RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 UBE2Q1Q7Z7E8 422 aa17.93■□□□□ 0.46
VAMP1-205ENST00000535927 FAM178BQ8IXR5 827 aa17.93■□□□□ 0.46
VAMP1-205ENST00000535927 DAW1Q8N136 415 aa17.93■□□□□ 0.46
VAMP1-205ENST00000535927 TRAPPC12Q8WVT3 735 aa17.93■□□□□ 0.46
VAMP1-205ENST00000535927 PRPF31Q8WWY3 499 aaKnown RBP17.93■□□□□ 0.46
VAMP1-205ENST00000535927 SH2D3AQ9BRG2 576 aa17.93■□□□□ 0.46
VAMP1-205ENST00000535927 BLZF1Q9H2G9 400 aa17.93■□□□□ 0.46
VAMP1-205ENST00000535927 TMEM134Q9H6X4 195 aa17.93■□□□□ 0.46
VAMP1-205ENST00000535927 DACH1Q9UI36 760 aa17.93■□□□□ 0.46
VAMP1-205ENST00000535927 CENPFP49454 3210 aa17.93■□□□□ 0.46
VAMP1-205ENST00000535927 UBE4BO95155 1302 aa17.93■□□□□ 0.46
VAMP1-205ENST00000535927 EIF3DO15371 548 aaKnown RBP eCLIP17.92■□□□□ 0.46
VAMP1-205ENST00000535927 CD4P01730 458 aa17.92■□□□□ 0.46
VAMP1-205ENST00000535927 SNRPFP62306 86 aaKnown RBP17.92■□□□□ 0.46
VAMP1-205ENST00000535927 LAMTOR4Q0VGL1 99 aa17.92■□□□□ 0.46
VAMP1-205ENST00000535927 MKRN4PQ13434 485 aaPredicted RBP17.92■□□□□ 0.46
VAMP1-205ENST00000535927 STIM1Q13586 685 aa17.92■□□□□ 0.46
VAMP1-205ENST00000535927 KMT5BQ4FZB7 885 aa17.92■□□□□ 0.46
VAMP1-205ENST00000535927 FAM26DQ5JW98 314 aa17.92■□□□□ 0.46
VAMP1-205ENST00000535927 FAM26FQ5R3K3 315 aa17.92■□□□□ 0.46
VAMP1-205ENST00000535927 ZNF658Q5TYW1 1059 aaPredicted RBP17.92■□□□□ 0.46
VAMP1-205ENST00000535927 ZNF720Q7Z2F6 126 aa17.92■□□□□ 0.46
VAMP1-205ENST00000535927 SRGAP1Q7Z6B7 1085 aa17.92■□□□□ 0.46
VAMP1-205ENST00000535927 FAM126BQ8IXS8 530 aa17.92■□□□□ 0.46
VAMP1-205ENST00000535927 GRAMD1CQ8IYS0 662 aa17.92■□□□□ 0.46
VAMP1-205ENST00000535927 MLKLQ8NB16 471 aa17.92■□□□□ 0.46
VAMP1-205ENST00000535927 TMEM143Q96AN5 459 aa17.92■□□□□ 0.46
VAMP1-205ENST00000535927 PAWRQ96IZ0 340 aaKnown RBP17.92■□□□□ 0.46
VAMP1-205ENST00000535927 AKT3Q9Y243 479 aa17.92■□□□□ 0.46
VAMP1-205ENST00000535927 PITPNM1O00562 1244 aa17.91■□□□□ 0.46
VAMP1-205ENST00000535927 PRR29P0C7W0 189 aa17.91■□□□□ 0.46
VAMP1-205ENST00000535927 GLRA2P23416 452 aa17.91■□□□□ 0.46
VAMP1-205ENST00000535927 PHKA2P46019 1235 aa17.91■□□□□ 0.46
VAMP1-205ENST00000535927 NPTX2P47972 431 aa17.91■□□□□ 0.46
VAMP1-205ENST00000535927 FXR1P51114 621 aaKnown RBP eCLIP17.91■□□□□ 0.46
VAMP1-205ENST00000535927 CRYBB1P53674 252 aaPredicted RBP17.91■□□□□ 0.46
VAMP1-205ENST00000535927 NCKAP1LP55160 1127 aa17.91■□□□□ 0.46
VAMP1-205ENST00000535927 MORC3Q14149 939 aa17.91■□□□□ 0.46
VAMP1-205ENST00000535927 FOXR2Q6PJQ5 311 aa17.91■□□□□ 0.46
VAMP1-205ENST00000535927 ZBTB8OSQ8IWT0 167 aa17.91■□□□□ 0.46
VAMP1-205ENST00000535927 USP38Q8NB14 1042 aa17.91■□□□□ 0.46
VAMP1-205ENST00000535927 ZHX3Q9H4I2 956 aa17.91■□□□□ 0.46
VAMP1-205ENST00000535927 MRPL44Q9H9J2 332 aaKnown RBP17.91■□□□□ 0.46
VAMP1-205ENST00000535927 KMT5AQ9NQR1 393 aa17.91■□□□□ 0.46
VAMP1-205ENST00000535927 ANO10Q9NW15 660 aa17.91■□□□□ 0.46
VAMP1-205ENST00000535927 CGNQ9P2M7 1197 aaKnown RBP17.91■□□□□ 0.46
VAMP1-205ENST00000535927 NPHP3-ACAD11A0A0J9YXS1 232 aa17.9■□□□□ 0.46
VAMP1-205ENST00000535927 CCDC192P0DO97 292 aa17.9■□□□□ 0.46
VAMP1-205ENST00000535927 CLCN3P51790 818 aa17.9■□□□□ 0.46
VAMP1-205ENST00000535927 PEX3P56589 373 aa17.9■□□□□ 0.46
VAMP1-205ENST00000535927 PTENP60484 403 aa17.9■□□□□ 0.46
VAMP1-205ENST00000535927 GTF2BQ00403 316 aa17.9■□□□□ 0.46
VAMP1-205ENST00000535927 HSP90AA2PQ14568 343 aaPredicted RBP17.9■□□□□ 0.46
VAMP1-205ENST00000535927 CDCA2Q69YH5 1023 aaPredicted RBP17.9■□□□□ 0.46
VAMP1-205ENST00000535927 MAEAQ7L5Y9 396 aa17.9■□□□□ 0.46
VAMP1-205ENST00000535927 RHPN2Q8IUC4 686 aa17.9■□□□□ 0.46
VAMP1-205ENST00000535927 LRRC71Q8N4P6 559 aa17.9■□□□□ 0.46
VAMP1-205ENST00000535927 DEPTORQ8TB45 409 aa17.9■□□□□ 0.46
VAMP1-205ENST00000535927 DNAJB3Q8WWF6 145 aa17.9■□□□□ 0.46
VAMP1-205ENST00000535927 GCOM2Q9BZD3 368 aaPredicted RBP17.9■□□□□ 0.46
VAMP1-205ENST00000535927 TMEM206Q9H813 350 aa17.9■□□□□ 0.46
VAMP1-205ENST00000535927 ARHGAP28Q9P2N2 729 aa17.9■□□□□ 0.46
VAMP1-205ENST00000535927 MAN1B1Q9UKM7 699 aa17.9■□□□□ 0.46
VAMP1-205ENST00000535927 EXOC7Q9UPT5 735 aa17.9■□□□□ 0.46
VAMP1-205ENST00000535927 CCDC169A6NNP5 214 aa17.89■□□□□ 0.45
VAMP1-205ENST00000535927 RSPH10B2B2RC85 870 aa17.89■□□□□ 0.45
VAMP1-205ENST00000535927 B4GALT4O60513 344 aa17.89■□□□□ 0.45
VAMP1-205ENST00000535927 RSPH10BP0C881 870 aa17.89■□□□□ 0.45
VAMP1-205ENST00000535927 GPC3P51654 580 aa17.89■□□□□ 0.45
VAMP1-205ENST00000535927 NLRP12P59046 1061 aa17.89■□□□□ 0.45
VAMP1-205ENST00000535927 MRPS6P82932 125 aaKnown RBP17.89■□□□□ 0.45
VAMP1-205ENST00000535927 NCBP1Q09161 790 aaKnown RBP17.89■□□□□ 0.45
VAMP1-205ENST00000535927 RAD51AP2Q09MP3 1159 aa17.89■□□□□ 0.45
VAMP1-205ENST00000535927 HIC1Q14526 733 aa17.89■□□□□ 0.45
VAMP1-205ENST00000535927 FAM187BQ17R55 369 aa17.89■□□□□ 0.45
VAMP1-205ENST00000535927 BMT2Q1RMZ1 405 aa17.89■□□□□ 0.45
VAMP1-205ENST00000535927 HAUS6Q7Z4H7 955 aa17.89■□□□□ 0.45
VAMP1-205ENST00000535927 SFR1Q86XK3 245 aa17.89■□□□□ 0.45
VAMP1-205ENST00000535927 GUF1Q8N442 669 aaKnown RBP17.89■□□□□ 0.45
VAMP1-205ENST00000535927 RNF149Q8NC42 400 aa17.89■□□□□ 0.45
VAMP1-205ENST00000535927 ZNF507Q8TCN5 953 aa17.89■□□□□ 0.45
VAMP1-205ENST00000535927 PRIMPOLQ96LW4 560 aa17.89■□□□□ 0.45
VAMP1-205ENST00000535927 CTAGE1Q96RT6 745 aa17.89■□□□□ 0.45
VAMP1-205ENST00000535927 STRA6Q9BX79 667 aa17.89■□□□□ 0.45
VAMP1-205ENST00000535927 CELF4Q9BZC1 486 aaKnown RBP17.89■□□□□ 0.45
VAMP1-205ENST00000535927 GPRC5CQ9NQ84 441 aa17.89■□□□□ 0.45
VAMP1-205ENST00000535927 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.88■□□□□ 0.45
VAMP1-205ENST00000535927 SFI1A8K8P3 1242 aa17.88■□□□□ 0.45
VAMP1-205ENST00000535927 K7ERI5 159 aa17.88■□□□□ 0.45
VAMP1-205ENST00000535927 GPR32O75388 356 aa17.88■□□□□ 0.45
VAMP1-205ENST00000535927 EIF4BP23588 611 aaKnown RBP17.88■□□□□ 0.45
VAMP1-205ENST00000535927 NLRP11P59045 1033 aaKnown RBP17.88■□□□□ 0.45
VAMP1-205ENST00000535927 ZNF200P98182 395 aaPredicted RBP17.88■□□□□ 0.45
VAMP1-205ENST00000535927 CAPSQ13938 189 aa17.88■□□□□ 0.45
VAMP1-205ENST00000535927 ZSCAN23Q3MJ62 389 aa17.88■□□□□ 0.45
VAMP1-205ENST00000535927 MYOCDQ8IZQ8 938 aa17.88■□□□□ 0.45
VAMP1-205ENST00000535927 TMEM161BQ8NDZ6 487 aa17.88■□□□□ 0.45
VAMP1-205ENST00000535927 GOLGA5Q8TBA6 731 aa17.88■□□□□ 0.45
VAMP1-205ENST00000535927 ASAP3Q8TDY4 903 aa17.88■□□□□ 0.45
VAMP1-205ENST00000535927 DHTKD1Q96HY7 919 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms