RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 LOC105371045A0A1W2PR82 267 aa7.64□□□□□ -1.19
CLIP1-207ENST00000536634 MROH6A6NGR9 719 aa7.64□□□□□ -1.19
CLIP1-207ENST00000536634 DVL2O14641 736 aa7.64□□□□□ -1.19
CLIP1-207ENST00000536634 KLHL18O94889 574 aa7.64□□□□□ -1.19
CLIP1-207ENST00000536634 MPIG6BO95866 241 aa7.64□□□□□ -1.19
CLIP1-207ENST00000536634 CYP1A1P04798 512 aaPredicted RBP7.64□□□□□ -1.19
CLIP1-207ENST00000536634 PTGS1P23219 599 aa7.64□□□□□ -1.19
CLIP1-207ENST00000536634 FAM50AQ14320 339 aaKnown RBP7.64□□□□□ -1.19
CLIP1-207ENST00000536634 NFIXQ14938 502 aa7.64□□□□□ -1.19
CLIP1-207ENST00000536634 TMEM132BQ14DG7 1078 aa7.64□□□□□ -1.19
CLIP1-207ENST00000536634 GIMAP6Q6P9H5 292 aa7.64□□□□□ -1.19
CLIP1-207ENST00000536634 FERMT3Q86UX7 667 aa7.64□□□□□ -1.19
CLIP1-207ENST00000536634 DHX37Q8IY37 1157 aaKnown RBP7.64□□□□□ -1.19
CLIP1-207ENST00000536634 ASB15Q8WXK1 588 aa7.64□□□□□ -1.19
CLIP1-207ENST00000536634 NINJ1Q92982 152 aa7.64□□□□□ -1.19
CLIP1-207ENST00000536634 BOCQ9BWV1 1114 aa7.64□□□□□ -1.19
CLIP1-207ENST00000536634 TMEM168Q9H0V1 697 aa7.64□□□□□ -1.19
CLIP1-207ENST00000536634 FTSJ1Q9UET6 329 aa7.64□□□□□ -1.19
CLIP1-207ENST00000536634 NUP155O75694 1391 aa7.63□□□□□ -1.19
CLIP1-207ENST00000536634 NPHP3Q7Z494 1330 aa7.63□□□□□ -1.19
CLIP1-207ENST00000536634 CBX4O00257 560 aa7.63□□□□□ -1.19
CLIP1-207ENST00000536634 ENPP3O14638 875 aa7.63□□□□□ -1.19
CLIP1-207ENST00000536634 CNR2P34972 360 aa7.63□□□□□ -1.19
CLIP1-207ENST00000536634 CFAP100Q494V2 611 aa7.63□□□□□ -1.19
CLIP1-207ENST00000536634 CATSPEREQ5SY80 951 aa7.63□□□□□ -1.19
CLIP1-207ENST00000536634 KIAA0907Q7Z7F0 614 aaPredicted RBP7.63□□□□□ -1.19
CLIP1-207ENST00000536634 NIM1KQ8IY84 436 aa7.63□□□□□ -1.19
CLIP1-207ENST00000536634 LCORQ96JN0 433 aaPredicted RBP7.63□□□□□ -1.19
CLIP1-207ENST00000536634 TEPSINQ96N21 525 aa7.63□□□□□ -1.19
CLIP1-207ENST00000536634 FEZ1Q99689 392 aa7.63□□□□□ -1.19
CLIP1-207ENST00000536634 AMNQ9BXJ7 453 aa7.63□□□□□ -1.19
CLIP1-207ENST00000536634 INTS7Q9NVH2 962 aaKnown RBP7.63□□□□□ -1.19
CLIP1-207ENST00000536634 UCKL1Q9NWZ5 548 aa7.63□□□□□ -1.19
CLIP1-207ENST00000536634 ABCA3Q99758 1704 aa7.62□□□□□ -1.19
CLIP1-207ENST00000536634 TNS1Q9HBL0 1735 aaKnown RBP7.62□□□□□ -1.19
CLIP1-207ENST00000536634 NWD2Q9ULI1 1742 aa7.62□□□□□ -1.19
CLIP1-207ENST00000536634 PTPDC1A2A3K4 754 aa7.62□□□□□ -1.19
CLIP1-207ENST00000536634 C9orf118A6NHY6 69 aa7.62□□□□□ -1.19
CLIP1-207ENST00000536634 FOXP2O15409 715 aa7.62□□□□□ -1.19
CLIP1-207ENST00000536634 HIP1RO75146 1068 aa7.62□□□□□ -1.19
CLIP1-207ENST00000536634 CHGBP05060 677 aa7.62□□□□□ -1.19
CLIP1-207ENST00000536634 SDHAP31040 664 aa7.62□□□□□ -1.19
CLIP1-207ENST00000536634 R3HDM1Q15032 1099 aaKnown RBP7.62□□□□□ -1.19
CLIP1-207ENST00000536634 DALRD3Q5D0E6 543 aaKnown RBP7.62□□□□□ -1.19
CLIP1-207ENST00000536634 LRSAM1Q6UWE0 723 aa7.62□□□□□ -1.19
CLIP1-207ENST00000536634 UBE2R2Q712K3 238 aaPredicted RBP7.62□□□□□ -1.19
CLIP1-207ENST00000536634 KRT27Q7Z3Y8 459 aa7.62□□□□□ -1.19
CLIP1-207ENST00000536634 WNK4Q96J92 1243 aa7.62□□□□□ -1.19
CLIP1-207ENST00000536634 INCENPQ9NQS7 918 aa7.62□□□□□ -1.19
CLIP1-207ENST00000536634 HFM1A2PYH4 1435 aa7.61□□□□□ -1.19
CLIP1-207ENST00000536634 RGPD1P0DJD0 1748 aa7.61□□□□□ -1.19
CLIP1-207ENST00000536634 NRAPQ86VF7 1730 aa7.61□□□□□ -1.19
CLIP1-207ENST00000536634 B4GALT3O60512 393 aa7.61□□□□□ -1.19
CLIP1-207ENST00000536634 KPNA6O60684 536 aa7.61□□□□□ -1.19
CLIP1-207ENST00000536634 YY1P25490 414 aa7.61□□□□□ -1.19
CLIP1-207ENST00000536634 FLT3P36888 993 aa7.61□□□□□ -1.19
CLIP1-207ENST00000536634 IL13RA1P78552 427 aa7.61□□□□□ -1.19
CLIP1-207ENST00000536634 VPS72Q15906 364 aa7.61□□□□□ -1.19
CLIP1-207ENST00000536634 ARHGAP44Q17R89 818 aa7.61□□□□□ -1.19
CLIP1-207ENST00000536634 CNNM4Q6P4Q7 775 aa7.61□□□□□ -1.19
CLIP1-207ENST00000536634 LRRTM3Q86VH5 581 aa7.61□□□□□ -1.19
CLIP1-207ENST00000536634 GBP4Q96PP9 640 aa7.61□□□□□ -1.19
CLIP1-207ENST00000536634 MTFR1LQ9H019 292 aa7.61□□□□□ -1.19
CLIP1-207ENST00000536634 CABP5Q9NP86 173 aa7.61□□□□□ -1.19
CLIP1-207ENST00000536634 GALNT8Q9NY28 637 aa7.61□□□□□ -1.19
CLIP1-207ENST00000536634 B4GALT6Q9UBX8 382 aa7.61□□□□□ -1.19
CLIP1-207ENST00000536634 SPATA31A3Q5VYP0 1347 aa7.6□□□□□ -1.19
CLIP1-207ENST00000536634 KIF1BO60333 1816 aa7.6□□□□□ -1.19
CLIP1-207ENST00000536634 TLDC2A0PJX2 215 aa7.6□□□□□ -1.19
CLIP1-207ENST00000536634 PRAMEF22A3QJZ6 481 aa7.6□□□□□ -1.19
CLIP1-207ENST00000536634 H0Y858 1186 aa7.6□□□□□ -1.19
CLIP1-207ENST00000536634 IGSF3O75054 1194 aa7.6□□□□□ -1.19
CLIP1-207ENST00000536634 KIAA2012Q0VF49 1180 aa7.6□□□□□ -1.19
CLIP1-207ENST00000536634 NFATC3Q12968 1075 aa7.6□□□□□ -1.19
CLIP1-207ENST00000536634 SKOR2Q2VWA4 1001 aaPredicted RBP7.6□□□□□ -1.19
CLIP1-207ENST00000536634 ZFYVE27Q5T4F4 411 aa7.6□□□□□ -1.19
CLIP1-207ENST00000536634 CREB3L3Q68CJ9 461 aa7.6□□□□□ -1.19
CLIP1-207ENST00000536634 Q6ZUG5 572 aa7.6□□□□□ -1.19
CLIP1-207ENST00000536634 HIPK4Q8NE63 616 aa7.6□□□□□ -1.19
CLIP1-207ENST00000536634 RELTQ969Z4 430 aa7.6□□□□□ -1.19
CLIP1-207ENST00000536634 TARS2Q9BW92 718 aaKnown RBP7.6□□□□□ -1.19
CLIP1-207ENST00000536634 INVSQ9Y283 1065 aa7.6□□□□□ -1.19
CLIP1-207ENST00000536634 NAIPQ13075 1403 aa7.6□□□□□ -1.19
CLIP1-207ENST00000536634 ROCK1Q13464 1354 aa7.59□□□□□ -1.19
CLIP1-207ENST00000536634 FOXD2O60548 495 aaPredicted RBP7.59□□□□□ -1.19
CLIP1-207ENST00000536634 NEK4P51957 841 aa7.59□□□□□ -1.19
CLIP1-207ENST00000536634 KIF11P52732 1056 aa7.59□□□□□ -1.19
CLIP1-207ENST00000536634 PCBP1Q15365 356 aaKnown RBP eCLIP7.59□□□□□ -1.19
CLIP1-207ENST00000536634 UBXN11Q5T124 520 aa7.59□□□□□ -1.19
CLIP1-207ENST00000536634 CC2D1AQ6P1N0 951 aaPredicted RBP7.59□□□□□ -1.19
CLIP1-207ENST00000536634 FAM124AQ86V42 546 aa7.59□□□□□ -1.19
CLIP1-207ENST00000536634 KLHL36Q8N4N3 616 aa7.59□□□□□ -1.19
CLIP1-207ENST00000536634 CXorf38Q8TB03 319 aa7.59□□□□□ -1.19
CLIP1-207ENST00000536634 ERCC4Q92889 916 aaPredicted RBP7.59□□□□□ -1.19
CLIP1-207ENST00000536634 FOXRED1Q96CU9 486 aaPredicted RBP7.59□□□□□ -1.19
CLIP1-207ENST00000536634 DISP2A7MBM2 1401 aa7.59□□□□□ -1.19
CLIP1-207ENST00000536634 FMN2Q9NZ56 1722 aa7.58□□□□□ -1.2
CLIP1-207ENST00000536634 KIF1AQ12756 1690 aa7.58□□□□□ -1.2
CLIP1-207ENST00000536634 POU3F2P20265 443 aaPredicted RBP7.58□□□□□ -1.2
CLIP1-207ENST00000536634 ADCY8P40145 1251 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms