RNA–Protein interactions for RNA: ENST00000533154.1

C11orf54-212, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best)

Gene C11orf54, Length 903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-212ENST00000533154 VSTM5A8MXK1 200 aa6.38□□□□□ -1.39
C11orf54-212ENST00000533154 FAM155AB1AL88 458 aaPredicted RBP6.38□□□□□ -1.39
C11orf54-212ENST00000533154 H7BY64 318 aa6.38□□□□□ -1.39
C11orf54-212ENST00000533154 RBAK-RBAKDNI3L0D1 243 aa6.38□□□□□ -1.39
C11orf54-212ENST00000533154 ZNF561-AS1K7EIQ3 104 aa6.38□□□□□ -1.39
C11orf54-212ENST00000533154 ERC2O15083 957 aa6.38□□□□□ -1.39
C11orf54-212ENST00000533154 TGM5O43548 720 aa6.38□□□□□ -1.39
C11orf54-212ENST00000533154 NUAK1O60285 661 aa6.38□□□□□ -1.39
C11orf54-212ENST00000533154 OFD1O75665 1012 aa6.38□□□□□ -1.39
C11orf54-212ENST00000533154 TBC1D8O95759 1140 aa6.38□□□□□ -1.39
C11orf54-212ENST00000533154 PF4V1P10720 104 aa6.38□□□□□ -1.39
C11orf54-212ENST00000533154 TRIM27P14373 513 aa6.38□□□□□ -1.39
C11orf54-212ENST00000533154 CLCN7P51798 805 aa6.38□□□□□ -1.39
C11orf54-212ENST00000533154 DMTNQ08495 405 aa6.38□□□□□ -1.39
C11orf54-212ENST00000533154 TCIRG1Q13488 830 aa6.38□□□□□ -1.39
C11orf54-212ENST00000533154 GTF2H3Q13889 308 aa6.38□□□□□ -1.39
C11orf54-212ENST00000533154 TERF2Q15554 542 aa6.38□□□□□ -1.39
C11orf54-212ENST00000533154 GAB4Q2WGN9 574 aa6.38□□□□□ -1.39
C11orf54-212ENST00000533154 SLC4A10Q6U841 1118 aa6.38□□□□□ -1.39
C11orf54-212ENST00000533154 HHIPL2Q6UWX4 724 aa6.38□□□□□ -1.39
C11orf54-212ENST00000533154 RASSF3Q86WH2 238 aa6.38□□□□□ -1.39
C11orf54-212ENST00000533154 CMTR2Q8IYT2 770 aaKnown RBP6.38□□□□□ -1.39
C11orf54-212ENST00000533154 IPO4Q8TEX9 1081 aaKnown RBP6.38□□□□□ -1.39
C11orf54-212ENST00000533154 FAXDC2Q96IV6 333 aa6.38□□□□□ -1.39
C11orf54-212ENST00000533154 MPHOSPH6Q99547 160 aaKnown RBP6.38□□□□□ -1.39
C11orf54-212ENST00000533154 PANK2Q9BZ23 570 aa6.38□□□□□ -1.39
C11orf54-212ENST00000533154 CD320Q9NPF0 282 aa6.38□□□□□ -1.39
C11orf54-212ENST00000533154 AP5S1Q9NUS5 200 aa6.38□□□□□ -1.39
C11orf54-212ENST00000533154 H2AFY2Q9P0M6 372 aaPredicted RBP6.38□□□□□ -1.39
C11orf54-212ENST00000533154 PPARGC1AQ9UBK2 798 aaKnown RBP6.38□□□□□ -1.39
C11orf54-212ENST00000533154 MRFAP1Q9Y605 127 aa6.38□□□□□ -1.39
C11orf54-212ENST00000533154 EIF3AQ14152 1382 aaKnown RBP6.38□□□□□ -1.39
C11orf54-212ENST00000533154 ATP7BP35670 1465 aa6.38□□□□□ -1.39
C11orf54-212ENST00000533154 PHRF1Q9P1Y6 1649 aaKnown RBP6.38□□□□□ -1.39
C11orf54-212ENST00000533154 ARHGEF28Q8N1W1 1705 aaKnown RBP6.37□□□□□ -1.39
C11orf54-212ENST00000533154 CAMTA1Q9Y6Y1 1673 aa6.37□□□□□ -1.39
C11orf54-212ENST00000533154 USP19O94966 1318 aa6.37□□□□□ -1.39
C11orf54-212ENST00000533154 SSU72P8A0A1W2PR75 194 aa6.37□□□□□ -1.39
C11orf54-212ENST00000533154 FOXD2O60548 495 aaPredicted RBP6.37□□□□□ -1.39
C11orf54-212ENST00000533154 ZBTB48P10074 688 aaPredicted RBP6.37□□□□□ -1.39
C11orf54-212ENST00000533154 LSP1P33241 339 aa6.37□□□□□ -1.39
C11orf54-212ENST00000533154 LRRC32Q14392 662 aa6.37□□□□□ -1.39
C11orf54-212ENST00000533154 GBX1Q14549 363 aa6.37□□□□□ -1.39
C11orf54-212ENST00000533154 PCBP2Q15366 365 aaKnown RBP eCLIP6.37□□□□□ -1.39
C11orf54-212ENST00000533154 GPR19Q15760 415 aa6.37□□□□□ -1.39
C11orf54-212ENST00000533154 HABP4Q5JVS0 413 aaKnown RBP6.37□□□□□ -1.39
C11orf54-212ENST00000533154 BROXQ5VW32 411 aa6.37□□□□□ -1.39
C11orf54-212ENST00000533154 KSR2Q6VAB6 950 aa6.37□□□□□ -1.39
C11orf54-212ENST00000533154 TSHZ1Q6ZSZ6 1077 aa6.37□□□□□ -1.39
C11orf54-212ENST00000533154 PNMA8AQ86V59 439 aaPredicted RBP6.37□□□□□ -1.39
C11orf54-212ENST00000533154 TPH2Q8IWU9 490 aa6.37□□□□□ -1.39
C11orf54-212ENST00000533154 ZNF610Q8N9Z0 462 aa6.37□□□□□ -1.39
C11orf54-212ENST00000533154 CDK19Q9BWU1 502 aa6.37□□□□□ -1.39
C11orf54-212ENST00000533154 FOXP3Q9BZS1 431 aa6.37□□□□□ -1.39
C11orf54-212ENST00000533154 GRPEL1Q9HAV7 217 aa6.37□□□□□ -1.39
C11orf54-212ENST00000533154 SMURF1Q9HCE7 757 aa6.37□□□□□ -1.39
C11orf54-212ENST00000533154 CHST12Q9NRB3 414 aa6.37□□□□□ -1.39
C11orf54-212ENST00000533154 CATSPERZQ9NTU4 200 aa6.37□□□□□ -1.39
C11orf54-212ENST00000533154 FBXL7Q9UJT9 491 aa6.37□□□□□ -1.39
C11orf54-212ENST00000533154 ZNF652Q9Y2D9 606 aa6.37□□□□□ -1.39
C11orf54-212ENST00000533154 POLR3AO14802 1390 aaPredicted RBP6.36□□□□□ -1.39
C11orf54-212ENST00000533154 ACEP12821 1306 aa6.36□□□□□ -1.39
C11orf54-212ENST00000533154 MYBBP1AQ9BQG0 1328 aaKnown RBP6.36□□□□□ -1.39
C11orf54-212ENST00000533154 PITPNM2Q9BZ72 1349 aa6.36□□□□□ -1.39
C11orf54-212ENST00000533154 C7orf72A4D263 438 aa6.36□□□□□ -1.39
C11orf54-212ENST00000533154 PSPNO60542 156 aa6.36□□□□□ -1.39
C11orf54-212ENST00000533154 PDE6AP16499 860 aa6.36□□□□□ -1.39
C11orf54-212ENST00000533154 LPOP22079 712 aaPredicted RBP6.36□□□□□ -1.39
C11orf54-212ENST00000533154 RIPK4P57078 832 aa6.36□□□□□ -1.39
C11orf54-212ENST00000533154 IRF9Q00978 393 aa6.36□□□□□ -1.39
C11orf54-212ENST00000533154 LAPTM5Q13571 262 aa6.36□□□□□ -1.39
C11orf54-212ENST00000533154 ZNF174Q15697 407 aa6.36□□□□□ -1.39
C11orf54-212ENST00000533154 NKPD1Q17RQ9 610 aa6.36□□□□□ -1.39
C11orf54-212ENST00000533154 NBPF8Q3BBV2 869 aa6.36□□□□□ -1.39
C11orf54-212ENST00000533154 EPM2AIP1Q7L775 607 aaPredicted RBP6.36□□□□□ -1.39
C11orf54-212ENST00000533154 NLRP10Q86W26 655 aa6.36□□□□□ -1.39
C11orf54-212ENST00000533154 USP33Q8TEY7 942 aa6.36□□□□□ -1.39
C11orf54-212ENST00000533154 ASB11Q8WXH4 323 aa6.36□□□□□ -1.39
C11orf54-212ENST00000533154 TRIM44Q96DX7 344 aaPredicted RBP6.36□□□□□ -1.39
C11orf54-212ENST00000533154 CLIP3Q96DZ5 547 aa6.36□□□□□ -1.39
C11orf54-212ENST00000533154 CDADC1Q9BWV3 514 aa6.36□□□□□ -1.39
C11orf54-212ENST00000533154 PARD6AQ9NPB6 346 aa6.36□□□□□ -1.39
C11orf54-212ENST00000533154 MKS1Q9NXB0 559 aa6.36□□□□□ -1.39
C11orf54-212ENST00000533154 CLDND1Q9NY35 253 aa6.36□□□□□ -1.39
C11orf54-212ENST00000533154 NAP1L2Q9ULW6 460 aaPredicted RBP6.36□□□□□ -1.39
C11orf54-212ENST00000533154 ITSN1Q15811 1721 aa6.36□□□□□ -1.39
C11orf54-212ENST00000533154 NUP188Q5SRE5 1749 aa6.36□□□□□ -1.39
C11orf54-212ENST00000533154 RREB1Q92766 1687 aa6.36□□□□□ -1.39
C11orf54-212ENST00000533154 SSH2Q76I76 1423 aa6.35□□□□□ -1.39
C11orf54-212ENST00000533154 CREB3O43889 395 aa6.35□□□□□ -1.39
C11orf54-212ENST00000533154 NPHS1O60500 1241 aa6.35□□□□□ -1.39
C11orf54-212ENST00000533154 LDHAP00338 332 aaKnown RBP6.35□□□□□ -1.39
C11orf54-212ENST00000533154 LTFP02788 710 aa6.35□□□□□ -1.39
C11orf54-212ENST00000533154 BCL6P41182 706 aa6.35□□□□□ -1.39
C11orf54-212ENST00000533154 SMAD3P84022 425 aaKnown RBP6.35□□□□□ -1.39
C11orf54-212ENST00000533154 CCDC173Q0VFZ6 552 aa6.35□□□□□ -1.39
C11orf54-212ENST00000533154 CNGB1Q14028 1251 aaPredicted RBP6.35□□□□□ -1.39
C11orf54-212ENST00000533154 SMAD2Q15796 467 aaKnown RBP6.35□□□□□ -1.39
C11orf54-212ENST00000533154 FIGNQ5HY92 759 aa6.35□□□□□ -1.39
C11orf54-212ENST00000533154 PGM2L1Q6PCE3 622 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms