RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, human

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-222	ENST00000533733	ITGB5	P18084	799 aa		13	□□□□□ -0.33
ATM-222	ENST00000533733	SCP2	P22307	547 aa		13	□□□□□ -0.33
ATM-222	ENST00000533733	MATR3	P43243	847 aa	Known RBP eCLIP	13	□□□□□ -0.33
ATM-222	ENST00000533733	RARRES1	P49788	294 aa		13	□□□□□ -0.33
ATM-222	ENST00000533733	GTF2B	Q00403	316 aa		13	□□□□□ -0.33
ATM-222	ENST00000533733	MTMR1	Q13613	665 aa		13	□□□□□ -0.33
ATM-222	ENST00000533733	RASA3	Q14644	834 aa		13	□□□□□ -0.33
ATM-222	ENST00000533733	KIF22	Q14807	665 aa		13	□□□□□ -0.33
ATM-222	ENST00000533733	DRAP1	Q14919	205 aa	Predicted RBP	13	□□□□□ -0.33
ATM-222	ENST00000533733	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	13	□□□□□ -0.33
ATM-222	ENST00000533733	RHOT2	Q8IXI1	618 aa		13	□□□□□ -0.33
ATM-222	ENST00000533733	FAM76A	Q8TAV0	307 aa		13	□□□□□ -0.33
ATM-222	ENST00000533733	SCFD2	Q8WU76	684 aa		13	□□□□□ -0.33
ATM-222	ENST00000533733	CLEC4D	Q8WXI8	215 aa		13	□□□□□ -0.33
ATM-222	ENST00000533733	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	13	□□□□□ -0.33
ATM-222	ENST00000533733	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13	□□□□□ -0.33
ATM-222	ENST00000533733	PACSIN1	Q9BY11	444 aa		13	□□□□□ -0.33
ATM-222	ENST00000533733	SLITRK6	Q9H5Y7	841 aa		13	□□□□□ -0.33
ATM-222	ENST00000533733	MYOZ2	Q9NPC6	264 aa		13	□□□□□ -0.33
ATM-222	ENST00000533733	ZNF277	Q9NRM2	450 aa	Predicted RBP	13	□□□□□ -0.33
ATM-222	ENST00000533733	AMFR	Q9UKV5	643 aa		13	□□□□□ -0.33
ATM-222	ENST00000533733	ZHX2	Q9Y6X8	837 aa		13	□□□□□ -0.33
ATM-222	ENST00000533733	ANKRD62	A6NC57	917 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	PHF20L1	A8MW92	1017 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	WDR64	B1ANS9	1081 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	DDX3X	O00571	662 aa	Known RBP eCLIP	12.99	□□□□□ -0.33
ATM-222	ENST00000533733	KCNK3	O14649	394 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	GGCX	P38435	758 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	CYP2J2	P51589	502 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	ZNF280A	P59817	542 aa	Predicted RBP	12.99	□□□□□ -0.33
ATM-222	ENST00000533733	TGFB2	P61812	414 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	PSMC5	P62195	406 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	EZH2	Q15910	746 aa	Known RBP	12.99	□□□□□ -0.33
ATM-222	ENST00000533733	MIGA2	Q7L4E1	593 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	CD302	Q8IX05	232 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	XXYLT1	Q8NBI6	393 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	BANK1	Q8NDB2	785 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	MORC4	Q8TE76	937 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	FAM81B	Q96LP2	452 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	SYT11	Q9BT88	431 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	FBXO28	Q9NVF7	368 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	WRAP73	Q9P2S5	460 aa	Predicted RBP	12.99	□□□□□ -0.33
ATM-222	ENST00000533733	PPP1R9A	Q9ULJ8	1098 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	STXBP5L	Q9Y2K9	1186 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	GOLGA6C	A6NDK9	693 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	ZMYND10	O75800	440 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	GOLGA6D	P0CG33	693 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	TNFAIP3	P21580	790 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	INPP5B	P32019	993 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	SMTN	P53814	917 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	OAZ1	P54368	228 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	NCKAP1L	P55160	1127 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	UBXN2A	P68543	259 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	CXCL9	Q07325	125 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	ZYX	Q15942	572 aa	Known RBP	12.99	□□□□□ -0.33
ATM-222	ENST00000533733	ENOX2	Q16206	610 aa	Known RBP	12.99	□□□□□ -0.33
ATM-222	ENST00000533733	MAATS1	Q7Z4T9	603 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	DAW1	Q8N136	415 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	CCDC26	Q8TAB7	109 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	SYTL5	Q8TDW5	730 aa	Predicted RBP	12.99	□□□□□ -0.33
ATM-222	ENST00000533733	U2AF1L4	Q8WU68	220 aa	Known RBP	12.99	□□□□□ -0.33
ATM-222	ENST00000533733	JDP2	Q8WYK2	163 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	AGBL1	Q96MI9	1066 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	PSMB7	Q99436	277 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	SENP7	Q9BQF6	1050 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	ISCU	Q9H1K1	167 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	AS3MT	Q9HBK9	375 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	GOLGA6A	Q9NYA3	693 aa		12.99	□□□□□ -0.33
ATM-222	ENST00000533733	RGS17	Q9UGC6	210 aa	Predicted RBP	12.99	□□□□□ -0.33
ATM-222	ENST00000533733	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.99	□□□□□ -0.33
ATM-222	ENST00000533733	PHIP	Q8WWQ0	1821 aa		12.98	□□□□□ -0.33
ATM-222	ENST00000533733		H0YCG3	227 aa		12.98	□□□□□ -0.33
ATM-222	ENST00000533733	AGPS	O00116	658 aa		12.98	□□□□□ -0.33
ATM-222	ENST00000533733	HSPA6	P17066	643 aa		12.98	□□□□□ -0.33
ATM-222	ENST00000533733	KCNA3	P22001	575 aa		12.98	□□□□□ -0.33
ATM-222	ENST00000533733	YWHAB	P31946	246 aa	Known RBP	12.98	□□□□□ -0.33
ATM-222	ENST00000533733	VAMP7	P51809	220 aa		12.98	□□□□□ -0.33
ATM-222	ENST00000533733	GALC	P54803	685 aa		12.98	□□□□□ -0.33
ATM-222	ENST00000533733	DCAF15	Q66K64	600 aa		12.98	□□□□□ -0.33
ATM-222	ENST00000533733	ZNF746	Q6NUN9	644 aa	Predicted RBP	12.98	□□□□□ -0.33
ATM-222	ENST00000533733	LRRC45	Q96CN5	670 aa		12.98	□□□□□ -0.33
ATM-222	ENST00000533733	GPRASP2	Q96D09	838 aa		12.98	□□□□□ -0.33
ATM-222	ENST00000533733	HES6	Q96HZ4	224 aa		12.98	□□□□□ -0.33
ATM-222	ENST00000533733	MS4A14	Q96JA4	679 aa		12.98	□□□□□ -0.33
ATM-222	ENST00000533733	KRT12	Q99456	494 aa		12.98	□□□□□ -0.33
ATM-222	ENST00000533733	CARD9	Q9H257	536 aa		12.98	□□□□□ -0.33
ATM-222	ENST00000533733	TAF1D	Q9H5J8	278 aa	Predicted RBP	12.98	□□□□□ -0.33
ATM-222	ENST00000533733	KIAA1217	Q5T5P2	1943 aa		12.98	□□□□□ -0.33
ATM-222	ENST00000533733	MIF4GD	A9UHW6	222 aa	Known RBP	12.97	□□□□□ -0.33
ATM-222	ENST00000533733	BHMG1	C9JSJ3	638 aa	Predicted RBP	12.97	□□□□□ -0.33
ATM-222	ENST00000533733	NFIB	O00712	420 aa		12.97	□□□□□ -0.33
ATM-222	ENST00000533733	SHOX2	O60902	331 aa	Predicted RBP	12.97	□□□□□ -0.33
ATM-222	ENST00000533733	STAM2	O75886	525 aa		12.97	□□□□□ -0.33
ATM-222	ENST00000533733	ALAS1	P13196	640 aa		12.97	□□□□□ -0.33
ATM-222	ENST00000533733	DPEP1	P16444	411 aa		12.97	□□□□□ -0.33
ATM-222	ENST00000533733	HNRNPH2	P55795	449 aa	Known RBP	12.97	□□□□□ -0.33
ATM-222	ENST00000533733	PGM5	Q15124	567 aa		12.97	□□□□□ -0.33
ATM-222	ENST00000533733	CBWD6	Q4V339	395 aa		12.97	□□□□□ -0.33
ATM-222	ENST00000533733	CBWD3	Q5JTY5	395 aa		12.97	□□□□□ -0.33
ATM-222	ENST00000533733	CBWD5	Q5RIA9	395 aa		12.97	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms