RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 TWF2Q6IBS0 349 aaKnown RBP13.49□□□□□ -0.25
SPG11-203ENST00000535302 RTKN2Q8IZC4 609 aa13.49□□□□□ -0.25
SPG11-203ENST00000535302 CCDC124Q96CT7 223 aaKnown RBP13.49□□□□□ -0.25
SPG11-203ENST00000535302 SLC24A3Q9HC58 644 aa13.49□□□□□ -0.25
SPG11-203ENST00000535302 WDR64B1ANS9 1081 aa13.49□□□□□ -0.25
SPG11-203ENST00000535302 SNX2O60749 519 aa13.49□□□□□ -0.25
SPG11-203ENST00000535302 C16orf87Q6PH81 154 aa13.49□□□□□ -0.25
SPG11-203ENST00000535302 TMEM179Q6ZVK1 233 aa13.49□□□□□ -0.25
SPG11-203ENST00000535302 FAM160B2Q86V87 743 aa13.49□□□□□ -0.25
SPG11-203ENST00000535302 ANAPC7Q9UJX3 599 aa13.49□□□□□ -0.25
SPG11-203ENST00000535302 AATKQ6ZMQ8 1374 aa13.49□□□□□ -0.25
SPG11-203ENST00000535302 TBC1D1Q86TI0 1168 aaPredicted RBP13.49□□□□□ -0.25
SPG11-203ENST00000535302 SAYSD1Q9NPB0 183 aa13.49□□□□□ -0.25
SPG11-203ENST00000535302 CASS4Q9NQ75 786 aa13.49□□□□□ -0.25
SPG11-203ENST00000535302 UBA6A0AVT1 1052 aaPredicted RBP13.49□□□□□ -0.25
SPG11-203ENST00000535302 WBP4O75554 376 aaKnown RBP13.49□□□□□ -0.25
SPG11-203ENST00000535302 ZNF568Q3ZCX4 644 aa13.49□□□□□ -0.25
SPG11-203ENST00000535302 CDHR1Q96JP9 859 aa13.49□□□□□ -0.25
SPG11-203ENST00000535302 ATP6V0A4Q9HBG4 840 aa13.49□□□□□ -0.25
SPG11-203ENST00000535302 ABCB6Q9NP58 842 aa13.49□□□□□ -0.25
SPG11-203ENST00000535302 H7C1W4 665 aa13.49□□□□□ -0.25
SPG11-203ENST00000535302 MOCS2O96007 188 aaPredicted RBP13.49□□□□□ -0.25
SPG11-203ENST00000535302 CYP4F11Q9HBI6 524 aa13.49□□□□□ -0.25
SPG11-203ENST00000535302 DENND3A2RUS2 1198 aa13.49□□□□□ -0.25
SPG11-203ENST00000535302 RESP18Q5W5W9 173 aa13.49□□□□□ -0.25
SPG11-203ENST00000535302 BRINP3Q76B58 766 aa13.49□□□□□ -0.25
SPG11-203ENST00000535302 ENOX1Q8TC92 643 aaKnown RBP13.49□□□□□ -0.25
SPG11-203ENST00000535302 RABGGTAQ92696 567 aa13.49□□□□□ -0.25
SPG11-203ENST00000535302 FSD1LQ9BXM9 530 aa13.49□□□□□ -0.25
SPG11-203ENST00000535302 VPS11Q9H270 941 aa13.49□□□□□ -0.25
SPG11-203ENST00000535302 ZSCAN32Q9NX65 697 aa13.49□□□□□ -0.25
SPG11-203ENST00000535302 ZBTB5O15062 677 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 SLC8A1P32418 973 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 PRELPP51888 382 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 PADI6Q6TGC4 694 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 TEKT4Q8WW24 435 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 SLC8A2Q9UPR5 921 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 ATP8B3O60423 1300 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 TADA3O75528 432 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 MCF2P10911 925 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 RNF25Q96BH1 459 aaPredicted RBP13.48□□□□□ -0.25
SPG11-203ENST00000535302 DCTN4Q9UJW0 460 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 SNX24Q9Y343 169 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 ATP7BP35670 1465 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 CLDN3O15551 220 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 ZBED6P86452 979 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 RUNDC3BQ96NL0 473 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 NDFIP2Q9NV92 336 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 RNF181Q9P0P0 153 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 LRRC53A6NM62 1247 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 CHRNA5P30532 468 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 AP1B1Q10567 949 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 ALKBH5Q6P6C2 394 aaKnown RBP13.48□□□□□ -0.25
SPG11-203ENST00000535302 EXOC8Q8IYI6 725 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 ADGRF4Q8IZF3 695 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 ENAHQ8N8S7 591 aaPredicted RBP13.48□□□□□ -0.25
SPG11-203ENST00000535302 ZMYND12Q9H0C1 365 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 CAPN10Q9HC96 672 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 ALG13Q9NP73 1137 aaKnown RBP13.48□□□□□ -0.25
SPG11-203ENST00000535302 PPARGC1AQ9UBK2 798 aaKnown RBP13.48□□□□□ -0.25
SPG11-203ENST00000535302 GABBR1Q9UBS5 961 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 PRCPP42785 496 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 SPP2Q13103 211 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 STXBP2Q15833 593 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 KLC3Q6P597 504 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 TRMT2AQ8IZ69 625 aaKnown RBP13.48□□□□□ -0.25
SPG11-203ENST00000535302 MXD3Q9BW11 206 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 ADA2Q9NZK5 511 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 L3MBTL1Q9Y468 752 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 FOXN1O15353 648 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 SUPT3HO75486 399 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 ZNF699Q32M78 642 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 ZNF667Q5HYK9 610 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 ARL8AQ96BM9 186 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 C11orf70Q9BRQ4 267 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 CD209Q9NNX6 404 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 LZTS1Q9Y250 596 aa13.48□□□□□ -0.25
SPG11-203ENST00000535302 RRP15Q9Y3B9 282 aaKnown RBP13.48□□□□□ -0.25
SPG11-203ENST00000535302 EIF3CLB5ME19 914 aaKnown RBP13.47□□□□□ -0.25
SPG11-203ENST00000535302 RAD54LQ92698 747 aa13.47□□□□□ -0.25
SPG11-203ENST00000535302 EIF3CQ99613 913 aaKnown RBP13.47□□□□□ -0.25
SPG11-203ENST00000535302 MED4Q9NPJ6 270 aa13.47□□□□□ -0.25
SPG11-203ENST00000535302 KLHL8Q9P2G9 620 aaPredicted RBP13.47□□□□□ -0.25
SPG11-203ENST00000535302 CPDO75976 1380 aa13.47□□□□□ -0.25
SPG11-203ENST00000535302 M0QYV0 167 aa13.47□□□□□ -0.25
SPG11-203ENST00000535302 RASGRF2O14827 1237 aa13.47□□□□□ -0.25
SPG11-203ENST00000535302 ARMCX2Q7L311 632 aa13.47□□□□□ -0.25
SPG11-203ENST00000535302 TMC4Q7Z404 712 aa13.47□□□□□ -0.25
SPG11-203ENST00000535302 SH3KBP1Q96B97 665 aa13.47□□□□□ -0.25
SPG11-203ENST00000535302 GGT7Q9UJ14 662 aa13.47□□□□□ -0.25
SPG11-203ENST00000535302 AFF2P51816 1311 aa13.47□□□□□ -0.25
SPG11-203ENST00000535302 COL15A1P39059 1388 aa13.47□□□□□ -0.25
SPG11-203ENST00000535302 VCAM1P19320 739 aa13.47□□□□□ -0.25
SPG11-203ENST00000535302 COASYQ13057 564 aa13.47□□□□□ -0.25
SPG11-203ENST00000535302 THEMIS2Q5TEJ8 643 aa13.47□□□□□ -0.25
SPG11-203ENST00000535302 IFNLR1Q8IU57 520 aaPredicted RBP13.47□□□□□ -0.25
SPG11-203ENST00000535302 SPZ1Q9BXG8 430 aa13.47□□□□□ -0.25
SPG11-203ENST00000535302 ZNF302Q9NR11 478 aa13.47□□□□□ -0.25
SPG11-203ENST00000535302 CNOT8Q9UFF9 292 aaKnown RBP13.47□□□□□ -0.25
SPG11-203ENST00000535302 MYO5CQ9NQX4 1742 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms