RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 SFR1Q86XK3 245 aa26.8■■□□□ 1.88
HMGA2-208ENST00000537429 FIZ1Q96SL8 496 aa26.8■■□□□ 1.88
HMGA2-208ENST00000537429 OLFML3Q9NRN5 406 aa26.8■■□□□ 1.88
HMGA2-208ENST00000537429 NPTX2P47972 431 aa26.79■■□□□ 1.88
HMGA2-208ENST00000537429 CDC42EP1Q00587 391 aa26.79■■□□□ 1.88
HMGA2-208ENST00000537429 FAAP100Q0VG06 881 aa26.79■■□□□ 1.88
HMGA2-208ENST00000537429 DMP1Q13316 513 aaPredicted RBP26.79■■□□□ 1.88
HMGA2-208ENST00000537429 PPP2R5AQ15172 486 aa26.79■■□□□ 1.88
HMGA2-208ENST00000537429 RSPH3Q86UC2 560 aa26.79■■□□□ 1.88
HMGA2-208ENST00000537429 SPIRE2Q8WWL2 714 aa26.79■■□□□ 1.88
HMGA2-208ENST00000537429 CCDC47Q96A33 483 aaKnown RBP26.79■■□□□ 1.88
HMGA2-208ENST00000537429 EXOC1Q9NV70 894 aa26.79■■□□□ 1.88
HMGA2-208ENST00000537429 KCNG1Q9UIX4 513 aa26.79■■□□□ 1.88
HMGA2-208ENST00000537429 GPC3P51654 580 aa26.78■■□□□ 1.88
HMGA2-208ENST00000537429 NLRP11P59045 1033 aaKnown RBP26.78■■□□□ 1.88
HMGA2-208ENST00000537429 ZNF710Q8N1W2 664 aa26.78■■□□□ 1.88
HMGA2-208ENST00000537429 RMND1Q9NWS8 449 aa26.78■■□□□ 1.88
HMGA2-208ENST00000537429 MAN1B1Q9UKM7 699 aa26.78■■□□□ 1.88
HMGA2-208ENST00000537429 GPR32O75388 356 aa26.77■■□□□ 1.88
HMGA2-208ENST00000537429 SRGAP2CP0DJJ0 459 aa26.77■■□□□ 1.88
HMGA2-208ENST00000537429 POU5F1BQ06416 359 aa26.77■■□□□ 1.88
HMGA2-208ENST00000537429 TMEM62Q0P6H9 643 aa26.77■■□□□ 1.88
HMGA2-208ENST00000537429 PSMD2Q13200 908 aa26.77■■□□□ 1.88
HMGA2-208ENST00000537429 FAM178BQ8IXR5 827 aa26.77■■□□□ 1.88
HMGA2-208ENST00000537429 RNF149Q8NC42 400 aa26.77■■□□□ 1.88
HMGA2-208ENST00000537429 HPS3Q969F9 1004 aa26.77■■□□□ 1.88
HMGA2-208ENST00000537429 NLRP4Q96MN2 994 aa26.77■■□□□ 1.88
HMGA2-208ENST00000537429 ADAMTS10Q9H324 1103 aa26.77■■□□□ 1.88
HMGA2-208ENST00000537429 CAND2O75155 1236 aa26.76■■□□□ 1.87
HMGA2-208ENST00000537429 MAPTP10636 758 aaKnown RBP26.76■■□□□ 1.87
HMGA2-208ENST00000537429 NCKAP1LP55160 1127 aa26.76■■□□□ 1.87
HMGA2-208ENST00000537429 RBL2Q08999 1139 aa26.76■■□□□ 1.87
HMGA2-208ENST00000537429 TFDP1Q14186 410 aa26.76■■□□□ 1.87
HMGA2-208ENST00000537429 FAM26FQ5R3K3 315 aa26.76■■□□□ 1.87
HMGA2-208ENST00000537429 ZNF410Q86VK4 478 aa26.76■■□□□ 1.87
HMGA2-208ENST00000537429 KMT5AQ9NQR1 393 aa26.76■■□□□ 1.87
HMGA2-208ENST00000537429 TBC1D7Q9P0N9 293 aa26.76■■□□□ 1.87
HMGA2-208ENST00000537429 ADGRA3Q8IWK6 1321 aa26.76■■□□□ 1.87
HMGA2-208ENST00000537429 A0A087WZ62 844 aa26.75■■□□□ 1.87
HMGA2-208ENST00000537429 LRRIQ4A6NIV6 560 aa26.75■■□□□ 1.87
HMGA2-208ENST00000537429 CCDC169A6NNP5 214 aa26.75■■□□□ 1.87
HMGA2-208ENST00000537429 THPOP40225 353 aa26.75■■□□□ 1.87
HMGA2-208ENST00000537429 SMTNP53814 917 aa26.75■■□□□ 1.87
HMGA2-208ENST00000537429 MRPS6P82932 125 aaKnown RBP26.75■■□□□ 1.87
HMGA2-208ENST00000537429 KIZQ2M2Z5 673 aa26.75■■□□□ 1.87
HMGA2-208ENST00000537429 CAGE1Q8TC20 777 aa26.75■■□□□ 1.87
HMGA2-208ENST00000537429 ZNF668Q96K58 619 aaPredicted RBP26.75■■□□□ 1.87
HMGA2-208ENST00000537429 PPP1R16BQ96T49 567 aa26.75■■□□□ 1.87
HMGA2-208ENST00000537429 FDXACB1Q9BRP7 624 aaPredicted RBP26.75■■□□□ 1.87
HMGA2-208ENST00000537429 MRPL44Q9H9J2 332 aaKnown RBP26.75■■□□□ 1.87
HMGA2-208ENST00000537429 IFT122Q9HBG6 1241 aa26.75■■□□□ 1.87
HMGA2-208ENST00000537429 CKBP12277 381 aa26.75■■□□□ 1.87
HMGA2-208ENST00000537429 MGAT3Q09327 533 aa26.75■■□□□ 1.87
HMGA2-208ENST00000537429 STK4Q13043 487 aa26.75■■□□□ 1.87
HMGA2-208ENST00000537429 ZNF720Q7Z2F6 126 aa26.75■■□□□ 1.87
HMGA2-208ENST00000537429 TRIML1Q8N9V2 468 aa26.75■■□□□ 1.87
HMGA2-208ENST00000537429 KIFC3Q9BVG8 833 aa26.75■■□□□ 1.87
HMGA2-208ENST00000537429 NFKBIZQ9BYH8 718 aa26.75■■□□□ 1.87
HMGA2-208ENST00000537429 FGFBP2Q9BYJ0 223 aa26.75■■□□□ 1.87
HMGA2-208ENST00000537429 CDHR5Q9HBB8 845 aa26.75■■□□□ 1.87
HMGA2-208ENST00000537429 ARHGAP28Q9P2N2 729 aa26.75■■□□□ 1.87
HMGA2-208ENST00000537429 BIN1O00499 593 aa26.74■■□□□ 1.87
HMGA2-208ENST00000537429 SLC16A4O15374 487 aa26.74■■□□□ 1.87
HMGA2-208ENST00000537429 LETM1O95202 739 aaPredicted RBP26.74■■□□□ 1.87
HMGA2-208ENST00000537429 NMT1P30419 496 aaKnown RBP26.74■■□□□ 1.87
HMGA2-208ENST00000537429 PTENP60484 403 aa26.74■■□□□ 1.87
HMGA2-208ENST00000537429 MORC3Q14149 939 aa26.74■■□□□ 1.87
HMGA2-208ENST00000537429 FAM26DQ5JW98 314 aa26.74■■□□□ 1.87
HMGA2-208ENST00000537429 CDCA2Q69YH5 1023 aaPredicted RBP26.74■■□□□ 1.87
HMGA2-208ENST00000537429 ISM2Q6H9L7 571 aa26.74■■□□□ 1.87
HMGA2-208ENST00000537429 IFNLR1Q8IU57 520 aaPredicted RBP26.74■■□□□ 1.87
HMGA2-208ENST00000537429 SLC17A8Q8NDX2 589 aa26.74■■□□□ 1.87
HMGA2-208ENST00000537429 TMEM161BQ8NDZ6 487 aa26.74■■□□□ 1.87
HMGA2-208ENST00000537429 DEPTORQ8TB45 409 aa26.74■■□□□ 1.87
HMGA2-208ENST00000537429 NLRP7Q8WX94 980 aa26.74■■□□□ 1.87
HMGA2-208ENST00000537429 KCNN1Q92952 543 aa26.74■■□□□ 1.87
HMGA2-208ENST00000537429 SCLT1Q96NL6 688 aa26.74■■□□□ 1.87
HMGA2-208ENST00000537429 CELF4Q9BZC1 486 aaKnown RBP26.74■■□□□ 1.87
HMGA2-208ENST00000537429 ST6GALNAC4Q9H4F1 302 aa26.74■■□□□ 1.87
HMGA2-208ENST00000537429 SLC39A2Q9NP94 309 aa26.74■■□□□ 1.87
HMGA2-208ENST00000537429 CDY2AQ9Y6F7 541 aa26.74■■□□□ 1.87
HMGA2-208ENST00000537429 CHRNA1P02708 482 aa26.73■■□□□ 1.87
HMGA2-208ENST00000537429 BMP6P22004 513 aa26.73■■□□□ 1.87
HMGA2-208ENST00000537429 CASP5P51878 434 aa26.73■■□□□ 1.87
HMGA2-208ENST00000537429 CRYBB1P53674 252 aaPredicted RBP26.73■■□□□ 1.87
HMGA2-208ENST00000537429 BFSP2Q13515 415 aa26.73■■□□□ 1.87
HMGA2-208ENST00000537429 ZNF618Q5T7W0 954 aa26.73■■□□□ 1.87
HMGA2-208ENST00000537429 ZNF658Q5TYW1 1059 aaPredicted RBP26.73■■□□□ 1.87
HMGA2-208ENST00000537429 HAUS6Q7Z4H7 955 aa26.73■■□□□ 1.87
HMGA2-208ENST00000537429 CCDC155Q8N6L0 562 aa26.73■■□□□ 1.87
HMGA2-208ENST00000537429 KIAA0895Q8NCT3 520 aa26.73■■□□□ 1.87
HMGA2-208ENST00000537429 GLIS3Q8NEA6 775 aa26.73■■□□□ 1.87
HMGA2-208ENST00000537429 HTATIP2Q9BUP3 242 aa26.73■■□□□ 1.87
HMGA2-208ENST00000537429 STRA6Q9BX79 667 aa26.73■■□□□ 1.87
HMGA2-208ENST00000537429 TBX21Q9UL17 535 aa26.73■■□□□ 1.87
HMGA2-208ENST00000537429 GINS2Q9Y248 185 aa26.73■■□□□ 1.87
HMGA2-208ENST00000537429 TRPV2Q9Y5S1 764 aa26.73■■□□□ 1.87
HMGA2-208ENST00000537429 M0QZ92 97 aa26.72■■□□□ 1.87
HMGA2-208ENST00000537429 PITPNM1O00562 1244 aa26.72■■□□□ 1.87
HMGA2-208ENST00000537429 CLTBP09497 229 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms