RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 TMCO5BA8MYB1 307 aa16.69■□□□□ 0.26
CACNA1E-208ENST00000533229 HEXIM1O94992 359 aaKnown RBP16.69■□□□□ 0.26
CACNA1E-208ENST00000533229 QARSP47897 775 aaKnown RBP16.69■□□□□ 0.26
CACNA1E-208ENST00000533229 EPHB4P54760 987 aa16.69■□□□□ 0.26
CACNA1E-208ENST00000533229 GUCY2DQ02846 1103 aa16.69■□□□□ 0.26
CACNA1E-208ENST00000533229 PGM5Q15124 567 aa16.69■□□□□ 0.26
CACNA1E-208ENST00000533229 VPS36Q86VN1 386 aa16.69■□□□□ 0.26
CACNA1E-208ENST00000533229 OSGEPQ9NPF4 335 aa16.69■□□□□ 0.26
CACNA1E-208ENST00000533229 GPRC5CQ9NQ84 441 aa16.69■□□□□ 0.26
CACNA1E-208ENST00000533229 DBR1Q9UK59 544 aaKnown RBP16.69■□□□□ 0.26
CACNA1E-208ENST00000533229 FAM153BP0C7A2 387 aa16.68■□□□□ 0.26
CACNA1E-208ENST00000533229 CAPN2P17655 700 aa16.68■□□□□ 0.26
CACNA1E-208ENST00000533229 VCAM1P19320 739 aa16.68■□□□□ 0.26
CACNA1E-208ENST00000533229 YWHABP31946 246 aaKnown RBP16.68■□□□□ 0.26
CACNA1E-208ENST00000533229 MYL7Q01449 175 aa16.68■□□□□ 0.26
CACNA1E-208ENST00000533229 MTMR2Q13614 643 aa16.68■□□□□ 0.26
CACNA1E-208ENST00000533229 ARHGAP44Q17R89 818 aa16.68■□□□□ 0.26
CACNA1E-208ENST00000533229 KCTD19Q17RG1 926 aaPredicted RBP16.68■□□□□ 0.26
CACNA1E-208ENST00000533229 FAM153CQ494X1 144 aa16.68■□□□□ 0.26
CACNA1E-208ENST00000533229 SLFN11Q7Z7L1 901 aa16.68■□□□□ 0.26
CACNA1E-208ENST00000533229 PALB2Q86YC2 1186 aa16.68■□□□□ 0.26
CACNA1E-208ENST00000533229 METTL13Q8N6R0 699 aa16.68■□□□□ 0.26
CACNA1E-208ENST00000533229 GOLGA5Q8TBA6 731 aa16.68■□□□□ 0.26
CACNA1E-208ENST00000533229 FAM153AQ9UHL3 310 aa16.68■□□□□ 0.26
CACNA1E-208ENST00000533229 NFU1Q9UMS0 254 aa16.68■□□□□ 0.26
CACNA1E-208ENST00000533229 STXBP5LQ9Y2K9 1186 aa16.68■□□□□ 0.26
CACNA1E-208ENST00000533229 FOXN3O00409 490 aaPredicted RBP16.67■□□□□ 0.26
CACNA1E-208ENST00000533229 MYCLP12524 364 aaPredicted RBP16.67■□□□□ 0.26
CACNA1E-208ENST00000533229 PLS3P13797 630 aa16.67■□□□□ 0.26
CACNA1E-208ENST00000533229 PPP3CAQ08209 521 aa16.67■□□□□ 0.26
CACNA1E-208ENST00000533229 TBC1D10BQ4KMP7 808 aaPredicted RBP16.67■□□□□ 0.26
CACNA1E-208ENST00000533229 C1orf220Q5T0J3 134 aa16.67■□□□□ 0.26
CACNA1E-208ENST00000533229 EMBQ6PCB8 327 aa16.67■□□□□ 0.26
CACNA1E-208ENST00000533229 PLEKHO2Q8TD55 490 aa16.67■□□□□ 0.26
CACNA1E-208ENST00000533229 TAF4BQ92750 862 aa16.67■□□□□ 0.26
CACNA1E-208ENST00000533229 TAS2R14Q9NYV8 317 aa16.67■□□□□ 0.26
CACNA1E-208ENST00000533229 PPP1R9AQ9ULJ8 1098 aa16.67■□□□□ 0.26
CACNA1E-208ENST00000533229 IGSF9BQ9UPX0 1349 aa16.67■□□□□ 0.26
CACNA1E-208ENST00000533229 A0A0A6YYK5 440 aaPredicted RBP16.67■□□□□ 0.26
CACNA1E-208ENST00000533229 CES2O00748 559 aa16.67■□□□□ 0.26
CACNA1E-208ENST00000533229 BACH1O14867 736 aa16.67■□□□□ 0.26
CACNA1E-208ENST00000533229 RAD51CO43502 376 aa16.67■□□□□ 0.26
CACNA1E-208ENST00000533229 CCNE2O96020 404 aa16.67■□□□□ 0.26
CACNA1E-208ENST00000533229 TNIP1Q15025 636 aa16.67■□□□□ 0.26
CACNA1E-208ENST00000533229 IFI16Q16666 785 aaKnown RBP16.67■□□□□ 0.26
CACNA1E-208ENST00000533229 ZSCAN26Q16670 478 aa16.67■□□□□ 0.26
CACNA1E-208ENST00000533229 KLHL7Q8IXQ5 586 aa16.67■□□□□ 0.26
CACNA1E-208ENST00000533229 IFT81Q8WYA0 676 aa16.67■□□□□ 0.26
CACNA1E-208ENST00000533229 CAVIN3Q969G5 261 aa16.67■□□□□ 0.26
CACNA1E-208ENST00000533229 INTUQ9ULD6 942 aa16.67■□□□□ 0.26
CACNA1E-208ENST00000533229 RIPK3Q9Y572 518 aa16.67■□□□□ 0.26
CACNA1E-208ENST00000533229 ATP8B3O60423 1300 aa16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 EMSYQ7Z589 1322 aa16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 CEP104O60308 925 aa16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 LYPLA2O95372 231 aa16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 ACTN2P35609 894 aa16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 NPEPPSP55786 919 aa16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 MYBPC2Q14324 1141 aa16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 SAMD7Q7Z3H4 446 aa16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 DAAM2Q86T65 1068 aa16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 NT5DC3Q86UY8 548 aa16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 IFT20Q8IY31 132 aa16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 PROCA1Q8NCQ7 364 aaPredicted RBP16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 SCFD2Q8WU76 684 aa16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 CASKIN2Q8WXE0 1202 aa16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 RMDN3Q96TC7 470 aa16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 PDCD2LQ9BRP1 358 aa16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 RPAP3Q9H6T3 665 aaPredicted RBP16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 TMEM206Q9H813 350 aa16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 TBC1D22BQ9NU19 505 aa16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 PIM2Q9P1W9 311 aa16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 CTNND1O60716 968 aaKnown RBP16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 MAPTP10636 758 aaKnown RBP16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 ABCB4P21439 1286 aa16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 GCLMP48507 274 aa16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 PLA2G4FQ68DD2 849 aa16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 PEX26Q7Z412 305 aa16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 HAUS6Q7Z4H7 955 aa16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 ARHGEF19Q8IW93 802 aa16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 SLC35G2Q8TBE7 412 aa16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 ACTRT1Q8TDG2 376 aa16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 JDP2Q8WYK2 163 aa16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 PBKQ96KB5 322 aa16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 TRERF1Q96PN7 1200 aa16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 AP1M1Q9BXS5 423 aa16.66■□□□□ 0.26
CACNA1E-208ENST00000533229 SLC16A4O15374 487 aa16.65■□□□□ 0.26
CACNA1E-208ENST00000533229 LMNB1P20700 586 aa16.65■□□□□ 0.26
CACNA1E-208ENST00000533229 VAMP7P51809 220 aa16.65■□□□□ 0.26
CACNA1E-208ENST00000533229 PEX3P56589 373 aa16.65■□□□□ 0.26
CACNA1E-208ENST00000533229 ZNF280AP59817 542 aaPredicted RBP16.65■□□□□ 0.26
CACNA1E-208ENST00000533229 GTF2BQ00403 316 aa16.65■□□□□ 0.26
CACNA1E-208ENST00000533229 NSMFQ6X4W1 530 aa16.65■□□□□ 0.26
CACNA1E-208ENST00000533229 ILDR2Q71H61 639 aa16.65■□□□□ 0.26
CACNA1E-208ENST00000533229 INTS8Q75QN2 995 aaKnown RBP16.65■□□□□ 0.26
CACNA1E-208ENST00000533229 AFAP1L1Q8TED9 768 aa16.65■□□□□ 0.26
CACNA1E-208ENST00000533229 ARHGEF26Q96DR7 871 aa16.65■□□□□ 0.26
CACNA1E-208ENST00000533229 ACCSQ96QU6 501 aa16.65■□□□□ 0.26
CACNA1E-208ENST00000533229 PXMP2Q9NR77 195 aa16.65■□□□□ 0.26
CACNA1E-208ENST00000533229 HSPBP1Q9NZL4 362 aa16.65■□□□□ 0.26
CACNA1E-208ENST00000533229 VWA5AO00534 786 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms