RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 DIS3Q9Y2L1 958 aaKnown RBP18.49■□□□□ 0.55
PHRF1-206ENST00000534320 DNAJC8O75937 253 aaPredicted RBP18.49■□□□□ 0.55
PHRF1-206ENST00000534320 TC2NQ8N9U0 490 aa18.49■□□□□ 0.55
PHRF1-206ENST00000534320 SNX25Q9H3E2 840 aa18.49■□□□□ 0.55
PHRF1-206ENST00000534320 SYNJ2BP-COX16A0A087WUM0 186 aa18.49■□□□□ 0.55
PHRF1-206ENST00000534320 CLTAP09496 248 aa18.49■□□□□ 0.55
PHRF1-206ENST00000534320 GPC5P78333 572 aa18.49■□□□□ 0.55
PHRF1-206ENST00000534320 CHP1Q99653 195 aa18.49■□□□□ 0.55
PHRF1-206ENST00000534320 COX16Q9P0S2 106 aa18.49■□□□□ 0.55
PHRF1-206ENST00000534320 HDAC6Q9UBN7 1215 aa18.49■□□□□ 0.55
PHRF1-206ENST00000534320 NFU1Q9UMS0 254 aa18.49■□□□□ 0.55
PHRF1-206ENST00000534320 CD2APQ9Y5K6 639 aa18.49■□□□□ 0.55
PHRF1-206ENST00000534320 FRMD3A2A2Y4 597 aa18.49■□□□□ 0.55
PHRF1-206ENST00000534320 MIF4GDA9UHW6 222 aaKnown RBP18.49■□□□□ 0.55
PHRF1-206ENST00000534320 PPP1R3GB7ZBB8 358 aa18.49■□□□□ 0.55
PHRF1-206ENST00000534320 ALS2CLQ60I27 953 aa18.49■□□□□ 0.55
PHRF1-206ENST00000534320 NME8Q8N427 588 aa18.49■□□□□ 0.55
PHRF1-206ENST00000534320 IFT122Q9HBG6 1241 aa18.49■□□□□ 0.55
PHRF1-206ENST00000534320 ANAPC5Q9UJX4 755 aa18.49■□□□□ 0.55
PHRF1-206ENST00000534320 SCINQ9Y6U3 715 aa18.49■□□□□ 0.55
PHRF1-206ENST00000534320 OSBPL9Q96SU4 736 aa18.48■□□□□ 0.55
PHRF1-206ENST00000534320 POLR3FQ9H1D9 316 aaPredicted RBP18.48■□□□□ 0.55
PHRF1-206ENST00000534320 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.48■□□□□ 0.55
PHRF1-206ENST00000534320 CNOT8Q9UFF9 292 aaKnown RBP18.48■□□□□ 0.55
PHRF1-206ENST00000534320 CNOT7Q9UIV1 285 aaKnown RBP18.48■□□□□ 0.55
PHRF1-206ENST00000534320 TROVE2P10155 538 aaKnown RBP eCLIP18.48■□□□□ 0.55
PHRF1-206ENST00000534320 CUL1Q13616 776 aa18.48■□□□□ 0.55
PHRF1-206ENST00000534320 Q3C1V9 767 aa18.48■□□□□ 0.55
PHRF1-206ENST00000534320 FAM149B1Q96BN6 582 aa18.48■□□□□ 0.55
PHRF1-206ENST00000534320 SAAL1Q96ER3 474 aa18.48■□□□□ 0.55
PHRF1-206ENST00000534320 HMGB1P1B2RPK0 211 aaPredicted RBP18.48■□□□□ 0.55
PHRF1-206ENST00000534320 YWHABP31946 246 aaKnown RBP18.48■□□□□ 0.55
PHRF1-206ENST00000534320 KRT39Q6A163 491 aa18.48■□□□□ 0.55
PHRF1-206ENST00000534320 NFRKBQ6P4R8 1299 aa18.48■□□□□ 0.55
PHRF1-206ENST00000534320 VGLL2Q8N8G2 317 aa18.48■□□□□ 0.55
PHRF1-206ENST00000534320 RGL2O15211 777 aa18.48■□□□□ 0.55
PHRF1-206ENST00000534320 CC2D1AQ6P1N0 951 aaPredicted RBP18.48■□□□□ 0.55
PHRF1-206ENST00000534320 C7orf31Q8N865 590 aa18.48■□□□□ 0.55
PHRF1-206ENST00000534320 SLC4A9Q96Q91 983 aa18.48■□□□□ 0.55
PHRF1-206ENST00000534320 FMO2Q99518 471 aa18.48■□□□□ 0.55
PHRF1-206ENST00000534320 SEPT10Q9P0V9 454 aa18.48■□□□□ 0.55
PHRF1-206ENST00000534320 RFX1P22670 979 aa18.47■□□□□ 0.55
PHRF1-206ENST00000534320 PSPC1Q8WXF1 523 aaKnown RBP18.47■□□□□ 0.55
PHRF1-206ENST00000534320 SLC16A3O15427 465 aaKnown RBP18.47■□□□□ 0.55
PHRF1-206ENST00000534320 NCK2O43639 380 aa18.47■□□□□ 0.55
PHRF1-206ENST00000534320 IFRD2Q12894 506 aaPredicted RBP18.47■□□□□ 0.55
PHRF1-206ENST00000534320 ZNF667Q5HYK9 610 aa18.47■□□□□ 0.55
PHRF1-206ENST00000534320 FUCA2Q9BTY2 467 aa18.47■□□□□ 0.55
PHRF1-206ENST00000534320 ADAM22Q9P0K1 906 aa18.47■□□□□ 0.55
PHRF1-206ENST00000534320 SLC9A2Q9UBY0 812 aa18.47■□□□□ 0.55
PHRF1-206ENST00000534320 EMSYQ7Z589 1322 aa18.47■□□□□ 0.55
PHRF1-206ENST00000534320 GEN1Q17RS7 908 aa18.47■□□□□ 0.55
PHRF1-206ENST00000534320 OR6B2Q6IFH4 312 aa18.47■□□□□ 0.55
PHRF1-206ENST00000534320 ERICH1Q86X53 443 aa18.47■□□□□ 0.55
PHRF1-206ENST00000534320 OTUD5Q96G74 571 aa18.47■□□□□ 0.55
PHRF1-206ENST00000534320 HEXIM2Q96MH2 286 aaKnown RBP18.47■□□□□ 0.55
PHRF1-206ENST00000534320 ANAPC7Q9UJX3 599 aa18.47■□□□□ 0.55
PHRF1-206ENST00000534320 DYNLT1P63172 113 aa18.47■□□□□ 0.55
PHRF1-206ENST00000534320 COG2Q14746 738 aa18.47■□□□□ 0.55
PHRF1-206ENST00000534320 COL23A1Q86Y22 540 aaPredicted RBP18.47■□□□□ 0.55
PHRF1-206ENST00000534320 IRX2Q9BZI1 471 aaPredicted RBP18.47■□□□□ 0.55
PHRF1-206ENST00000534320 XAB2Q9HCS7 855 aaKnown RBP18.47■□□□□ 0.55
PHRF1-206ENST00000534320 POC1B-GALNT4F8VUJ3 575 aa18.46■□□□□ 0.55
PHRF1-206ENST00000534320 SLMAPQ14BN4 828 aa18.46■□□□□ 0.55
PHRF1-206ENST00000534320 RASGRP2Q7LDG7 609 aa18.46■□□□□ 0.55
PHRF1-206ENST00000534320 FAM193BQ96PV7 902 aaPredicted RBP18.46■□□□□ 0.55
PHRF1-206ENST00000534320 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.46■□□□□ 0.556e-7■■■■□ 22.1
PHRF1-206ENST00000534320 RPSAP08865 295 aaKnown RBP18.46■□□□□ 0.55
PHRF1-206ENST00000534320 NNTQ13423 1086 aa18.46■□□□□ 0.55
PHRF1-206ENST00000534320 AFAP1L2Q8N4X5 818 aa18.46■□□□□ 0.55
PHRF1-206ENST00000534320 TMEM39BQ9GZU3 492 aa18.46■□□□□ 0.55
PHRF1-206ENST00000534320 SALL1Q9NSC2 1324 aa18.46■□□□□ 0.55
PHRF1-206ENST00000534320 CCT5P48643 541 aa18.46■□□□□ 0.55
PHRF1-206ENST00000534320 YWHAGP61981 247 aaKnown RBP eCLIP18.46■□□□□ 0.554e-6■■■■□ 21.1
PHRF1-206ENST00000534320 NFIAQ12857 509 aa18.46■□□□□ 0.55
PHRF1-206ENST00000534320 CALN1Q9BXU9 219 aa18.46■□□□□ 0.55
PHRF1-206ENST00000534320 AGPAT5Q9NUQ2 364 aa18.46■□□□□ 0.55
PHRF1-206ENST00000534320 RNF181Q9P0P0 153 aa18.46■□□□□ 0.55
PHRF1-206ENST00000534320 SYNGAP1Q96PV0 1343 aa18.46■□□□□ 0.55
PHRF1-206ENST00000534320 MCF2LO15068 1137 aa18.46■□□□□ 0.55
PHRF1-206ENST00000534320 IL1R1P14778 569 aa18.46■□□□□ 0.55
PHRF1-206ENST00000534320 TMCO4Q5TGY1 634 aa18.46■□□□□ 0.55
PHRF1-206ENST00000534320 INTS9Q9NV88 658 aaKnown RBP18.46■□□□□ 0.55
PHRF1-206ENST00000534320 HAUS2Q9NVX0 235 aa18.46■□□□□ 0.55
PHRF1-206ENST00000534320 ATP1A1P05023 1023 aaKnown RBP18.45■□□□□ 0.54
PHRF1-206ENST00000534320 SOX5P35711 763 aa18.45■□□□□ 0.54
PHRF1-206ENST00000534320 BAATQ14032 418 aaPredicted RBP18.45■□□□□ 0.54
PHRF1-206ENST00000534320 ZNF394Q53GI3 561 aa18.45■□□□□ 0.54
PHRF1-206ENST00000534320 ICE2Q659A1 982 aa18.45■□□□□ 0.54
PHRF1-206ENST00000534320 CALR3Q96L12 384 aaKnown RBP18.45■□□□□ 0.54
PHRF1-206ENST00000534320 FAM49AQ9H0Q0 323 aaPredicted RBP18.45■□□□□ 0.54
PHRF1-206ENST00000534320 JPH1Q9HDC5 661 aaPredicted RBP18.45■□□□□ 0.54
PHRF1-206ENST00000534320 MAD1L1Q9Y6D9 718 aa18.45■□□□□ 0.54
PHRF1-206ENST00000534320 RPA1P27694 616 aa18.45■□□□□ 0.54
PHRF1-206ENST00000534320 PKN1Q16512 942 aa18.45■□□□□ 0.54
PHRF1-206ENST00000534320 TMEM270Q6UE05 265 aa18.45■□□□□ 0.54
PHRF1-206ENST00000534320 GLYCTKQ8IVS8 523 aa18.45■□□□□ 0.54
PHRF1-206ENST00000534320 ZDHHC15Q96MV8 337 aa18.45■□□□□ 0.54
PHRF1-206ENST00000534320 NBPF3Q9H094 633 aa18.45■□□□□ 0.54
PHRF1-206ENST00000534320 SPECC1L-ADORA2AF8WAN1 911 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms