGAP9Q5VTM2 703 aa5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 FOXB2Q5VYV0 432 aa5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 LMBRD2Q68DH5 695 aaPredicted RBP5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 KIAA1211LQ6NV74 962 aa5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 HIBCHQ6NVY1 386 aaPredicted RBP5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 PKN3Q6P5Z2 889 aa5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 CPLX2Q6PUV4 134 aaKnown RBP5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 C4orf50Q6ZRC1 276 aa5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 FASTKD5Q7L8L6 764 aaKnown RBP5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 B3GNT8Q7Z7M8 397 aa5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 HVCN1Q96D96 273 aa5.06□□□□□ -1.6
AC055720.2-201ENST00000537724 DDX11Q96FC9 970 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms