RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 VN1R2Q8NFZ6 395 aa22.11■■□□□ 1.13
TNFRSF1B-204ENST00000536782 CEP89Q96ST8 783 aa22.11■■□□□ 1.13
TNFRSF1B-204ENST00000536782 NGRNQ9NPE2 291 aaKnown RBP22.11■■□□□ 1.13
TNFRSF1B-204ENST00000536782 CHST12Q9NRB3 414 aa22.11■■□□□ 1.13
TNFRSF1B-204ENST00000536782 SPG21Q9NZD8 308 aa22.11■■□□□ 1.13
TNFRSF1B-204ENST00000536782 LOC730098B7Z3J9 87 aa22.1■■□□□ 1.13
TNFRSF1B-204ENST00000536782 CDKL5O76039 1030 aa22.1■■□□□ 1.13
TNFRSF1B-204ENST00000536782 NEFLP07196 543 aa22.1■■□□□ 1.13
TNFRSF1B-204ENST00000536782 PBX3P40426 434 aa22.1■■□□□ 1.13
TNFRSF1B-204ENST00000536782 PSMC5P62195 406 aa22.1■■□□□ 1.13
TNFRSF1B-204ENST00000536782 TMEM184AQ6ZMB5 413 aa22.1■■□□□ 1.13
TNFRSF1B-204ENST00000536782 HELQQ8TDG4 1101 aa22.1■■□□□ 1.13
TNFRSF1B-204ENST00000536782 SH2D3AQ9BRG2 576 aa22.1■■□□□ 1.13
TNFRSF1B-204ENST00000536782 PHF7Q9BWX1 381 aaPredicted RBP22.1■■□□□ 1.13
TNFRSF1B-204ENST00000536782 MRPL9Q9BYD2 267 aaKnown RBP22.1■■□□□ 1.13
TNFRSF1B-204ENST00000536782 KCNJ14Q9UNX9 436 aa22.1■■□□□ 1.13
TNFRSF1B-204ENST00000536782 A0A087WZ62 844 aa22.09■■□□□ 1.13
TNFRSF1B-204ENST00000536782 MAFO75444 373 aaPredicted RBP22.09■■□□□ 1.13
TNFRSF1B-204ENST00000536782 SFPQP23246 707 aaKnown RBP eCLIP22.09■■□□□ 1.13
TNFRSF1B-204ENST00000536782 LETM2Q2VYF4 491 aa22.09■■□□□ 1.13
TNFRSF1B-204ENST00000536782 TMC7Q7Z402 723 aa22.09■■□□□ 1.13
TNFRSF1B-204ENST00000536782 ZNF410Q86VK4 478 aa22.09■■□□□ 1.13
TNFRSF1B-204ENST00000536782 RHPN2Q8IUC4 686 aa22.09■■□□□ 1.13
TNFRSF1B-204ENST00000536782 EDAQ92838 391 aa22.09■■□□□ 1.13
TNFRSF1B-204ENST00000536782 FDXACB1Q9BRP7 624 aaPredicted RBP22.09■■□□□ 1.13
TNFRSF1B-204ENST00000536782 INO80BQ9C086 356 aaPredicted RBP22.09■■□□□ 1.13
TNFRSF1B-204ENST00000536782 SUCLA2Q9P2R7 463 aaPredicted RBP22.09■■□□□ 1.13
TNFRSF1B-204ENST00000536782 CCDC194A0A1B0GVG4 234 aa22.08■■□□□ 1.13
TNFRSF1B-204ENST00000536782 HIDE1A8MVS5 230 aa22.08■■□□□ 1.13
TNFRSF1B-204ENST00000536782 SLC37A4O43826 429 aa22.08■■□□□ 1.13
TNFRSF1B-204ENST00000536782 ATF7P17544 494 aaPredicted RBP22.08■■□□□ 1.13
TNFRSF1B-204ENST00000536782 XBP1P17861 261 aa22.08■■□□□ 1.13
TNFRSF1B-204ENST00000536782 KCNC3Q14003 757 aa22.08■■□□□ 1.13
TNFRSF1B-204ENST00000536782 CBX2Q14781 532 aaPredicted RBP22.08■■□□□ 1.13
TNFRSF1B-204ENST00000536782 HFE2Q6ZVN8 426 aa22.08■■□□□ 1.13
TNFRSF1B-204ENST00000536782 ANO5Q75V66 913 aa22.08■■□□□ 1.13
TNFRSF1B-204ENST00000536782 SUSD6Q92537 303 aa22.08■■□□□ 1.13
TNFRSF1B-204ENST00000536782 JPH2Q9BR39 696 aaPredicted RBP22.08■■□□□ 1.13
TNFRSF1B-204ENST00000536782 PHF20Q9BVI0 1012 aa22.08■■□□□ 1.13
TNFRSF1B-204ENST00000536782 TRAIPQ9BWF2 469 aa22.08■■□□□ 1.13
TNFRSF1B-204ENST00000536782 SLKQ9H2G2 1235 aaPredicted RBP22.08■■□□□ 1.13
TNFRSF1B-204ENST00000536782 MYO10Q9HD67 2058 aa22.07■■□□□ 1.12
TNFRSF1B-204ENST00000536782 TECP42680 631 aa22.07■■□□□ 1.12
TNFRSF1B-204ENST00000536782 PHKA2P46019 1235 aa22.07■■□□□ 1.12
TNFRSF1B-204ENST00000536782 ALDH7A1P49419 539 aaKnown RBP22.07■■□□□ 1.12
TNFRSF1B-204ENST00000536782 SCRN1Q12765 414 aa22.07■■□□□ 1.12
TNFRSF1B-204ENST00000536782 PPP2R5CQ13362 524 aa22.07■■□□□ 1.12
TNFRSF1B-204ENST00000536782 TWF2Q6IBS0 349 aaKnown RBP22.07■■□□□ 1.12
TNFRSF1B-204ENST00000536782 ANKRD54Q6NXT1 300 aa22.07■■□□□ 1.12
TNFRSF1B-204ENST00000536782 NEK8Q86SG6 692 aa22.07■■□□□ 1.12
TNFRSF1B-204ENST00000536782 SLC39A11Q8N1S5 342 aa22.07■■□□□ 1.12
TNFRSF1B-204ENST00000536782 RSPH1Q8WYR4 309 aa22.07■■□□□ 1.12
TNFRSF1B-204ENST00000536782 RPGRIP1Q96KN7 1286 aa22.07■■□□□ 1.12
TNFRSF1B-204ENST00000536782 MFSD14AQ96MC6 490 aa22.07■■□□□ 1.12
TNFRSF1B-204ENST00000536782 FAM20AQ96MK3 541 aa22.07■■□□□ 1.12
TNFRSF1B-204ENST00000536782 EML1O00423 815 aa22.06■■□□□ 1.12
TNFRSF1B-204ENST00000536782 DKC1O60832 514 aaKnown RBP eCLIP22.06■■□□□ 1.12
TNFRSF1B-204ENST00000536782 SKIP12755 728 aa22.06■■□□□ 1.12
TNFRSF1B-204ENST00000536782 GCFC2P16383 781 aaKnown RBP22.06■■□□□ 1.12
TNFRSF1B-204ENST00000536782 QARSP47897 775 aaKnown RBP22.06■■□□□ 1.12
TNFRSF1B-204ENST00000536782 SMC1AQ14683 1233 aaKnown RBP22.06■■□□□ 1.12
TNFRSF1B-204ENST00000536782 PLA2G4FQ68DD2 849 aa22.06■■□□□ 1.12
TNFRSF1B-204ENST00000536782 PPP4R3AQ6IN85 833 aa22.06■■□□□ 1.12
TNFRSF1B-204ENST00000536782 LLGL2Q6P1M3 1020 aa22.06■■□□□ 1.12
TNFRSF1B-204ENST00000536782 S1PR5Q9H228 398 aa22.06■■□□□ 1.12
TNFRSF1B-204ENST00000536782 KCNH6Q9H252 994 aa22.06■■□□□ 1.12
TNFRSF1B-204ENST00000536782 KCNMB3Q9NPA1 279 aa22.06■■□□□ 1.12
TNFRSF1B-204ENST00000536782 CYP26B1Q9NR63 512 aa22.06■■□□□ 1.12
TNFRSF1B-204ENST00000536782 VAV3Q9UKW4 847 aa22.06■■□□□ 1.12
TNFRSF1B-204ENST00000536782 PIN4Q9Y237 131 aaKnown RBP22.06■■□□□ 1.12
TNFRSF1B-204ENST00000536782 STK36Q9NRP7 1315 aa22.06■■□□□ 1.12
TNFRSF1B-204ENST00000536782 CENPBP07199 599 aaPredicted RBP22.05■■□□□ 1.12
TNFRSF1B-204ENST00000536782 BCAR1P56945 870 aa22.05■■□□□ 1.12
TNFRSF1B-204ENST00000536782 CATSPER4Q7RTX7 472 aa22.05■■□□□ 1.12
TNFRSF1B-204ENST00000536782 KSR1Q8IVT5 923 aa22.05■■□□□ 1.12
TNFRSF1B-204ENST00000536782 SLC7A3Q8WY07 619 aa22.05■■□□□ 1.12
TNFRSF1B-204ENST00000536782 NLRP4Q96MN2 994 aa22.05■■□□□ 1.12
TNFRSF1B-204ENST00000536782 NAP1L4Q99733 375 aaKnown RBP22.05■■□□□ 1.12
TNFRSF1B-204ENST00000536782 CACNA1HO95180 2353 aa22.04■■□□□ 1.12
TNFRSF1B-204ENST00000536782 CCNT1O60563 726 aaKnown RBP22.04■■□□□ 1.12
TNFRSF1B-204ENST00000536782 P4HBP07237 508 aaKnown RBP22.04■■□□□ 1.12
TNFRSF1B-204ENST00000536782 HOXB8P17481 243 aaPredicted RBP22.04■■□□□ 1.12
TNFRSF1B-204ENST00000536782 RAB27AP51159 221 aa22.04■■□□□ 1.12
TNFRSF1B-204ENST00000536782 BMS1Q14692 1282 aaKnown RBP22.04■■□□□ 1.12
TNFRSF1B-204ENST00000536782 SYCE2Q6PIF2 218 aa22.04■■□□□ 1.12
TNFRSF1B-204ENST00000536782 TRIM67Q6ZTA4 783 aa22.04■■□□□ 1.12
TNFRSF1B-204ENST00000536782 PIK3AP1Q6ZUJ8 805 aa22.04■■□□□ 1.12
TNFRSF1B-204ENST00000536782 EXOC8Q8IYI6 725 aa22.04■■□□□ 1.12
TNFRSF1B-204ENST00000536782 MRPL43Q8N983 215 aaKnown RBP22.04■■□□□ 1.12
TNFRSF1B-204ENST00000536782 CASP10Q92851 521 aa22.04■■□□□ 1.12
TNFRSF1B-204ENST00000536782 TMEM169Q96HH4 297 aa22.04■■□□□ 1.12
TNFRSF1B-204ENST00000536782 FAM105AQ9NUU6 356 aa22.04■■□□□ 1.12
TNFRSF1B-204ENST00000536782 KMT2EQ8IZD2 1858 aa22.04■■□□□ 1.12
TNFRSF1B-204ENST00000536782 CARNS1A5YM72 827 aa22.03■■□□□ 1.12
TNFRSF1B-204ENST00000536782 C2orf71A6NGG8 1288 aa22.03■■□□□ 1.12
TNFRSF1B-204ENST00000536782 NT5C1B-RDH14C9J2C7 533 aa22.03■■□□□ 1.12
TNFRSF1B-204ENST00000536782 TBX3O15119 743 aa22.03■■□□□ 1.12
TNFRSF1B-204ENST00000536782 MARCH6O60337 910 aa22.03■■□□□ 1.12
TNFRSF1B-204ENST00000536782 PFKFB2O60825 505 aa22.03■■□□□ 1.12
TNFRSF1B-204ENST00000536782 NPEPPSP55786 919 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms