RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 MRPL9Q9BYD2 267 aaKnown RBP11.04□□□□□ -0.64
CCDC170-202ENST00000537358 NIFKQ9BYG3 293 aaKnown RBP11.04□□□□□ -0.64
CCDC170-202ENST00000537358 ADAMTS10Q9H324 1103 aa11.04□□□□□ -0.64
CCDC170-202ENST00000537358 BRMS1Q9HCU9 246 aa11.04□□□□□ -0.64
CCDC170-202ENST00000537358 NGRNQ9NPE2 291 aaKnown RBP11.04□□□□□ -0.64
CCDC170-202ENST00000537358 LINC01565O15544 149 aa11.03□□□□□ -0.64
CCDC170-202ENST00000537358 TDP2O95551 362 aa11.03□□□□□ -0.64
CCDC170-202ENST00000537358 EYA4O95677 639 aa11.03□□□□□ -0.64
CCDC170-202ENST00000537358 IRS1P35568 1242 aa11.03□□□□□ -0.64
CCDC170-202ENST00000537358 TIE1P35590 1138 aa11.03□□□□□ -0.64
CCDC170-202ENST00000537358 PSEN1P49768 467 aa11.03□□□□□ -0.64
CCDC170-202ENST00000537358 PSMC5P62195 406 aa11.03□□□□□ -0.64
CCDC170-202ENST00000537358 COASYQ13057 564 aa11.03□□□□□ -0.64
CCDC170-202ENST00000537358 UGCGQ16739 394 aa11.03□□□□□ -0.64
CCDC170-202ENST00000537358 INF2Q27J81 1249 aa11.03□□□□□ -0.64
CCDC170-202ENST00000537358 TWF2Q6IBS0 349 aaKnown RBP11.03□□□□□ -0.64
CCDC170-202ENST00000537358 ADGRD2Q7Z7M1 963 aa11.03□□□□□ -0.64
CCDC170-202ENST00000537358 NEK8Q86SG6 692 aa11.03□□□□□ -0.64
CCDC170-202ENST00000537358 ZNF410Q86VK4 478 aa11.03□□□□□ -0.64
CCDC170-202ENST00000537358 ECHDC2Q86YB7 292 aa11.03□□□□□ -0.64
CCDC170-202ENST00000537358 TMEM87AQ8NBN3 555 aa11.03□□□□□ -0.64
CCDC170-202ENST00000537358 ETNPPLQ8TBG4 499 aa11.03□□□□□ -0.64
CCDC170-202ENST00000537358 SLC7A3Q8WY07 619 aa11.03□□□□□ -0.64
CCDC170-202ENST00000537358 MRPS27Q92552 414 aaKnown RBP11.03□□□□□ -0.64
CCDC170-202ENST00000537358 ZNF668Q96K58 619 aaPredicted RBP11.03□□□□□ -0.64
CCDC170-202ENST00000537358 FAM20AQ96MK3 541 aa11.03□□□□□ -0.64
CCDC170-202ENST00000537358 LARP6Q9BRS8 491 aaKnown RBP11.03□□□□□ -0.64
CCDC170-202ENST00000537358 CHST12Q9NRB3 414 aa11.03□□□□□ -0.64
CCDC170-202ENST00000537358 SPG21Q9NZD8 308 aa11.03□□□□□ -0.64
CCDC170-202ENST00000537358 STK36Q9NRP7 1315 aa11.03□□□□□ -0.64
CCDC170-202ENST00000537358 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.02□□□□□ -0.65
CCDC170-202ENST00000537358 A0A0U1RQF3 1178 aa11.02□□□□□ -0.65
CCDC170-202ENST00000537358 M0R2N6 131 aa11.02□□□□□ -0.65
CCDC170-202ENST00000537358 CCNT1O60563 726 aaKnown RBP11.02□□□□□ -0.65
CCDC170-202ENST00000537358 BAG4O95429 457 aaKnown RBP11.02□□□□□ -0.65
CCDC170-202ENST00000537358 QARSP47897 775 aaKnown RBP11.02□□□□□ -0.65
CCDC170-202ENST00000537358 ALDH7A1P49419 539 aaKnown RBP11.02□□□□□ -0.65
CCDC170-202ENST00000537358 ANAPC15P60006 121 aa11.02□□□□□ -0.65
CCDC170-202ENST00000537358 PLCB3Q01970 1234 aa11.02□□□□□ -0.65
CCDC170-202ENST00000537358 TARBP2Q15633 366 aaKnown RBP11.02□□□□□ -0.65
CCDC170-202ENST00000537358 PLPP4Q5VZY2 271 aa11.02□□□□□ -0.65
CCDC170-202ENST00000537358 PPP4R3AQ6IN85 833 aa11.02□□□□□ -0.65
CCDC170-202ENST00000537358 KCNT2Q6UVM3 1135 aa11.02□□□□□ -0.65
CCDC170-202ENST00000537358 TMC7Q7Z402 723 aa11.02□□□□□ -0.65
CCDC170-202ENST00000537358 RHPN2Q8IUC4 686 aa11.02□□□□□ -0.65
CCDC170-202ENST00000537358 SMRP1Q8NCR6 262 aa11.02□□□□□ -0.65
CCDC170-202ENST00000537358 GJA10Q969M2 543 aa11.02□□□□□ -0.65
CCDC170-202ENST00000537358 MSLNLQ96KJ4 702 aa11.02□□□□□ -0.65
CCDC170-202ENST00000537358 MBOAT7Q96N66 472 aa11.02□□□□□ -0.65
CCDC170-202ENST00000537358 CASD1Q96PB1 797 aa11.02□□□□□ -0.65
CCDC170-202ENST00000537358 TCF25Q9BQ70 676 aa11.02□□□□□ -0.65
CCDC170-202ENST00000537358 CWH43Q9H720 699 aa11.02□□□□□ -0.65
CCDC170-202ENST00000537358 C11orf16Q9NQ32 467 aa11.02□□□□□ -0.65
CCDC170-202ENST00000537358 SUCLA2Q9P2R7 463 aaPredicted RBP11.02□□□□□ -0.65
CCDC170-202ENST00000537358 KCNJ14Q9UNX9 436 aa11.02□□□□□ -0.65
CCDC170-202ENST00000537358 PPME1Q9Y570 386 aa11.02□□□□□ -0.65
CCDC170-202ENST00000537358 PER2O15055 1255 aa11.01□□□□□ -0.65
CCDC170-202ENST00000537358 TBX3O15119 743 aa11.01□□□□□ -0.65
CCDC170-202ENST00000537358 EDIL3O43854 480 aa11.01□□□□□ -0.65
CCDC170-202ENST00000537358 PFKFB2O60825 505 aa11.01□□□□□ -0.65
CCDC170-202ENST00000537358 MAFO75444 373 aaPredicted RBP11.01□□□□□ -0.65
CCDC170-202ENST00000537358 GABBR2O75899 941 aa11.01□□□□□ -0.65
CCDC170-202ENST00000537358 P4HBP07237 508 aaKnown RBP11.01□□□□□ -0.65
CCDC170-202ENST00000537358 CA8P35219 290 aa11.01□□□□□ -0.65
CCDC170-202ENST00000537358 RAB27AP51159 221 aa11.01□□□□□ -0.65
CCDC170-202ENST00000537358 POLGP54098 1239 aaPredicted RBP11.01□□□□□ -0.65
CCDC170-202ENST00000537358 SCRN1Q12765 414 aa11.01□□□□□ -0.65
CCDC170-202ENST00000537358 PPP2R5CQ13362 524 aa11.01□□□□□ -0.65
CCDC170-202ENST00000537358 SMC1AQ14683 1233 aaKnown RBP11.01□□□□□ -0.65
CCDC170-202ENST00000537358 DUSP6Q16828 381 aa11.01□□□□□ -0.65
CCDC170-202ENST00000537358 PIK3AP1Q6ZUJ8 805 aa11.01□□□□□ -0.65
CCDC170-202ENST00000537358 OTUD6AQ7L8S5 288 aa11.01□□□□□ -0.65
CCDC170-202ENST00000537358 CATSPER4Q7RTX7 472 aa11.01□□□□□ -0.65
CCDC170-202ENST00000537358 SLFN12Q8IYM2 578 aa11.01□□□□□ -0.65
CCDC170-202ENST00000537358 HELQQ8TDG4 1101 aa11.01□□□□□ -0.65
CCDC170-202ENST00000537358 TMEM169Q96HH4 297 aa11.01□□□□□ -0.65
CCDC170-202ENST00000537358 CEP170P1Q96L14 293 aa11.01□□□□□ -0.65
CCDC170-202ENST00000537358 NLRP4Q96MN2 994 aa11.01□□□□□ -0.65
CCDC170-202ENST00000537358 AIFM3Q96NN9 605 aa11.01□□□□□ -0.65
CCDC170-202ENST00000537358 PHF20Q9BVI0 1012 aa11.01□□□□□ -0.65
CCDC170-202ENST00000537358 CYP26B1Q9NR63 512 aa11.01□□□□□ -0.65
CCDC170-202ENST00000537358 CLEC1BQ9P126 229 aa11.01□□□□□ -0.65
CCDC170-202ENST00000537358 ORC3Q9UBD5 711 aaPredicted RBP11.01□□□□□ -0.65
CCDC170-202ENST00000537358 BARX2Q9UMQ3 279 aaPredicted RBP11.01□□□□□ -0.65
CCDC170-202ENST00000537358 PIN4Q9Y237 131 aaKnown RBP11.01□□□□□ -0.65
CCDC170-202ENST00000537358 A0A087WZ62 844 aa11□□□□□ -0.65
CCDC170-202ENST00000537358 IGKV6-21A0A0C4DH24 114 aa11□□□□□ -0.65
CCDC170-202ENST00000537358 STK25O00506 426 aa11□□□□□ -0.65
CCDC170-202ENST00000537358 FSCN2O14926 492 aa11□□□□□ -0.65
CCDC170-202ENST00000537358 GALR2O43603 387 aaPredicted RBP11□□□□□ -0.65
CCDC170-202ENST00000537358 SLC37A4O43826 429 aa11□□□□□ -0.65
CCDC170-202ENST00000537358 GAS2O43903 313 aaKnown RBP11□□□□□ -0.65
CCDC170-202ENST00000537358 CSDE1O75534 798 aaKnown RBP11□□□□□ -0.65
CCDC170-202ENST00000537358 HOXB8P17481 243 aaPredicted RBP11□□□□□ -0.65
CCDC170-202ENST00000537358 FGFR4P22455 802 aa11□□□□□ -0.65
CCDC170-202ENST00000537358 KRT2P35908 639 aa11□□□□□ -0.65
CCDC170-202ENST00000537358 ERVFC1P60507 584 aa11□□□□□ -0.65
CCDC170-202ENST00000537358 RNASELQ05823 741 aaKnown RBP11□□□□□ -0.65
CCDC170-202ENST00000537358 TRIM29Q14134 588 aa11□□□□□ -0.65
CCDC170-202ENST00000537358 GLB1LQ6UWU2 654 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms