RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 FAM20AQ96MK3 541 aa19.98■□□□□ 0.79
PCF11-206ENST00000533018 NLRP4Q96MN2 994 aa19.98■□□□□ 0.79
PCF11-206ENST00000533018 TCF25Q9BQ70 676 aa19.98■□□□□ 0.79
PCF11-206ENST00000533018 JPH2Q9BR39 696 aaPredicted RBP19.98■□□□□ 0.79
PCF11-206ENST00000533018 INO80BQ9C086 356 aaPredicted RBP19.98■□□□□ 0.79
PCF11-206ENST00000533018 ORC3Q9UBD5 711 aaPredicted RBP19.98■□□□□ 0.79
PCF11-206ENST00000533018 STK36Q9NRP7 1315 aa19.98■□□□□ 0.79
PCF11-206ENST00000533018 PRR33A8MZF0 331 aa19.97■□□□□ 0.79
PCF11-206ENST00000533018 DKC1O60832 514 aaKnown RBP eCLIP19.97■□□□□ 0.79
PCF11-206ENST00000533018 MAFO75444 373 aaPredicted RBP19.97■□□□□ 0.79
PCF11-206ENST00000533018 GLP2RO95838 553 aa19.97■□□□□ 0.79
PCF11-206ENST00000533018 GCFC2P16383 781 aaKnown RBP19.97■□□□□ 0.79
PCF11-206ENST00000533018 PPM1AP35813 382 aa19.97■□□□□ 0.79
PCF11-206ENST00000533018 PLA2G5P39877 138 aa19.97■□□□□ 0.79
PCF11-206ENST00000533018 AK2P54819 239 aa19.97■□□□□ 0.79
PCF11-206ENST00000533018 COASYQ13057 564 aa19.97■□□□□ 0.79
PCF11-206ENST00000533018 LONRF3Q496Y0 759 aa19.97■□□□□ 0.79
PCF11-206ENST00000533018 CLLU1OSQ5K130 101 aa19.97■□□□□ 0.79
PCF11-206ENST00000533018 TWF2Q6IBS0 349 aaKnown RBP19.97■□□□□ 0.79
PCF11-206ENST00000533018 PPP4R3AQ6IN85 833 aa19.97■□□□□ 0.79
PCF11-206ENST00000533018 ANO5Q75V66 913 aa19.97■□□□□ 0.79
PCF11-206ENST00000533018 TMC7Q7Z402 723 aa19.97■□□□□ 0.79
PCF11-206ENST00000533018 KSR1Q8IVT5 923 aa19.97■□□□□ 0.79
PCF11-206ENST00000533018 OXER1Q8TDS5 423 aa19.97■□□□□ 0.79
PCF11-206ENST00000533018 CEP89Q96ST8 783 aa19.97■□□□□ 0.79
PCF11-206ENST00000533018 CDCA3Q99618 268 aaPredicted RBP19.97■□□□□ 0.79
PCF11-206ENST00000533018 NAP1L4Q99733 375 aaKnown RBP19.97■□□□□ 0.79
PCF11-206ENST00000533018 CHST12Q9NRB3 414 aa19.97■□□□□ 0.79
PCF11-206ENST00000533018 RNF19AQ9NV58 838 aa19.97■□□□□ 0.79
PCF11-206ENST00000533018 PIN4Q9Y237 131 aaKnown RBP19.97■□□□□ 0.79
PCF11-206ENST00000533018 LZTS1Q9Y250 596 aa19.97■□□□□ 0.79
PCF11-206ENST00000533018 IGKV6-21A0A0C4DH24 114 aa19.96■□□□□ 0.79
PCF11-206ENST00000533018 EYA4O95677 639 aa19.96■□□□□ 0.79
PCF11-206ENST00000533018 SRGAP2BP0DMP2 458 aa19.96■□□□□ 0.79
PCF11-206ENST00000533018 CA8P35219 290 aa19.96■□□□□ 0.79
PCF11-206ENST00000533018 NPEPPSP55786 919 aa19.96■□□□□ 0.79
PCF11-206ENST00000533018 RBM10P98175 930 aaKnown RBP19.96■□□□□ 0.79
PCF11-206ENST00000533018 PLCB3Q01970 1234 aa19.96■□□□□ 0.79
PCF11-206ENST00000533018 PPP2R5CQ13362 524 aa19.96■□□□□ 0.79
PCF11-206ENST00000533018 DUSP6Q16828 381 aa19.96■□□□□ 0.79
PCF11-206ENST00000533018 NCAPH2Q6IBW4 605 aa19.96■□□□□ 0.79
PCF11-206ENST00000533018 CATSPER4Q7RTX7 472 aa19.96■□□□□ 0.79
PCF11-206ENST00000533018 ZNF410Q86VK4 478 aa19.96■□□□□ 0.79
PCF11-206ENST00000533018 SMRP1Q8NCR6 262 aa19.96■□□□□ 0.79
PCF11-206ENST00000533018 SLC7A3Q8WY07 619 aa19.96■□□□□ 0.79
PCF11-206ENST00000533018 CEP170P1Q96L14 293 aa19.96■□□□□ 0.79
PCF11-206ENST00000533018 CYP26B1Q9NR63 512 aa19.96■□□□□ 0.79
PCF11-206ENST00000533018 PPP4R2Q9NY27 417 aa19.96■□□□□ 0.79
PCF11-206ENST00000533018 SPG21Q9NZD8 308 aa19.96■□□□□ 0.79
PCF11-206ENST00000533018 VAV3Q9UKW4 847 aa19.96■□□□□ 0.79
PCF11-206ENST00000533018 FSD2A1L4K1 749 aa19.95■□□□□ 0.78
PCF11-206ENST00000533018 FSCN2O14926 492 aa19.95■□□□□ 0.78
PCF11-206ENST00000533018 BAG4O95429 457 aaKnown RBP19.95■□□□□ 0.78
PCF11-206ENST00000533018 P4HBP07237 508 aaKnown RBP19.95■□□□□ 0.78
PCF11-206ENST00000533018 ALDH7A1P49419 539 aaKnown RBP19.95■□□□□ 0.78
PCF11-206ENST00000533018 POLGP54098 1239 aaPredicted RBP19.95■□□□□ 0.78
PCF11-206ENST00000533018 ANAPC15P60006 121 aa19.95■□□□□ 0.78
PCF11-206ENST00000533018 LLGL2Q6P1M3 1020 aa19.95■□□□□ 0.78
PCF11-206ENST00000533018 ZNF598Q86UK7 904 aaKnown RBP19.95■□□□□ 0.78
PCF11-206ENST00000533018 NECAB1Q8N987 351 aa19.95■□□□□ 0.78
PCF11-206ENST00000533018 MRPL9Q9BYD2 267 aaKnown RBP19.95■□□□□ 0.78
PCF11-206ENST00000533018 BRMS1Q9HCU9 246 aa19.95■□□□□ 0.78
PCF11-206ENST00000533018 KCNMB3Q9NPA1 279 aa19.95■□□□□ 0.78
PCF11-206ENST00000533018 BMP2KQ9NSY1 1161 aaPredicted RBP19.95■□□□□ 0.78
PCF11-206ENST00000533018 MUTYHQ9UIF7 546 aa19.95■□□□□ 0.78
PCF11-206ENST00000533018 USP15Q9Y4E8 981 aaPredicted RBP19.95■□□□□ 0.78
PCF11-206ENST00000533018 CTDNEP1O95476 244 aa19.94■□□□□ 0.78
PCF11-206ENST00000533018 SKIP12755 728 aa19.94■□□□□ 0.78
PCF11-206ENST00000533018 KRT2P35908 639 aa19.94■□□□□ 0.78
PCF11-206ENST00000533018 PHKA2P46019 1235 aa19.94■□□□□ 0.78
PCF11-206ENST00000533018 POTEDQ86YR6 584 aa19.94■□□□□ 0.78
PCF11-206ENST00000533018 RNF135Q8IUD6 432 aa19.94■□□□□ 0.78
PCF11-206ENST00000533018 EXOC8Q8IYI6 725 aa19.94■□□□□ 0.78
PCF11-206ENST00000533018 NGRNQ9NPE2 291 aaKnown RBP19.94■□□□□ 0.78
PCF11-206ENST00000533018 HIDE1A8MVS5 230 aa19.93■□□□□ 0.78
PCF11-206ENST00000533018 NT5C1B-RDH14C9J2C7 533 aa19.93■□□□□ 0.78
PCF11-206ENST00000533018 TBX3O15119 743 aa19.93■□□□□ 0.78
PCF11-206ENST00000533018 SRGAP2CP0DJJ0 459 aa19.93■□□□□ 0.78
PCF11-206ENST00000533018 ATF7P17544 494 aaPredicted RBP19.93■□□□□ 0.78
PCF11-206ENST00000533018 TECP42680 631 aa19.93■□□□□ 0.78
PCF11-206ENST00000533018 EARS2Q5JPH6 523 aaKnown RBP19.93■□□□□ 0.78
PCF11-206ENST00000533018 OTUD6AQ7L8S5 288 aa19.93■□□□□ 0.78
PCF11-206ENST00000533018 SLFN12Q8IYM2 578 aa19.93■□□□□ 0.78
PCF11-206ENST00000533018 ZNF579Q8NAF0 562 aaKnown RBP19.93■□□□□ 0.78
PCF11-206ENST00000533018 HAS1Q92839 578 aa19.93■□□□□ 0.78
PCF11-206ENST00000533018 LPPQ93052 612 aa19.93■□□□□ 0.78
PCF11-206ENST00000533018 TMEM143Q96AN5 459 aa19.93■□□□□ 0.78
PCF11-206ENST00000533018 LXNQ9BS40 222 aa19.93■□□□□ 0.78
PCF11-206ENST00000533018 APOL5Q9BWW9 433 aa19.93■□□□□ 0.78
PCF11-206ENST00000533018 INPP5FQ9Y2H2 1132 aa19.93■□□□□ 0.78
PCF11-206ENST00000533018 COL4A3BPQ9Y5P4 624 aa19.93■□□□□ 0.78
PCF11-206ENST00000533018 FAM205CA6NFA0 338 aa19.92■□□□□ 0.78
PCF11-206ENST00000533018 ZC3H11AO75152 810 aaKnown RBP eCLIP19.92■□□□□ 0.788e-19■■■□□ 16.8
PCF11-206ENST00000533018 YWHABP31946 246 aaKnown RBP19.92■□□□□ 0.78
PCF11-206ENST00000533018 RFC5P40937 340 aa19.92■□□□□ 0.78
PCF11-206ENST00000533018 FOSBP53539 338 aa19.92■□□□□ 0.78
PCF11-206ENST00000533018 BCAR1P56945 870 aa19.92■□□□□ 0.78
PCF11-206ENST00000533018 CYP4A11Q02928 519 aa19.92■□□□□ 0.78
PCF11-206ENST00000533018 RNASELQ05823 741 aaKnown RBP19.92■□□□□ 0.78
PCF11-206ENST00000533018 NR5A1Q13285 461 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms