RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 TMEM161AQ9NX61 479 aa18.29■□□□□ 0.52
ATL3-202ENST00000535789 LMCD1Q9NZU5 365 aa18.29■□□□□ 0.52
ATL3-202ENST00000535789 NCOR1O75376 2440 aa18.29■□□□□ 0.52
ATL3-202ENST00000535789 STAG3L1P0CL83 205 aa18.28■□□□□ 0.52
ATL3-202ENST00000535789 LAMTOR4Q0VGL1 99 aa18.28■□□□□ 0.52
ATL3-202ENST00000535789 GNL2Q13823 731 aaKnown RBP18.28■□□□□ 0.52
ATL3-202ENST00000535789 CLLU1OSQ5K130 101 aa18.28■□□□□ 0.52
ATL3-202ENST00000535789 ODR4Q5SWX8 454 aa18.28■□□□□ 0.52
ATL3-202ENST00000535789 FERMT3Q86UX7 667 aa18.28■□□□□ 0.52
ATL3-202ENST00000535789 ECHDC2Q86YB7 292 aa18.28■□□□□ 0.52
ATL3-202ENST00000535789 ZNF710Q8N1W2 664 aa18.28■□□□□ 0.52
ATL3-202ENST00000535789 MTRQ99707 1265 aa18.28■□□□□ 0.52
ATL3-202ENST00000535789 GCOM2Q9BZD3 368 aaPredicted RBP18.28■□□□□ 0.52
ATL3-202ENST00000535789 ELAC1Q9H777 363 aaKnown RBP18.28■□□□□ 0.52
ATL3-202ENST00000535789 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.28■□□□□ 0.52
ATL3-202ENST00000535789 ANKEF1Q9NU02 776 aa18.28■□□□□ 0.52
ATL3-202ENST00000535789 DNAJB1P25685 340 aa18.27■□□□□ 0.52
ATL3-202ENST00000535789 DNM2P50570 870 aa18.27■□□□□ 0.52
ATL3-202ENST00000535789 FXR2P51116 673 aaKnown RBP eCLIP18.27■□□□□ 0.52
ATL3-202ENST00000535789 PTGDRQ13258 359 aa18.27■□□□□ 0.52
ATL3-202ENST00000535789 LRRC55Q6ZSA7 311 aa18.27■□□□□ 0.52
ATL3-202ENST00000535789 OTUD6AQ7L8S5 288 aa18.27■□□□□ 0.52
ATL3-202ENST00000535789 PSPC1Q8WXF1 523 aaKnown RBP18.27■□□□□ 0.52
ATL3-202ENST00000535789 MRPL38Q96DV4 380 aaKnown RBP18.27■□□□□ 0.52
ATL3-202ENST00000535789 CASD1Q96PB1 797 aa18.27■□□□□ 0.52
ATL3-202ENST00000535789 JPH2Q9BR39 696 aaPredicted RBP18.27■□□□□ 0.52
ATL3-202ENST00000535789 POLR3CQ9BUI4 534 aaPredicted RBP18.27■□□□□ 0.52
ATL3-202ENST00000535789 CWH43Q9H720 699 aa18.27■□□□□ 0.52
ATL3-202ENST00000535789 TUFT1Q9NNX1 390 aa18.27■□□□□ 0.52
ATL3-202ENST00000535789 LRFN2Q9ULH4 789 aa18.27■□□□□ 0.52
ATL3-202ENST00000535789 NOL7Q9UMY1 257 aaKnown RBP18.27■□□□□ 0.52
ATL3-202ENST00000535789 PCDHB7Q9Y5E2 793 aa18.27■□□□□ 0.52
ATL3-202ENST00000535789 TBKBP1A7MCY6 615 aa18.26■□□□□ 0.51
ATL3-202ENST00000535789 MEIS3P2A8K0S8 358 aa18.26■□□□□ 0.51
ATL3-202ENST00000535789 PP2D1A8MPX8 630 aa18.26■□□□□ 0.51
ATL3-202ENST00000535789 CAPSQ13938 189 aa18.26■□□□□ 0.51
ATL3-202ENST00000535789 FAM43BQ6ZT52 329 aaPredicted RBP18.26■□□□□ 0.51
ATL3-202ENST00000535789 IGSF22Q8N9C0 903 aa18.26■□□□□ 0.51
ATL3-202ENST00000535789 ATP6V0A4Q9HBG4 840 aa18.26■□□□□ 0.51
ATL3-202ENST00000535789 GPRC5CQ9NQ84 441 aa18.26■□□□□ 0.51
ATL3-202ENST00000535789 AGPAT5Q9NUQ2 364 aa18.26■□□□□ 0.51
ATL3-202ENST00000535789 SMC3Q9UQE7 1217 aa18.26■□□□□ 0.51
ATL3-202ENST00000535789 BDP1A6H8Y1 2624 aa18.26■□□□□ 0.51
ATL3-202ENST00000535789 PDCD11Q14690 1871 aaKnown RBP18.25■□□□□ 0.51
ATL3-202ENST00000535789 A0A0U1RQF3 1178 aa18.25■□□□□ 0.51
ATL3-202ENST00000535789 DLL1O00548 723 aa18.25■□□□□ 0.51
ATL3-202ENST00000535789 GAS2O43903 313 aaKnown RBP18.25■□□□□ 0.51
ATL3-202ENST00000535789 USO1O60763 962 aaKnown RBP18.25■□□□□ 0.51
ATL3-202ENST00000535789 ITGB1P05556 798 aa18.25■□□□□ 0.51
ATL3-202ENST00000535789 SRGAP2CP0DJJ0 459 aa18.25■□□□□ 0.51
ATL3-202ENST00000535789 SFPQP23246 707 aaKnown RBP eCLIP18.25■□□□□ 0.51
ATL3-202ENST00000535789 GLRA2P23416 452 aa18.25■□□□□ 0.51
ATL3-202ENST00000535789 RPA1P27694 616 aa18.25■□□□□ 0.51
ATL3-202ENST00000535789 ARL2P36404 184 aa18.25■□□□□ 0.51
ATL3-202ENST00000535789 MCTP1Q6DN14 999 aa18.25■□□□□ 0.51
ATL3-202ENST00000535789 RNF149Q8NC42 400 aa18.25■□□□□ 0.51
ATL3-202ENST00000535789 LPPQ93052 612 aa18.25■□□□□ 0.51
ATL3-202ENST00000535789 MMTAG2Q9BU76 263 aaKnown RBP18.25■□□□□ 0.51
ATL3-202ENST00000535789 ALG13Q9NP73 1137 aaKnown RBP18.25■□□□□ 0.51
ATL3-202ENST00000535789 PIN4Q9Y237 131 aaKnown RBP18.25■□□□□ 0.51
ATL3-202ENST00000535789 RWDD3Q9Y3V2 267 aa18.25■□□□□ 0.51
ATL3-202ENST00000535789 DGAT1O75907 488 aa18.24■□□□□ 0.51
ATL3-202ENST00000535789 CSPG5O95196 566 aa18.24■□□□□ 0.51
ATL3-202ENST00000535789 RB1P06400 928 aa18.24■□□□□ 0.51
ATL3-202ENST00000535789 ZSCAN20P17040 1043 aaPredicted RBP18.24■□□□□ 0.51
ATL3-202ENST00000535789 HOXA11P31270 313 aaPredicted RBP18.24■□□□□ 0.51
ATL3-202ENST00000535789 PHKA2P46019 1235 aa18.24■□□□□ 0.51
ATL3-202ENST00000535789 KCNQ1P51787 676 aa18.24■□□□□ 0.51
ATL3-202ENST00000535789 CDC42EP1Q00587 391 aa18.24■□□□□ 0.51
ATL3-202ENST00000535789 AMHR2Q16671 573 aa18.24■□□□□ 0.51
ATL3-202ENST00000535789 UBXN11Q5T124 520 aa18.24■□□□□ 0.51
ATL3-202ENST00000535789 HSCBQ8IWL3 235 aa18.24■□□□□ 0.51
ATL3-202ENST00000535789 KLHL23Q8NBE8 558 aa18.24■□□□□ 0.51
ATL3-202ENST00000535789 TCP11Q8WWU5 503 aa18.24■□□□□ 0.51
ATL3-202ENST00000535789 BSNDQ8WZ55 320 aa18.24■□□□□ 0.51
ATL3-202ENST00000535789 P2RX5Q93086 422 aa18.24■□□□□ 0.51
ATL3-202ENST00000535789 C11orf84Q9BUA3 381 aaPredicted RBP18.24■□□□□ 0.51
ATL3-202ENST00000535789 TRAIPQ9BWF2 469 aa18.24■□□□□ 0.51
ATL3-202ENST00000535789 TYW1Q9NV66 732 aaKnown RBP18.24■□□□□ 0.51
ATL3-202ENST00000535789 DBR1Q9UK59 544 aaKnown RBP18.24■□□□□ 0.51
ATL3-202ENST00000535789 PLAGL2Q9UPG8 496 aa18.24■□□□□ 0.51
ATL3-202ENST00000535789 KIF3AQ9Y496 699 aa18.24■□□□□ 0.51
ATL3-202ENST00000535789 PCDHGC5Q9Y5F6 944 aa18.24■□□□□ 0.51
ATL3-202ENST00000535789 K7ELQ4 463 aaPredicted RBP18.23■□□□□ 0.51
ATL3-202ENST00000535789 CDC25AP30304 524 aa18.23■□□□□ 0.51
ATL3-202ENST00000535789 IRS1P35568 1242 aa18.23■□□□□ 0.51
ATL3-202ENST00000535789 PTENP60484 403 aa18.23■□□□□ 0.51
ATL3-202ENST00000535789 ATP2C1P98194 919 aaPredicted RBP18.23■□□□□ 0.51
ATL3-202ENST00000535789 MBTD1Q05BQ5 628 aa18.23■□□□□ 0.51
ATL3-202ENST00000535789 SKIV2LQ15477 1246 aaKnown RBP18.23■□□□□ 0.51
ATL3-202ENST00000535789 TCEAL5Q5H9L2 206 aa18.23■□□□□ 0.51
ATL3-202ENST00000535789 TJAP1Q5JTD0 557 aa18.23■□□□□ 0.51
ATL3-202ENST00000535789 CATSPER4Q7RTX7 472 aa18.23■□□□□ 0.51
ATL3-202ENST00000535789 SRGAP1Q7Z6B7 1085 aa18.23■□□□□ 0.51
ATL3-202ENST00000535789 IFNLR1Q8IU57 520 aaPredicted RBP18.23■□□□□ 0.51
ATL3-202ENST00000535789 COLGALT1Q8NBJ5 622 aa18.23■□□□□ 0.51
ATL3-202ENST00000535789 SPPL3Q8TCT6 385 aa18.23■□□□□ 0.51
ATL3-202ENST00000535789 HELQQ8TDG4 1101 aa18.23■□□□□ 0.51
ATL3-202ENST00000535789 ATXN2LQ8WWM7 1075 aaKnown RBP18.23■□□□□ 0.51
ATL3-202ENST00000535789 ASB2Q96Q27 587 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms