RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 EXOC8Q8IYI6 725 aa19.94■□□□□ 0.78
TNFRSF1A-209ENST00000536717 TMEM143Q96AN5 459 aa19.94■□□□□ 0.78
TNFRSF1A-209ENST00000536717 ELAC1Q9H777 363 aaKnown RBP19.94■□□□□ 0.78
TNFRSF1A-209ENST00000536717 IFT122Q9HBG6 1241 aa19.94■□□□□ 0.78
TNFRSF1A-209ENST00000536717 TMEM161AQ9NX61 479 aa19.94■□□□□ 0.78
TNFRSF1A-209ENST00000536717 COL4A3BPQ9Y5P4 624 aa19.94■□□□□ 0.78
TNFRSF1A-209ENST00000536717 OR52Z1P0C646 297 aa19.93■□□□□ 0.78
TNFRSF1A-209ENST00000536717 NBR1Q14596 966 aa19.93■□□□□ 0.78
TNFRSF1A-209ENST00000536717 EMC2Q15006 297 aa19.93■□□□□ 0.78
TNFRSF1A-209ENST00000536717 NLRP4Q96MN2 994 aa19.93■□□□□ 0.78
TNFRSF1A-209ENST00000536717 ASB2Q96Q27 587 aa19.93■□□□□ 0.78
TNFRSF1A-209ENST00000536717 C11orf84Q9BUA3 381 aaPredicted RBP19.93■□□□□ 0.78
TNFRSF1A-209ENST00000536717 XPNPEP1Q9NQW7 623 aa19.93■□□□□ 0.78
TNFRSF1A-209ENST00000536717 RNF216Q9NWF9 866 aaPredicted RBP19.93■□□□□ 0.78
TNFRSF1A-209ENST00000536717 SPATA31C1P0DKV0 1188 aa19.92■□□□□ 0.78
TNFRSF1A-209ENST00000536717 TECP42680 631 aa19.92■□□□□ 0.78
TNFRSF1A-209ENST00000536717 TOB1P50616 345 aaPredicted RBP19.92■□□□□ 0.78
TNFRSF1A-209ENST00000536717 MRPS5P82675 430 aaKnown RBP19.92■□□□□ 0.78
TNFRSF1A-209ENST00000536717 PTPROQ16827 1216 aa19.92■□□□□ 0.78
TNFRSF1A-209ENST00000536717 C4orf32Q8N8J7 132 aa19.92■□□□□ 0.78
TNFRSF1A-209ENST00000536717 PRPF31Q8WWY3 499 aaKnown RBP19.92■□□□□ 0.78
TNFRSF1A-209ENST00000536717 PSPC1Q8WXF1 523 aaKnown RBP19.92■□□□□ 0.78
TNFRSF1A-209ENST00000536717 PLVAPQ9BX97 442 aa19.92■□□□□ 0.78
TNFRSF1A-209ENST00000536717 ATP6V0A4Q9HBG4 840 aa19.92■□□□□ 0.78
TNFRSF1A-209ENST00000536717 RNF19AQ9NV58 838 aa19.92■□□□□ 0.78
TNFRSF1A-209ENST00000536717 TBKBP1A7MCY6 615 aa19.92■□□□□ 0.78
TNFRSF1A-209ENST00000536717 GRM6O15303 877 aa19.92■□□□□ 0.78
TNFRSF1A-209ENST00000536717 GAS2O43903 313 aaKnown RBP19.92■□□□□ 0.78
TNFRSF1A-209ENST00000536717 FGFR1P11362 822 aa19.92■□□□□ 0.78
TNFRSF1A-209ENST00000536717 SFPQP23246 707 aaKnown RBP eCLIP19.92■□□□□ 0.78
TNFRSF1A-209ENST00000536717 ECHDC2Q86YB7 292 aa19.92■□□□□ 0.78
TNFRSF1A-209ENST00000536717 PIGOQ8TEQ8 1089 aa19.92■□□□□ 0.78
TNFRSF1A-209ENST00000536717 P2RX5Q93086 422 aa19.92■□□□□ 0.78
TNFRSF1A-209ENST00000536717 MTRQ99707 1265 aa19.92■□□□□ 0.78
TNFRSF1A-209ENST00000536717 INO80BQ9C086 356 aaPredicted RBP19.92■□□□□ 0.78
TNFRSF1A-209ENST00000536717 ANKEF1Q9NU02 776 aa19.92■□□□□ 0.78
TNFRSF1A-209ENST00000536717 HCSTQ9UBK5 93 aa19.92■□□□□ 0.78
TNFRSF1A-209ENST00000536717 NOL7Q9UMY1 257 aaKnown RBP19.92■□□□□ 0.78
TNFRSF1A-209ENST00000536717 COG5Q9UP83 839 aa19.92■□□□□ 0.78
TNFRSF1A-209ENST00000536717 A0A087WWV3 80 aa19.91■□□□□ 0.78
TNFRSF1A-209ENST00000536717 A0A0U1RQF3 1178 aa19.91■□□□□ 0.78
TNFRSF1A-209ENST00000536717 VPS37CA5D8V6 355 aaPredicted RBP19.91■□□□□ 0.78
TNFRSF1A-209ENST00000536717 MED24O75448 989 aa19.91■□□□□ 0.78
TNFRSF1A-209ENST00000536717 PDIA4P13667 645 aaKnown RBP19.91■□□□□ 0.78
TNFRSF1A-209ENST00000536717 SYT1P21579 422 aa19.91■□□□□ 0.78
TNFRSF1A-209ENST00000536717 RARRES1P49788 294 aa19.91■□□□□ 0.78
TNFRSF1A-209ENST00000536717 LAMTOR4Q0VGL1 99 aa19.91■□□□□ 0.78
TNFRSF1A-209ENST00000536717 FERMT3Q86UX7 667 aa19.91■□□□□ 0.78
TNFRSF1A-209ENST00000536717 CATSPER3Q86XQ3 398 aa19.91■□□□□ 0.78
TNFRSF1A-209ENST00000536717 TCP11Q8WWU5 503 aa19.91■□□□□ 0.78
TNFRSF1A-209ENST00000536717 PCDHB6Q9Y5E3 794 aa19.91■□□□□ 0.78
TNFRSF1A-209ENST00000536717 ATF7P17544 494 aaPredicted RBP19.9■□□□□ 0.78
TNFRSF1A-209ENST00000536717 TIGD5Q53EQ6 642 aa19.9■□□□□ 0.78
TNFRSF1A-209ENST00000536717 MCTP1Q6DN14 999 aa19.9■□□□□ 0.78
TNFRSF1A-209ENST00000536717 ZNF598Q86UK7 904 aaKnown RBP19.9■□□□□ 0.78
TNFRSF1A-209ENST00000536717 HLA-CQ95604 372 aa19.9■□□□□ 0.78
TNFRSF1A-209ENST00000536717 LMAN2LQ9H0V9 348 aa19.9■□□□□ 0.78
TNFRSF1A-209ENST00000536717 MINDY3Q9H8M7 445 aa19.9■□□□□ 0.78
TNFRSF1A-209ENST00000536717 TUFT1Q9NNX1 390 aa19.9■□□□□ 0.78
TNFRSF1A-209ENST00000536717 ALG13Q9NP73 1137 aaKnown RBP19.9■□□□□ 0.78
TNFRSF1A-209ENST00000536717 CHST12Q9NRB3 414 aa19.9■□□□□ 0.78
TNFRSF1A-209ENST00000536717 DACT1Q9NYF0 836 aa19.9■□□□□ 0.78
TNFRSF1A-209ENST00000536717 PLAGL2Q9UPG8 496 aa19.9■□□□□ 0.78
TNFRSF1A-209ENST00000536717 DGAT1O75907 488 aa19.89■□□□□ 0.77
TNFRSF1A-209ENST00000536717 ITGB1P05556 798 aa19.89■□□□□ 0.77
TNFRSF1A-209ENST00000536717 SRGAP2CP0DJJ0 459 aa19.89■□□□□ 0.77
TNFRSF1A-209ENST00000536717 XRCC6P12956 609 aaKnown RBP eCLIP19.89■□□□□ 0.77
TNFRSF1A-209ENST00000536717 CAMK1Q14012 370 aa19.89■□□□□ 0.77
TNFRSF1A-209ENST00000536717 CATSPER4Q7RTX7 472 aa19.89■□□□□ 0.77
TNFRSF1A-209ENST00000536717 KLHL23Q8NBE8 558 aa19.89■□□□□ 0.77
TNFRSF1A-209ENST00000536717 SYMPKQ92797 1274 aaKnown RBP19.89■□□□□ 0.77
TNFRSF1A-209ENST00000536717 CASD1Q96PB1 797 aa19.89■□□□□ 0.77
TNFRSF1A-209ENST00000536717 POLR3CQ9BUI4 534 aaPredicted RBP19.89■□□□□ 0.77
TNFRSF1A-209ENST00000536717 TRAIPQ9BWF2 469 aa19.89■□□□□ 0.77
TNFRSF1A-209ENST00000536717 TMEM117Q9H0C3 514 aa19.89■□□□□ 0.77
TNFRSF1A-209ENST00000536717 TYW1Q9NV66 732 aaKnown RBP19.89■□□□□ 0.77
TNFRSF1A-209ENST00000536717 ASAP2O43150 1006 aa19.88■□□□□ 0.77
TNFRSF1A-209ENST00000536717 STX6O43752 255 aa19.88■□□□□ 0.77
TNFRSF1A-209ENST00000536717 RPA1P27694 616 aa19.88■□□□□ 0.77
TNFRSF1A-209ENST00000536717 KCNQ1P51787 676 aa19.88■□□□□ 0.77
TNFRSF1A-209ENST00000536717 NAALADL2Q58DX5 795 aa19.88■□□□□ 0.77
TNFRSF1A-209ENST00000536717 TCEAL5Q5H9L2 206 aa19.88■□□□□ 0.77
TNFRSF1A-209ENST00000536717 CLLU1OSQ5K130 101 aa19.88■□□□□ 0.77
TNFRSF1A-209ENST00000536717 SRGAP1Q7Z6B7 1085 aa19.88■□□□□ 0.77
TNFRSF1A-209ENST00000536717 RNF149Q8NC42 400 aa19.88■□□□□ 0.77
TNFRSF1A-209ENST00000536717 SPPL3Q8TCT6 385 aa19.88■□□□□ 0.77
TNFRSF1A-209ENST00000536717 NSUN3Q9H649 340 aaKnown RBP19.88■□□□□ 0.77
TNFRSF1A-209ENST00000536717 CWH43Q9H720 699 aa19.88■□□□□ 0.77
TNFRSF1A-209ENST00000536717 PIN4Q9Y237 131 aaKnown RBP19.88■□□□□ 0.77
TNFRSF1A-209ENST00000536717 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.87■□□□□ 0.77
TNFRSF1A-209ENST00000536717 HOXA2O43364 376 aa19.87■□□□□ 0.77
TNFRSF1A-209ENST00000536717 EOMESO95936 686 aa19.87■□□□□ 0.77
TNFRSF1A-209ENST00000536717 BMP1P13497 986 aa19.87■□□□□ 0.77
TNFRSF1A-209ENST00000536717 DNAJB1P25685 340 aa19.87■□□□□ 0.77
TNFRSF1A-209ENST00000536717 PHKA2P46019 1235 aa19.87■□□□□ 0.77
TNFRSF1A-209ENST00000536717 FXR2P51116 673 aaKnown RBP eCLIP19.87■□□□□ 0.77
TNFRSF1A-209ENST00000536717 PTGDRQ13258 359 aa19.87■□□□□ 0.77
TNFRSF1A-209ENST00000536717 TWF2Q6IBS0 349 aaKnown RBP19.87■□□□□ 0.77
TNFRSF1A-209ENST00000536717 POTEGQ6S5H5 508 aa19.87■□□□□ 0.77
TNFRSF1A-209ENST00000536717 LRRC55Q6ZSA7 311 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms