RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 MBTPS2O43462 519 aa14.71□□□□□ -0.05
RTN3-207ENST00000536011 DCXO43602 365 aa14.71□□□□□ -0.05
RTN3-207ENST00000536011 SLC37A4O43826 429 aa14.71□□□□□ -0.05
RTN3-207ENST00000536011 MAFO75444 373 aaPredicted RBP14.71□□□□□ -0.05
RTN3-207ENST00000536011 BAG4O95429 457 aaKnown RBP14.71□□□□□ -0.05
RTN3-207ENST00000536011 IRS1P35568 1242 aa14.71□□□□□ -0.05
RTN3-207ENST00000536011 PLCB3Q01970 1234 aa14.71□□□□□ -0.05
RTN3-207ENST00000536011 DLX2Q07687 328 aaPredicted RBP14.71□□□□□ -0.05
RTN3-207ENST00000536011 PIK3AP1Q6ZUJ8 805 aa14.71□□□□□ -0.05
RTN3-207ENST00000536011 SLFN12Q8IYM2 578 aa14.71□□□□□ -0.05
RTN3-207ENST00000536011 NGRNQ9NPE2 291 aaKnown RBP14.71□□□□□ -0.05
RTN3-207ENST00000536011 SUCLA2Q9P2R7 463 aaPredicted RBP14.71□□□□□ -0.05
RTN3-207ENST00000536011 VAV3Q9UKW4 847 aa14.71□□□□□ -0.05
RTN3-207ENST00000536011 ARIH1Q9Y4X5 557 aaPredicted RBP14.71□□□□□ -0.05
RTN3-207ENST00000536011 PLXNA4Q9HCM2 1894 aa14.7□□□□□ -0.06
RTN3-207ENST00000536011 C19orf67A6NJJ6 358 aa14.7□□□□□ -0.06
RTN3-207ENST00000536011 HAX1O00165 279 aa14.7□□□□□ -0.06
RTN3-207ENST00000536011 LINC01565O15544 149 aa14.7□□□□□ -0.06
RTN3-207ENST00000536011 GAS2O43903 313 aaKnown RBP14.7□□□□□ -0.06
RTN3-207ENST00000536011 EYA4O95677 639 aa14.7□□□□□ -0.06
RTN3-207ENST00000536011 P4HBP07237 508 aaKnown RBP14.7□□□□□ -0.06
RTN3-207ENST00000536011 GTF2F1P35269 517 aaKnown RBP eCLIP14.7□□□□□ -0.063e-7■■■■■ 29.2
RTN3-207ENST00000536011 KRT2P35908 639 aa14.7□□□□□ -0.06
RTN3-207ENST00000536011 RFC5P40937 340 aa14.7□□□□□ -0.06
RTN3-207ENST00000536011 RAB27AP51159 221 aa14.7□□□□□ -0.06
RTN3-207ENST00000536011 POLGP54098 1239 aaPredicted RBP14.7□□□□□ -0.06
RTN3-207ENST00000536011 AK2P54819 239 aa14.7□□□□□ -0.06
RTN3-207ENST00000536011 COASYQ13057 564 aa14.7□□□□□ -0.06
RTN3-207ENST00000536011 BMS1Q14692 1282 aaKnown RBP14.7□□□□□ -0.06
RTN3-207ENST00000536011 TWF2Q6IBS0 349 aaKnown RBP14.7□□□□□ -0.06
RTN3-207ENST00000536011 KCNT2Q6UVM3 1135 aa14.7□□□□□ -0.06
RTN3-207ENST00000536011 ANO5Q75V66 913 aa14.7□□□□□ -0.06
RTN3-207ENST00000536011 ADGRD2Q7Z7M1 963 aa14.7□□□□□ -0.06
RTN3-207ENST00000536011 RBM23Q86U06 439 aaKnown RBP14.7□□□□□ -0.06
RTN3-207ENST00000536011 RHPN2Q8IUC4 686 aa14.7□□□□□ -0.06
RTN3-207ENST00000536011 SMRP1Q8NCR6 262 aa14.7□□□□□ -0.06
RTN3-207ENST00000536011 SPDYE1Q8NFV5 336 aaPredicted RBP14.7□□□□□ -0.06
RTN3-207ENST00000536011 MRPS27Q92552 414 aaKnown RBP14.7□□□□□ -0.06
RTN3-207ENST00000536011 KHSRPQ92945 711 aaKnown RBP eCLIP14.7□□□□□ -0.062e-6■■□□□ 11.6
RTN3-207ENST00000536011 ZNF668Q96K58 619 aaPredicted RBP14.7□□□□□ -0.06
RTN3-207ENST00000536011 MSLNLQ96KJ4 702 aa14.7□□□□□ -0.06
RTN3-207ENST00000536011 CASD1Q96PB1 797 aa14.7□□□□□ -0.06
RTN3-207ENST00000536011 TRAIPQ9BWF2 469 aa14.7□□□□□ -0.06
RTN3-207ENST00000536011 CWH43Q9H720 699 aa14.7□□□□□ -0.06
RTN3-207ENST00000536011 ENTPD7Q9NQZ7 604 aa14.7□□□□□ -0.06
RTN3-207ENST00000536011 CYP26B1Q9NR63 512 aa14.7□□□□□ -0.06
RTN3-207ENST00000536011 SPG21Q9NZD8 308 aa14.7□□□□□ -0.06
RTN3-207ENST00000536011 A0A087WZ62 844 aa14.69□□□□□ -0.06
RTN3-207ENST00000536011 PRR33A8MZF0 331 aa14.69□□□□□ -0.06
RTN3-207ENST00000536011 STBD1O95210 358 aa14.69□□□□□ -0.06
RTN3-207ENST00000536011 DRP2Q13474 957 aa14.69□□□□□ -0.06
RTN3-207ENST00000536011 TRIM29Q14134 588 aa14.69□□□□□ -0.06
RTN3-207ENST00000536011 OTUD6AQ7L8S5 288 aa14.69□□□□□ -0.06
RTN3-207ENST00000536011 CATSPER4Q7RTX7 472 aa14.69□□□□□ -0.06
RTN3-207ENST00000536011 PSPC1Q8WXF1 523 aaKnown RBP14.69□□□□□ -0.06
RTN3-207ENST00000536011 GTF3C6Q969F1 213 aa14.69□□□□□ -0.06
RTN3-207ENST00000536011 FAM122AQ96E09 287 aa14.69□□□□□ -0.06
RTN3-207ENST00000536011 CEP170P1Q96L14 293 aa14.69□□□□□ -0.06
RTN3-207ENST00000536011 NLRP4Q96MN2 994 aa14.69□□□□□ -0.06
RTN3-207ENST00000536011 CEP89Q96ST8 783 aa14.69□□□□□ -0.06
RTN3-207ENST00000536011 TCF25Q9BQ70 676 aa14.69□□□□□ -0.06
RTN3-207ENST00000536011 FDXACB1Q9BRP7 624 aaPredicted RBP14.69□□□□□ -0.06
RTN3-207ENST00000536011 PIN4Q9Y237 131 aaKnown RBP14.69□□□□□ -0.06
RTN3-207ENST00000536011 TMEM150BA6NC51 233 aa14.68□□□□□ -0.06
RTN3-207ENST00000536011 FAM86C2PA6NEL3 165 aa14.68□□□□□ -0.06
RTN3-207ENST00000536011 EML1O00423 815 aa14.68□□□□□ -0.06
RTN3-207ENST00000536011 FSCN2O14926 492 aa14.68□□□□□ -0.06
RTN3-207ENST00000536011 FGFR4P22455 802 aa14.68□□□□□ -0.06
RTN3-207ENST00000536011 PLA2G5P39877 138 aa14.68□□□□□ -0.06
RTN3-207ENST00000536011 PHKA2P46019 1235 aa14.68□□□□□ -0.06
RTN3-207ENST00000536011 ALDH7A1P49419 539 aaKnown RBP14.68□□□□□ -0.06
RTN3-207ENST00000536011 EPHA7Q15375 998 aa14.68□□□□□ -0.06
RTN3-207ENST00000536011 DUSP6Q16828 381 aa14.68□□□□□ -0.06
RTN3-207ENST00000536011 CLLU1OSQ5K130 101 aa14.68□□□□□ -0.06
RTN3-207ENST00000536011 PLPP4Q5VZY2 271 aa14.68□□□□□ -0.06
RTN3-207ENST00000536011 PLA2G4FQ68DD2 849 aa14.68□□□□□ -0.06
RTN3-207ENST00000536011 GLB1LQ6UWU2 654 aa14.68□□□□□ -0.06
RTN3-207ENST00000536011 ZNF598Q86UK7 904 aaKnown RBP14.68□□□□□ -0.06
RTN3-207ENST00000536011 C4orf19Q8IY42 314 aa14.68□□□□□ -0.06
RTN3-207ENST00000536011 HELQQ8TDG4 1101 aa14.68□□□□□ -0.06
RTN3-207ENST00000536011 TCP11Q8WWU5 503 aa14.68□□□□□ -0.06
RTN3-207ENST00000536011 SH2D3AQ9BRG2 576 aa14.68□□□□□ -0.06
RTN3-207ENST00000536011 LXNQ9BS40 222 aa14.68□□□□□ -0.06
RTN3-207ENST00000536011 ZSWIM4Q9H7M6 989 aa14.68□□□□□ -0.06
RTN3-207ENST00000536011 RNF19AQ9NV58 838 aa14.68□□□□□ -0.06
RTN3-207ENST00000536011 CLEC1BQ9P126 229 aa14.68□□□□□ -0.06
RTN3-207ENST00000536011 HCSTQ9UBK5 93 aa14.68□□□□□ -0.06
RTN3-207ENST00000536011 COL4A3BPQ9Y5P4 624 aa14.68□□□□□ -0.06
RTN3-207ENST00000536011 GLP2RO95838 553 aa14.67□□□□□ -0.06
RTN3-207ENST00000536011 YWHABP31946 246 aaKnown RBP14.67□□□□□ -0.06
RTN3-207ENST00000536011 ERVFC1P60507 584 aa14.67□□□□□ -0.06
RTN3-207ENST00000536011 SMC1AQ14683 1233 aaKnown RBP14.67□□□□□ -0.06
RTN3-207ENST00000536011 NCAPH2Q6IBW4 605 aa14.67□□□□□ -0.06
RTN3-207ENST00000536011 LRRC55Q6ZSA7 311 aa14.67□□□□□ -0.06
RTN3-207ENST00000536011 TMC7Q7Z402 723 aa14.67□□□□□ -0.06
RTN3-207ENST00000536011 OXER1Q8TDS5 423 aa14.67□□□□□ -0.06
RTN3-207ENST00000536011 PGBD4Q96DM1 585 aa14.67□□□□□ -0.06
RTN3-207ENST00000536011 DHX33Q9H6R0 707 aaKnown RBP14.67□□□□□ -0.06
RTN3-207ENST00000536011 C11orf16Q9NQ32 467 aa14.67□□□□□ -0.06
RTN3-207ENST00000536011 RAPGEFL1Q9UHV5 662 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms