RNA–Protein interactions for RNA: ENST00000533889.1

CAPN5-207, Transcript of calpain 5, humanhuman

TSL 3

Gene CAPN5, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN5-207ENST00000533889 NLRP4Q96MN2 994 aa19.66■□□□□ 0.74
CAPN5-207ENST00000533889 CASD1Q96PB1 797 aa19.66■□□□□ 0.74
CAPN5-207ENST00000533889 TLE6Q9H808 572 aa19.66■□□□□ 0.74
CAPN5-207ENST00000533889 TLR9Q9NR96 1032 aa19.66■□□□□ 0.74
CAPN5-207ENST00000533889 CHST12Q9NRB3 414 aa19.66■□□□□ 0.74
CAPN5-207ENST00000533889 PCDHGC5Q9Y5F6 944 aa19.66■□□□□ 0.74
CAPN5-207ENST00000533889 TBX10O75333 385 aa19.65■□□□□ 0.74
CAPN5-207ENST00000533889 EOMESO95936 686 aa19.65■□□□□ 0.74
CAPN5-207ENST00000533889 FOSBP53539 338 aa19.65■□□□□ 0.74
CAPN5-207ENST00000533889 POLGP54098 1239 aaPredicted RBP19.65■□□□□ 0.74
CAPN5-207ENST00000533889 ZNF410Q86VK4 478 aa19.65■□□□□ 0.74
CAPN5-207ENST00000533889 KSR1Q8IVT5 923 aa19.65■□□□□ 0.74
CAPN5-207ENST00000533889 EXOC8Q8IYI6 725 aa19.65■□□□□ 0.74
CAPN5-207ENST00000533889 LRRC43Q8N309 656 aa19.65■□□□□ 0.74
CAPN5-207ENST00000533889 EFHBQ8N7U6 833 aa19.65■□□□□ 0.74
CAPN5-207ENST00000533889 NSUN7Q8NE18 718 aaKnown RBP19.65■□□□□ 0.74
CAPN5-207ENST00000533889 RNF19AQ9NV58 838 aa19.65■□□□□ 0.74
CAPN5-207ENST00000533889 PUF60Q9UHX1 559 aaKnown RBP19.65■□□□□ 0.74
CAPN5-207ENST00000533889 CD207Q9UJ71 328 aa19.65■□□□□ 0.74
CAPN5-207ENST00000533889 PLXNA4Q9HCM2 1894 aa19.65■□□□□ 0.74
CAPN5-207ENST00000533889 SEC24BO95487 1268 aa19.64■□□□□ 0.73
CAPN5-207ENST00000533889 TWF2Q6IBS0 349 aaKnown RBP19.64■□□□□ 0.73
CAPN5-207ENST00000533889 LRRC55Q6ZSA7 311 aa19.64■□□□□ 0.73
CAPN5-207ENST00000533889 OTUD6AQ7L8S5 288 aa19.64■□□□□ 0.73
CAPN5-207ENST00000533889 CATSPER4Q7RTX7 472 aa19.64■□□□□ 0.73
CAPN5-207ENST00000533889 ZNF579Q8NAF0 562 aaKnown RBP19.64■□□□□ 0.73
CAPN5-207ENST00000533889 HELQQ8TDG4 1101 aa19.64■□□□□ 0.73
CAPN5-207ENST00000533889 ZNF558Q96NG5 402 aa19.64■□□□□ 0.73
CAPN5-207ENST00000533889 LXNQ9BS40 222 aa19.64■□□□□ 0.73
CAPN5-207ENST00000533889 RGL1Q9NZL6 768 aa19.64■□□□□ 0.73
CAPN5-207ENST00000533889 WRAP73Q9P2S5 460 aaPredicted RBP19.64■□□□□ 0.73
CAPN5-207ENST00000533889 PRKAG3Q9UGI9 489 aa19.64■□□□□ 0.73
CAPN5-207ENST00000533889 BTBD18B2RXH4 712 aa19.63■□□□□ 0.73
CAPN5-207ENST00000533889 PI4K2BG5E9Z4 385 aa19.63■□□□□ 0.73
CAPN5-207ENST00000533889 PER2O15055 1255 aa19.63■□□□□ 0.73
CAPN5-207ENST00000533889 MBTPS2O43462 519 aa19.63■□□□□ 0.73
CAPN5-207ENST00000533889 JAK2O60674 1132 aa19.63■□□□□ 0.73
CAPN5-207ENST00000533889 YWHABP31946 246 aaKnown RBP19.63■□□□□ 0.73
CAPN5-207ENST00000533889 ERVFC1P60507 584 aa19.63■□□□□ 0.73
CAPN5-207ENST00000533889 KRT17Q04695 432 aa19.63■□□□□ 0.73
CAPN5-207ENST00000533889 CTTNQ14247 550 aaKnown RBP19.63■□□□□ 0.73
CAPN5-207ENST00000533889 TMEM31Q5JXX7 168 aa19.63■□□□□ 0.73
CAPN5-207ENST00000533889 CLLU1OSQ5K130 101 aa19.63■□□□□ 0.73
CAPN5-207ENST00000533889 PDE12Q6L8Q7 609 aaKnown RBP19.63■□□□□ 0.73
CAPN5-207ENST00000533889 KCNT2Q6UVM3 1135 aa19.63■□□□□ 0.73
CAPN5-207ENST00000533889 TPH2Q8IWU9 490 aa19.63■□□□□ 0.73
CAPN5-207ENST00000533889 C4orf19Q8IY42 314 aa19.63■□□□□ 0.73
CAPN5-207ENST00000533889 TNFRSF25Q93038 417 aa19.63■□□□□ 0.73
CAPN5-207ENST00000533889 DYDC2Q96IM9 177 aa19.63■□□□□ 0.73
CAPN5-207ENST00000533889 ZSWIM4Q9H7M6 989 aa19.63■□□□□ 0.73
CAPN5-207ENST00000533889 BMP2KQ9NSY1 1161 aaPredicted RBP19.63■□□□□ 0.73
CAPN5-207ENST00000533889 RAPGEFL1Q9UHV5 662 aa19.63■□□□□ 0.73
CAPN5-207ENST00000533889 PCDHA12Q9UN75 941 aa19.63■□□□□ 0.73
CAPN5-207ENST00000533889 PIN4Q9Y237 131 aaKnown RBP19.63■□□□□ 0.73
CAPN5-207ENST00000533889 PPME1Q9Y570 386 aa19.63■□□□□ 0.73
CAPN5-207ENST00000533889 COL4A3BPQ9Y5P4 624 aa19.63■□□□□ 0.73
CAPN5-207ENST00000533889 CENPBP07199 599 aaPredicted RBP19.62■□□□□ 0.73
CAPN5-207ENST00000533889 SRGAP2CP0DJJ0 459 aa19.62■□□□□ 0.73
CAPN5-207ENST00000533889 SKIP12755 728 aa19.62■□□□□ 0.73
CAPN5-207ENST00000533889 PBX3P40426 434 aa19.62■□□□□ 0.73
CAPN5-207ENST00000533889 RFC5P40937 340 aa19.62■□□□□ 0.73
CAPN5-207ENST00000533889 PHKA2P46019 1235 aa19.62■□□□□ 0.73
CAPN5-207ENST00000533889 PLCB3Q01970 1234 aa19.62■□□□□ 0.73
CAPN5-207ENST00000533889 CYP4A11Q02928 519 aa19.62■□□□□ 0.73
CAPN5-207ENST00000533889 ZP2Q05996 745 aa19.62■□□□□ 0.73
CAPN5-207ENST00000533889 SMAD4Q13485 552 aaKnown RBP19.62■□□□□ 0.73
CAPN5-207ENST00000533889 SMAD2Q15796 467 aaKnown RBP19.62■□□□□ 0.73
CAPN5-207ENST00000533889 CALCRLQ16602 461 aa19.62■□□□□ 0.73
CAPN5-207ENST00000533889 XKR9Q5GH70 373 aa19.62■□□□□ 0.73
CAPN5-207ENST00000533889 ZNF598Q86UK7 904 aaKnown RBP19.62■□□□□ 0.73
CAPN5-207ENST00000533889 ADHFE1Q8IWW8 467 aa19.62■□□□□ 0.73
CAPN5-207ENST00000533889 DIS3L2Q8IYB7 885 aaKnown RBP19.62■□□□□ 0.73
CAPN5-207ENST00000533889 PRPF31Q8WWY3 499 aaKnown RBP19.62■□□□□ 0.73
CAPN5-207ENST00000533889 MRPS27Q92552 414 aaKnown RBP19.62■□□□□ 0.73
CAPN5-207ENST00000533889 TMEM143Q96AN5 459 aa19.62■□□□□ 0.73
CAPN5-207ENST00000533889 LRFN3Q9BTN0 628 aa19.62■□□□□ 0.73
CAPN5-207ENST00000533889 SPG21Q9NZD8 308 aa19.62■□□□□ 0.73
CAPN5-207ENST00000533889 LZTS1Q9Y250 596 aa19.62■□□□□ 0.73
CAPN5-207ENST00000533889 ALADP13716 330 aa19.61■□□□□ 0.73
CAPN5-207ENST00000533889 PPM1AP35813 382 aa19.61■□□□□ 0.73
CAPN5-207ENST00000533889 SPIRE1Q08AE8 756 aa19.61■□□□□ 0.73
CAPN5-207ENST00000533889 LONRF3Q496Y0 759 aa19.61■□□□□ 0.73
CAPN5-207ENST00000533889 PSPC1Q8WXF1 523 aaKnown RBP19.61■□□□□ 0.73
CAPN5-207ENST00000533889 MSLNLQ96KJ4 702 aa19.61■□□□□ 0.73
CAPN5-207ENST00000533889 MRPL9Q9BYD2 267 aaKnown RBP19.61■□□□□ 0.73
CAPN5-207ENST00000533889 DHX33Q9H6R0 707 aaKnown RBP19.61■□□□□ 0.73
CAPN5-207ENST00000533889 ENTPD7Q9NQZ7 604 aa19.61■□□□□ 0.73
CAPN5-207ENST00000533889 CLEC1BQ9P126 229 aa19.61■□□□□ 0.73
CAPN5-207ENST00000533889 FAM86C2PA6NEL3 165 aa19.6■□□□□ 0.73
CAPN5-207ENST00000533889 ZBTB39O15060 712 aa19.6■□□□□ 0.73
CAPN5-207ENST00000533889 SLITRK3O94933 977 aa19.6■□□□□ 0.73
CAPN5-207ENST00000533889 ATF7P17544 494 aaPredicted RBP19.6■□□□□ 0.73
CAPN5-207ENST00000533889 TXKP42681 527 aa19.6■□□□□ 0.73
CAPN5-207ENST00000533889 SAFBQ15424 915 aaKnown RBP eCLIP19.6■□□□□ 0.73
CAPN5-207ENST00000533889 PLPP4Q5VZY2 271 aa19.6■□□□□ 0.73
CAPN5-207ENST00000533889 TCP11Q8WWU5 503 aa19.6■□□□□ 0.73
CAPN5-207ENST00000533889 LPPQ93052 612 aa19.6■□□□□ 0.73
CAPN5-207ENST00000533889 POP1Q99575 1024 aaKnown RBP19.6■□□□□ 0.73
CAPN5-207ENST00000533889 TCF25Q9BQ70 676 aa19.6■□□□□ 0.73
CAPN5-207ENST00000533889 EIF2AK1Q9BQI3 630 aaKnown RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms