RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 CWH43Q9H720 699 aa9.81□□□□□ -0.84
COPB1-210ENST00000533533 ATP6V0A4Q9HBG4 840 aa9.81□□□□□ -0.84
COPB1-210ENST00000533533 TMEM161AQ9NX61 479 aa9.81□□□□□ -0.84
COPB1-210ENST00000533533 TCEAL9Q9UHQ7 104 aa9.81□□□□□ -0.84
COPB1-210ENST00000533533 LZTS1Q9Y250 596 aa9.81□□□□□ -0.84
COPB1-210ENST00000533533 FAM86B1E9PN63 330 aa9.8□□□□□ -0.84
COPB1-210ENST00000533533 IPO5O00410 1097 aaKnown RBP9.8□□□□□ -0.84
COPB1-210ENST00000533533 GPR32O75388 356 aa9.8□□□□□ -0.84
COPB1-210ENST00000533533 C22orf31O95567 290 aa9.8□□□□□ -0.84
COPB1-210ENST00000533533 FAM86B2P0C5J1 330 aa9.8□□□□□ -0.84
COPB1-210ENST00000533533 SRGAP2BP0DMP2 458 aa9.8□□□□□ -0.84
COPB1-210ENST00000533533 ATP4AP20648 1035 aa9.8□□□□□ -0.84
COPB1-210ENST00000533533 PLCB3Q01970 1234 aa9.8□□□□□ -0.84
COPB1-210ENST00000533533 NR5A1Q13285 461 aa9.8□□□□□ -0.84
COPB1-210ENST00000533533 DSC3Q14574 896 aa9.8□□□□□ -0.84
COPB1-210ENST00000533533 LETM2Q2VYF4 491 aa9.8□□□□□ -0.84
COPB1-210ENST00000533533 PLPP4Q5VZY2 271 aa9.8□□□□□ -0.84
COPB1-210ENST00000533533 ANKRD54Q6NXT1 300 aa9.8□□□□□ -0.84
COPB1-210ENST00000533533 PIK3AP1Q6ZUJ8 805 aa9.8□□□□□ -0.84
COPB1-210ENST00000533533 CKAP2LQ8IYA6 745 aa9.8□□□□□ -0.84
COPB1-210ENST00000533533 FAM177A1Q8N128 213 aaPredicted RBP9.8□□□□□ -0.84
COPB1-210ENST00000533533 METTL13Q8N6R0 699 aa9.8□□□□□ -0.84
COPB1-210ENST00000533533 DAGLBQ8NCG7 672 aa9.8□□□□□ -0.84
COPB1-210ENST00000533533 OXER1Q8TDS5 423 aa9.8□□□□□ -0.84
COPB1-210ENST00000533533 BBXQ8WY36 941 aaPredicted RBP9.8□□□□□ -0.84
COPB1-210ENST00000533533 MRPS27Q92552 414 aaKnown RBP9.8□□□□□ -0.84
COPB1-210ENST00000533533 ASIC4Q96FT7 647 aa9.8□□□□□ -0.84
COPB1-210ENST00000533533 PPP1R16BQ96T49 567 aa9.8□□□□□ -0.84
COPB1-210ENST00000533533 OSMRQ99650 979 aa9.8□□□□□ -0.84
COPB1-210ENST00000533533 ZNF577Q9BSK1 485 aa9.8□□□□□ -0.84
COPB1-210ENST00000533533 TMEM117Q9H0C3 514 aa9.8□□□□□ -0.84
COPB1-210ENST00000533533 ELAC1Q9H777 363 aaKnown RBP9.8□□□□□ -0.84
COPB1-210ENST00000533533 PUF60Q9UHX1 559 aaKnown RBP9.8□□□□□ -0.84
COPB1-210ENST00000533533 SMC3Q9UQE7 1217 aa9.8□□□□□ -0.84
COPB1-210ENST00000533533 KIF3AQ9Y496 699 aa9.8□□□□□ -0.84
COPB1-210ENST00000533533 MAFBQ9Y5Q3 323 aaPredicted RBP9.8□□□□□ -0.84
COPB1-210ENST00000533533 IGLV3-22A0A075B6J6 115 aa9.79□□□□□ -0.84
COPB1-210ENST00000533533 HIDE1A8MVS5 230 aa9.79□□□□□ -0.84
COPB1-210ENST00000533533 HOXA2O43364 376 aa9.79□□□□□ -0.84
COPB1-210ENST00000533533 MARCH6O60337 910 aa9.79□□□□□ -0.84
COPB1-210ENST00000533533 VTNP04004 478 aa9.79□□□□□ -0.84
COPB1-210ENST00000533533 CYP3A4P08684 503 aa9.79□□□□□ -0.84
COPB1-210ENST00000533533 HOXB8P17481 243 aaPredicted RBP9.79□□□□□ -0.84
COPB1-210ENST00000533533 ATP2B1P20020 1258 aa9.79□□□□□ -0.84
COPB1-210ENST00000533533 TECP42680 631 aa9.79□□□□□ -0.84
COPB1-210ENST00000533533 VCPP55072 806 aaKnown RBP9.79□□□□□ -0.84
COPB1-210ENST00000533533 SETQ01105 290 aaPredicted RBP9.79□□□□□ -0.84
COPB1-210ENST00000533533 NPY5RQ15761 445 aa9.79□□□□□ -0.84
COPB1-210ENST00000533533 PTPN21Q16825 1174 aa9.79□□□□□ -0.84
COPB1-210ENST00000533533 ZNF746Q6NUN9 644 aaPredicted RBP9.79□□□□□ -0.84
COPB1-210ENST00000533533 SYCE2Q6PIF2 218 aa9.79□□□□□ -0.84
COPB1-210ENST00000533533 KCNT2Q6UVM3 1135 aa9.79□□□□□ -0.84
COPB1-210ENST00000533533 LRRC55Q6ZSA7 311 aa9.79□□□□□ -0.84
COPB1-210ENST00000533533 DIS3L2Q8IYB7 885 aaKnown RBP9.79□□□□□ -0.84
COPB1-210ENST00000533533 CRYGNQ8WXF5 182 aa9.79□□□□□ -0.84
COPB1-210ENST00000533533 CASD1Q96PB1 797 aa9.79□□□□□ -0.84
COPB1-210ENST00000533533 TCF25Q9BQ70 676 aa9.79□□□□□ -0.84
COPB1-210ENST00000533533 NGRNQ9NPE2 291 aaKnown RBP9.79□□□□□ -0.84
COPB1-210ENST00000533533 ENTPD7Q9NQZ7 604 aa9.79□□□□□ -0.84
COPB1-210ENST00000533533 TBC1D22BQ9NU19 505 aa9.79□□□□□ -0.84
COPB1-210ENST00000533533 DMDP11532 3685 aa9.78□□□□□ -0.84
COPB1-210ENST00000533533 ZNF292O60281 2723 aa9.78□□□□□ -0.84
COPB1-210ENST00000533533 BTBD18B2RXH4 712 aa9.78□□□□□ -0.84
COPB1-210ENST00000533533 M0R2N6 131 aa9.78□□□□□ -0.84
COPB1-210ENST00000533533 MAGEB2O15479 319 aa9.78□□□□□ -0.84
COPB1-210ENST00000533533 CCNT1O60563 726 aaKnown RBP9.78□□□□□ -0.84
COPB1-210ENST00000533533 TDP2O95551 362 aa9.78□□□□□ -0.84
COPB1-210ENST00000533533 GJB2P29033 226 aa9.78□□□□□ -0.84
COPB1-210ENST00000533533 AVPR2P30518 371 aa9.78□□□□□ -0.84
COPB1-210ENST00000533533 PPM1AP35813 382 aa9.78□□□□□ -0.84
COPB1-210ENST00000533533 USP11P51784 963 aa9.78□□□□□ -0.84
COPB1-210ENST00000533533 KRT17Q04695 432 aa9.78□□□□□ -0.84
COPB1-210ENST00000533533 LLGL2Q6P1M3 1020 aa9.78□□□□□ -0.84
COPB1-210ENST00000533533 TRMT1LQ7Z2T5 733 aaKnown RBP9.78□□□□□ -0.84
COPB1-210ENST00000533533 NEK8Q86SG6 692 aa9.78□□□□□ -0.84
COPB1-210ENST00000533533 SMAP1Q8IYB5 467 aaPredicted RBP9.78□□□□□ -0.84
COPB1-210ENST00000533533 ABI1Q8IZP0 508 aa9.78□□□□□ -0.84
COPB1-210ENST00000533533 LRRC43Q8N309 656 aa9.78□□□□□ -0.84
COPB1-210ENST00000533533 ZNF558Q96NG5 402 aa9.78□□□□□ -0.84
COPB1-210ENST00000533533 APOL5Q9BWW9 433 aa9.78□□□□□ -0.84
COPB1-210ENST00000533533 ADAMTS10Q9H324 1103 aa9.78□□□□□ -0.84
COPB1-210ENST00000533533 PLSCR2Q9NRY7 297 aa9.78□□□□□ -0.84
COPB1-210ENST00000533533 RNF19AQ9NV58 838 aa9.78□□□□□ -0.84
COPB1-210ENST00000533533 DDX25Q9UHL0 483 aaKnown RBP9.78□□□□□ -0.84
COPB1-210ENST00000533533 CEP131Q9UPN4 1083 aa9.78□□□□□ -0.84
COPB1-210ENST00000533533 AKT3Q9Y243 479 aa9.78□□□□□ -0.84
COPB1-210ENST00000533533 SAMM50Q9Y512 469 aa9.78□□□□□ -0.84
COPB1-210ENST00000533533 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.78□□□□□ -0.84
COPB1-210ENST00000533533 PCDHA10Q9Y5I2 948 aa9.78□□□□□ -0.84
COPB1-210ENST00000533533 PLXNA3P51805 1871 aa9.77□□□□□ -0.85
COPB1-210ENST00000533533 FAM205CA6NFA0 338 aa9.77□□□□□ -0.85
COPB1-210ENST00000533533 H3BQV1 296 aa9.77□□□□□ -0.85
COPB1-210ENST00000533533 CHMP2AO43633 222 aa9.77□□□□□ -0.85
COPB1-210ENST00000533533 GAS7O60861 476 aa9.77□□□□□ -0.85
COPB1-210ENST00000533533 PSAPP07602 524 aa9.77□□□□□ -0.85
COPB1-210ENST00000533533 ZSCAN20P17040 1043 aaPredicted RBP9.77□□□□□ -0.85
COPB1-210ENST00000533533 SP100P23497 879 aaPredicted RBP9.77□□□□□ -0.85
COPB1-210ENST00000533533 EIF4BP23588 611 aaKnown RBP9.77□□□□□ -0.85
COPB1-210ENST00000533533 TMOD1P28289 359 aa9.77□□□□□ -0.85
COPB1-210ENST00000533533 CIITAP33076 1130 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms