RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 ZNF292O60281 2723 aa12.64□□□□□ -0.39
CLSTN3-206ENST00000535668 KMT2EQ8IZD2 1858 aa12.64□□□□□ -0.39
CLSTN3-206ENST00000535668 HIDE1A8MVS5 230 aa12.64□□□□□ -0.39
CLSTN3-206ENST00000535668 PROB1E7EW31 1015 aa12.64□□□□□ -0.39
CLSTN3-206ENST00000535668 PER2O15055 1255 aa12.64□□□□□ -0.39
CLSTN3-206ENST00000535668 INPPL1O15357 1258 aa12.64□□□□□ -0.39
CLSTN3-206ENST00000535668 GAS7O60861 476 aa12.64□□□□□ -0.39
CLSTN3-206ENST00000535668 MAFO75444 373 aaPredicted RBP12.64□□□□□ -0.39
CLSTN3-206ENST00000535668 RAB27AP51159 221 aa12.64□□□□□ -0.39
CLSTN3-206ENST00000535668 TBC1D8BQ0IIM8 1120 aa12.64□□□□□ -0.39
CLSTN3-206ENST00000535668 APOBRQ0VD83 1088 aa12.64□□□□□ -0.39
CLSTN3-206ENST00000535668 TCF15Q12870 199 aa12.64□□□□□ -0.39
CLSTN3-206ENST00000535668 SMC1AQ14683 1233 aaKnown RBP12.64□□□□□ -0.39
CLSTN3-206ENST00000535668 TPRNQ4KMQ1 711 aa12.64□□□□□ -0.39
CLSTN3-206ENST00000535668 EXOC8Q8IYI6 725 aa12.64□□□□□ -0.39
CLSTN3-206ENST00000535668 ZDHHC14Q8IZN3 488 aa12.64□□□□□ -0.39
CLSTN3-206ENST00000535668 PRSS33Q8NF86 280 aa12.64□□□□□ -0.39
CLSTN3-206ENST00000535668 ZNF274Q96GC6 653 aaPredicted RBP12.64□□□□□ -0.39
CLSTN3-206ENST00000535668 CCDC136Q96JN2 1154 aa12.64□□□□□ -0.39
CLSTN3-206ENST00000535668 JPH2Q9BR39 696 aaPredicted RBP12.64□□□□□ -0.39
CLSTN3-206ENST00000535668 TM6SF1Q9BZW5 370 aa12.64□□□□□ -0.39
CLSTN3-206ENST00000535668 ZSWIM6Q9HCJ5 1215 aa12.64□□□□□ -0.39
CLSTN3-206ENST00000535668 HCSTQ9UBK5 93 aa12.64□□□□□ -0.39
CLSTN3-206ENST00000535668 DAXXQ9UER7 740 aaPredicted RBP12.64□□□□□ -0.39
CLSTN3-206ENST00000535668 NR2E1Q9Y466 385 aa12.64□□□□□ -0.39
CLSTN3-206ENST00000535668 HCFC2Q9Y5Z7 792 aa12.64□□□□□ -0.39
CLSTN3-206ENST00000535668 DMDP11532 3685 aa12.63□□□□□ -0.39
CLSTN3-206ENST00000535668 EFEMP2O95967 443 aa12.63□□□□□ -0.39
CLSTN3-206ENST00000535668 CENPBP07199 599 aaPredicted RBP12.63□□□□□ -0.39
CLSTN3-206ENST00000535668 PHKA2P46019 1235 aa12.63□□□□□ -0.39
CLSTN3-206ENST00000535668 ALDH7A1P49419 539 aaKnown RBP12.63□□□□□ -0.39
CLSTN3-206ENST00000535668 PPP2R5CQ13362 524 aa12.63□□□□□ -0.39
CLSTN3-206ENST00000535668 LRCH2Q5VUJ6 765 aa12.63□□□□□ -0.39
CLSTN3-206ENST00000535668 PPP4R3AQ6IN85 833 aa12.63□□□□□ -0.39
CLSTN3-206ENST00000535668 MRPL10Q7Z7H8 261 aaKnown RBP12.63□□□□□ -0.39
CLSTN3-206ENST00000535668 DDX53Q86TM3 631 aaKnown RBP12.63□□□□□ -0.39
CLSTN3-206ENST00000535668 GPR65Q8IYL9 337 aa12.63□□□□□ -0.39
CLSTN3-206ENST00000535668 ABI1Q8IZP0 508 aa12.63□□□□□ -0.39
CLSTN3-206ENST00000535668 FAM20AQ96MK3 541 aa12.63□□□□□ -0.39
CLSTN3-206ENST00000535668 TEKT3Q9BXF9 490 aa12.63□□□□□ -0.39
CLSTN3-206ENST00000535668 GCOM2Q9BZD3 368 aaPredicted RBP12.63□□□□□ -0.39
CLSTN3-206ENST00000535668 ZBP1Q9H171 429 aa12.63□□□□□ -0.39
CLSTN3-206ENST00000535668 UNC45AQ9H3U1 944 aa12.63□□□□□ -0.39
CLSTN3-206ENST00000535668 DZANK1Q9NVP4 752 aa12.63□□□□□ -0.39
CLSTN3-206ENST00000535668 PCDHA4Q9UN74 947 aa12.63□□□□□ -0.39
CLSTN3-206ENST00000535668 AKT3Q9Y243 479 aa12.63□□□□□ -0.39
CLSTN3-206ENST00000535668 EP300Q09472 2414 aaPredicted RBP12.62□□□□□ -0.39
CLSTN3-206ENST00000535668 WDR87Q6ZQQ6 2873 aa12.62□□□□□ -0.39
CLSTN3-206ENST00000535668 TBX3O15119 743 aa12.62□□□□□ -0.39
CLSTN3-206ENST00000535668 LILRB3O75022 631 aa12.62□□□□□ -0.39
CLSTN3-206ENST00000535668 CLASP2O75122 1294 aaKnown RBP12.62□□□□□ -0.39
CLSTN3-206ENST00000535668 PPFIA3O75145 1194 aa12.62□□□□□ -0.39
CLSTN3-206ENST00000535668 REC8O95072 547 aa12.62□□□□□ -0.39
CLSTN3-206ENST00000535668 CTSAP10619 480 aa12.62□□□□□ -0.39
CLSTN3-206ENST00000535668 SFPQP23246 707 aaKnown RBP eCLIP12.62□□□□□ -0.39
CLSTN3-206ENST00000535668 MTHFRP42898 656 aa12.62□□□□□ -0.39
CLSTN3-206ENST00000535668 DNM2P50570 870 aa12.62□□□□□ -0.39
CLSTN3-206ENST00000535668 RBM10P98175 930 aaKnown RBP12.62□□□□□ -0.39
CLSTN3-206ENST00000535668 AKAP17AQ02040 695 aaKnown RBP12.62□□□□□ -0.39
CLSTN3-206ENST00000535668 POU5F1BQ06416 359 aa12.62□□□□□ -0.39
CLSTN3-206ENST00000535668 BMS1Q14692 1282 aaKnown RBP12.62□□□□□ -0.39
CLSTN3-206ENST00000535668 UGCGQ16739 394 aa12.62□□□□□ -0.39
CLSTN3-206ENST00000535668 SPOUT1Q5T280 376 aaKnown RBP12.62□□□□□ -0.39
CLSTN3-206ENST00000535668 IER5LQ5T953 404 aa12.62□□□□□ -0.39
CLSTN3-206ENST00000535668 SUGP1Q8IWZ8 645 aaKnown RBP12.62□□□□□ -0.39
CLSTN3-206ENST00000535668 LRRC71Q8N4P6 559 aa12.62□□□□□ -0.39
CLSTN3-206ENST00000535668 TBCKQ8TEA7 893 aa12.62□□□□□ -0.39
CLSTN3-206ENST00000535668 PHKBQ93100 1093 aa12.62□□□□□ -0.39
CLSTN3-206ENST00000535668 JAKMIP1Q96N16 626 aaKnown RBP12.62□□□□□ -0.39
CLSTN3-206ENST00000535668 IFT122Q9HBG6 1241 aa12.62□□□□□ -0.39
CLSTN3-206ENST00000535668 KCNMB3Q9NPA1 279 aa12.62□□□□□ -0.39
CLSTN3-206ENST00000535668 SORCS3Q9UPU3 1222 aa12.62□□□□□ -0.39
CLSTN3-206ENST00000535668 GAS2O43903 313 aaKnown RBP12.61□□□□□ -0.39
CLSTN3-206ENST00000535668 DEXIO95424 95 aa12.61□□□□□ -0.39
CLSTN3-206ENST00000535668 AVPR2P30518 371 aa12.61□□□□□ -0.39
CLSTN3-206ENST00000535668 TECP42680 631 aa12.61□□□□□ -0.39
CLSTN3-206ENST00000535668 BCAR1P56945 870 aa12.61□□□□□ -0.39
CLSTN3-206ENST00000535668 PSMC5P62195 406 aa12.61□□□□□ -0.39
CLSTN3-206ENST00000535668 FGD1P98174 961 aa12.61□□□□□ -0.39
CLSTN3-206ENST00000535668 TOB2Q14106 344 aaPredicted RBP12.61□□□□□ -0.39
CLSTN3-206ENST00000535668 KIAA1841Q6NSI8 718 aa12.61□□□□□ -0.39
CLSTN3-206ENST00000535668 CYP26C1Q6V0L0 522 aa12.61□□□□□ -0.39
CLSTN3-206ENST00000535668 ANO5Q75V66 913 aa12.61□□□□□ -0.39
CLSTN3-206ENST00000535668 RUFY3Q7L099 469 aa12.61□□□□□ -0.39
CLSTN3-206ENST00000535668 TMC7Q7Z402 723 aa12.61□□□□□ -0.39
CLSTN3-206ENST00000535668 PPFIBP1Q86W92 1011 aa12.61□□□□□ -0.39
CLSTN3-206ENST00000535668 PLCD3Q8N3E9 789 aa12.61□□□□□ -0.39
CLSTN3-206ENST00000535668 SLC22A17Q8WUG5 538 aa12.61□□□□□ -0.39
CLSTN3-206ENST00000535668 IGSF21Q96ID5 467 aa12.61□□□□□ -0.39
CLSTN3-206ENST00000535668 RPGRIP1Q96KN7 1286 aa12.61□□□□□ -0.39
CLSTN3-206ENST00000535668 RIPOR3Q96MK2 946 aa12.61□□□□□ -0.39
CLSTN3-206ENST00000535668 DHX33Q9H6R0 707 aaKnown RBP12.61□□□□□ -0.39
CLSTN3-206ENST00000535668 ENTPD7Q9NQZ7 604 aa12.61□□□□□ -0.39
CLSTN3-206ENST00000535668 SAMM50Q9Y512 469 aa12.61□□□□□ -0.39
CLSTN3-206ENST00000535668 ZMYM2Q9UBW7 1377 aa12.6□□□□□ -0.39
CLSTN3-206ENST00000535668 ST18O60284 1047 aa12.6□□□□□ -0.39
CLSTN3-206ENST00000535668 DKC1O60832 514 aaKnown RBP eCLIP12.6□□□□□ -0.394e-8■■■■□ 20.4
CLSTN3-206ENST00000535668 OFD1O75665 1012 aa12.6□□□□□ -0.39
CLSTN3-206ENST00000535668 GALTP07902 379 aa12.6□□□□□ -0.39
CLSTN3-206ENST00000535668 CPA1P15085 419 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms