RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 ZBTB10Q96DT7 871 aa22.33■■□□□ 1.17
TNFRSF1A-205ENST00000534885 ACCSQ96QU6 501 aa22.33■■□□□ 1.17
TNFRSF1A-205ENST00000534885 PPME1Q9Y570 386 aa22.33■■□□□ 1.17
TNFRSF1A-205ENST00000534885 CASP4P49662 377 aa22.32■■□□□ 1.16
TNFRSF1A-205ENST00000534885 LRMPQ12912 555 aa22.32■■□□□ 1.16
TNFRSF1A-205ENST00000534885 DGKDQ16760 1214 aa22.32■■□□□ 1.16
TNFRSF1A-205ENST00000534885 LRRC71Q8N4P6 559 aa22.32■■□□□ 1.16
TNFRSF1A-205ENST00000534885 TRPV1Q8NER1 839 aa22.32■■□□□ 1.16
TNFRSF1A-205ENST00000534885 TMEM206Q9H813 350 aa22.32■■□□□ 1.16
TNFRSF1A-205ENST00000534885 RRAGDQ9NQL2 400 aaPredicted RBP22.32■■□□□ 1.16
TNFRSF1A-205ENST00000534885 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.32■■□□□ 1.16
TNFRSF1A-205ENST00000534885 TBX20Q9UMR3 447 aa22.32■■□□□ 1.16
TNFRSF1A-205ENST00000534885 EVPLQ92817 2033 aa22.32■■□□□ 1.16
TNFRSF1A-205ENST00000534885 H3BRB1 525 aa22.32■■□□□ 1.16
TNFRSF1A-205ENST00000534885 AKAP3O75969 853 aa22.32■■□□□ 1.16
TNFRSF1A-205ENST00000534885 INSRRP14616 1297 aa22.32■■□□□ 1.16
TNFRSF1A-205ENST00000534885 MARSP56192 900 aaKnown RBP22.32■■□□□ 1.16
TNFRSF1A-205ENST00000534885 MKRN4PQ13434 485 aaPredicted RBP22.32■■□□□ 1.16
TNFRSF1A-205ENST00000534885 CEP135Q66GS9 1140 aa22.32■■□□□ 1.16
TNFRSF1A-205ENST00000534885 TUT1Q9H6E5 874 aaKnown RBP22.32■■□□□ 1.16
TNFRSF1A-205ENST00000534885 SUGCTQ9HAC7 445 aa22.32■■□□□ 1.16
TNFRSF1A-205ENST00000534885 ARHGAP28Q9P2N2 729 aa22.32■■□□□ 1.16
TNFRSF1A-205ENST00000534885 FAM184BQ9ULE4 1060 aa22.32■■□□□ 1.16
TNFRSF1A-205ENST00000534885 CASP8AP2Q9UKL3 1982 aa22.32■■□□□ 1.16
TNFRSF1A-205ENST00000534885 A6NJR5 290 aa22.31■■□□□ 1.16
TNFRSF1A-205ENST00000534885 GNA14O95837 355 aa22.31■■□□□ 1.16
TNFRSF1A-205ENST00000534885 RPL13P26373 211 aaKnown RBP22.31■■□□□ 1.16
TNFRSF1A-205ENST00000534885 TBX2Q13207 712 aaPredicted RBP22.31■■□□□ 1.16
TNFRSF1A-205ENST00000534885 KIF22Q14807 665 aa22.31■■□□□ 1.16
TNFRSF1A-205ENST00000534885 NFIL3Q16649 462 aa22.31■■□□□ 1.16
TNFRSF1A-205ENST00000534885 MAN2A1Q16706 1144 aa22.31■■□□□ 1.16
TNFRSF1A-205ENST00000534885 ARMCX5Q6P1M9 558 aa22.31■■□□□ 1.16
TNFRSF1A-205ENST00000534885 MAP4K3Q8IVH8 894 aa22.31■■□□□ 1.16
TNFRSF1A-205ENST00000534885 ZNF215Q9UL58 517 aaPredicted RBP22.31■■□□□ 1.16
TNFRSF1A-205ENST00000534885 IGKV6-21A0A0C4DH24 114 aa22.3■■□□□ 1.16
TNFRSF1A-205ENST00000534885 TPM2P07951 284 aa22.3■■□□□ 1.16
TNFRSF1A-205ENST00000534885 IGBP1P78318 339 aa22.3■■□□□ 1.16
TNFRSF1A-205ENST00000534885 VWA3BQ502W6 1294 aa22.3■■□□□ 1.16
TNFRSF1A-205ENST00000534885 TAS1R3Q7RTX0 852 aa22.3■■□□□ 1.16
TNFRSF1A-205ENST00000534885 LRRC8AQ8IWT6 810 aa22.3■■□□□ 1.16
TNFRSF1A-205ENST00000534885 NDST4Q9H3R1 872 aa22.3■■□□□ 1.16
TNFRSF1A-205ENST00000534885 LRRIQ4A6NIV6 560 aa22.3■■□□□ 1.16
TNFRSF1A-205ENST00000534885 NAMPTP43490 491 aa22.3■■□□□ 1.16
TNFRSF1A-205ENST00000534885 DNM2P50570 870 aa22.3■■□□□ 1.16
TNFRSF1A-205ENST00000534885 CYP2J2P51589 502 aa22.3■■□□□ 1.16
TNFRSF1A-205ENST00000534885 GSDMDP57764 484 aa22.3■■□□□ 1.16
TNFRSF1A-205ENST00000534885 GOLGA8FQ08AF8 430 aa22.3■■□□□ 1.16
TNFRSF1A-205ENST00000534885 GOLGA8DPQ0D2H9 430 aa22.3■■□□□ 1.16
TNFRSF1A-205ENST00000534885 TRIM59Q8IWR1 403 aa22.3■■□□□ 1.16
TNFRSF1A-205ENST00000534885 CD99L2Q8TCZ2 262 aa22.3■■□□□ 1.16
TNFRSF1A-205ENST00000534885 PRPF31Q8WWY3 499 aaKnown RBP22.3■■□□□ 1.16
TNFRSF1A-205ENST00000534885 ZKSCAN5Q9Y2L8 839 aa22.3■■□□□ 1.16
TNFRSF1A-205ENST00000534885 CYBAP13498 195 aa22.29■■□□□ 1.16
TNFRSF1A-205ENST00000534885 TRIM32Q13049 653 aa22.29■■□□□ 1.16
TNFRSF1A-205ENST00000534885 CAPSQ13938 189 aa22.29■■□□□ 1.16
TNFRSF1A-205ENST00000534885 MFSD14CQ5VZR4 134 aa22.29■■□□□ 1.16
TNFRSF1A-205ENST00000534885 GOLGA5Q8TBA6 731 aa22.29■■□□□ 1.16
TNFRSF1A-205ENST00000534885 HVCN1Q96D96 273 aa22.29■■□□□ 1.16
TNFRSF1A-205ENST00000534885 DMAC2Q9NW81 257 aa22.29■■□□□ 1.16
TNFRSF1A-205ENST00000534885 PPP2R5AQ15172 486 aa22.29■■□□□ 1.16
TNFRSF1A-205ENST00000534885 ZSCAN30Q86W11 494 aa22.29■■□□□ 1.16
TNFRSF1A-205ENST00000534885 CBWD1Q9BRT8 395 aa22.29■■□□□ 1.16
TNFRSF1A-205ENST00000534885 KAT6AQ92794 2004 aa22.28■■□□□ 1.16
TNFRSF1A-205ENST00000534885 GAS2O43903 313 aaKnown RBP22.28■■□□□ 1.16
TNFRSF1A-205ENST00000534885 C22orf31O95567 290 aa22.28■■□□□ 1.16
TNFRSF1A-205ENST00000534885 AKR1A1P14550 325 aa22.28■■□□□ 1.16
TNFRSF1A-205ENST00000534885 ZNF484Q5JVG2 852 aa22.28■■□□□ 1.16
TNFRSF1A-205ENST00000534885 IER5Q5VY09 327 aa22.28■■□□□ 1.16
TNFRSF1A-205ENST00000534885 EXOC8Q8IYI6 725 aa22.28■■□□□ 1.16
TNFRSF1A-205ENST00000534885 BRCA2P51587 3418 aa22.28■■□□□ 1.16
TNFRSF1A-205ENST00000534885 ITIH6Q6UXX5 1313 aa22.28■■□□□ 1.16
TNFRSF1A-205ENST00000534885 THSD7BQ9C0I4 1608 aa22.28■■□□□ 1.16
TNFRSF1A-205ENST00000534885 SIP14410 1827 aa22.28■■□□□ 1.16
TNFRSF1A-205ENST00000534885 ANKRD63C9JTQ0 380 aa22.27■■□□□ 1.16
TNFRSF1A-205ENST00000534885 SLC16A3O15427 465 aaKnown RBP22.27■■□□□ 1.16
TNFRSF1A-205ENST00000534885 CLCN3P51790 818 aa22.27■■□□□ 1.16
TNFRSF1A-205ENST00000534885 BEX3Q00994 111 aa22.27■■□□□ 1.16
TNFRSF1A-205ENST00000534885 EFCAB12Q6NXP0 572 aa22.27■■□□□ 1.16
TNFRSF1A-205ENST00000534885 FRMD5Q7Z6J6 570 aa22.27■■□□□ 1.16
TNFRSF1A-205ENST00000534885 METTL13Q8N6R0 699 aa22.27■■□□□ 1.16
TNFRSF1A-205ENST00000534885 DEPTORQ8TB45 409 aa22.27■■□□□ 1.16
TNFRSF1A-205ENST00000534885 PCIF1Q9H4Z3 704 aa22.27■■□□□ 1.16
TNFRSF1A-205ENST00000534885 ARMCX3Q9UH62 379 aaPredicted RBP22.27■■□□□ 1.16
TNFRSF1A-205ENST00000534885 A0A1W2PQC6 194 aa22.27■■□□□ 1.16
TNFRSF1A-205ENST00000534885 GJB1P08034 283 aa22.27■■□□□ 1.16
TNFRSF1A-205ENST00000534885 EPB41P11171 864 aaKnown RBP22.27■■□□□ 1.16
TNFRSF1A-205ENST00000534885 ELNP15502 786 aa22.27■■□□□ 1.16
TNFRSF1A-205ENST00000534885 SLC9A9Q8IVB4 645 aa22.27■■□□□ 1.16
TNFRSF1A-205ENST00000534885 TCP11Q8WWU5 503 aa22.27■■□□□ 1.16
TNFRSF1A-205ENST00000534885 PSPC1Q8WXF1 523 aaKnown RBP22.27■■□□□ 1.16
TNFRSF1A-205ENST00000534885 JPH2Q9BR39 696 aaPredicted RBP22.27■■□□□ 1.16
TNFRSF1A-205ENST00000534885 AP5M1Q9H0R1 490 aa22.27■■□□□ 1.16
TNFRSF1A-205ENST00000534885 EXOC7Q9UPT5 735 aa22.27■■□□□ 1.16
TNFRSF1A-205ENST00000534885 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.27■■□□□ 1.16
TNFRSF1A-205ENST00000534885 ESPNB1AK53 854 aa22.26■■□□□ 1.15
TNFRSF1A-205ENST00000534885 F2P00734 622 aa22.26■■□□□ 1.15
TNFRSF1A-205ENST00000534885 GYPCP04921 128 aa22.26■■□□□ 1.15
TNFRSF1A-205ENST00000534885 SFPQP23246 707 aaKnown RBP eCLIP22.26■■□□□ 1.15
TNFRSF1A-205ENST00000534885 KLRC1P26715 233 aa22.26■■□□□ 1.15
TNFRSF1A-205ENST00000534885 CNGA1P29973 690 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms