RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 CTC1Q2NKJ3 1217 aa19.93■□□□□ 0.78
SMG1-203ENST00000532700 IL27Q8NEV9 243 aa19.93■□□□□ 0.78
SMG1-203ENST00000532700 LPPQ93052 612 aa19.93■□□□□ 0.78
SMG1-203ENST00000532700 PABPC5Q96DU9 382 aaKnown RBP19.93■□□□□ 0.78
SMG1-203ENST00000532700 HSD17B14Q9BPX1 270 aa19.93■□□□□ 0.78
SMG1-203ENST00000532700 LMAN2LQ9H0V9 348 aa19.93■□□□□ 0.78
SMG1-203ENST00000532700 ELAC1Q9H777 363 aaKnown RBP19.93■□□□□ 0.78
SMG1-203ENST00000532700 TTC12Q9H892 705 aaPredicted RBP19.93■□□□□ 0.78
SMG1-203ENST00000532700 CLDND1Q9NY35 253 aa19.93■□□□□ 0.78
SMG1-203ENST00000532700 BDP1A6H8Y1 2624 aa19.93■□□□□ 0.78
SMG1-203ENST00000532700 MARCH6O60337 910 aa19.92■□□□□ 0.78
SMG1-203ENST00000532700 NEMFO60524 1076 aa19.92■□□□□ 0.78
SMG1-203ENST00000532700 MCM7P33993 719 aa19.92■□□□□ 0.78
SMG1-203ENST00000532700 RBM25P49756 843 aaKnown RBP19.92■□□□□ 0.78
SMG1-203ENST00000532700 EMC2Q15006 297 aa19.92■□□□□ 0.78
SMG1-203ENST00000532700 CLUL1Q15846 466 aa19.92■□□□□ 0.78
SMG1-203ENST00000532700 ODR4Q5SWX8 454 aa19.92■□□□□ 0.78
SMG1-203ENST00000532700 EP400NLQ6ZTU2 488 aa19.92■□□□□ 0.78
SMG1-203ENST00000532700 TPH2Q8IWU9 490 aa19.92■□□□□ 0.78
SMG1-203ENST00000532700 SLFN12Q8IYM2 578 aa19.92■□□□□ 0.78
SMG1-203ENST00000532700 HELQQ8TDG4 1101 aa19.92■□□□□ 0.78
SMG1-203ENST00000532700 PRPF31Q8WWY3 499 aaKnown RBP19.92■□□□□ 0.78
SMG1-203ENST00000532700 NAP1L4Q99733 375 aaKnown RBP19.92■□□□□ 0.78
SMG1-203ENST00000532700 GCOM2Q9BZD3 368 aaPredicted RBP19.92■□□□□ 0.78
SMG1-203ENST00000532700 IGFLR1Q9H665 355 aa19.92■□□□□ 0.78
SMG1-203ENST00000532700 COL4A3BPQ9Y5P4 624 aa19.92■□□□□ 0.78
SMG1-203ENST00000532700 B4GALT3O60512 393 aa19.91■□□□□ 0.78
SMG1-203ENST00000532700 POLGP54098 1239 aaPredicted RBP19.91■□□□□ 0.78
SMG1-203ENST00000532700 ERVFC1P60507 584 aa19.91■□□□□ 0.78
SMG1-203ENST00000532700 TRIM29Q14134 588 aa19.91■□□□□ 0.78
SMG1-203ENST00000532700 XKR9Q5GH70 373 aa19.91■□□□□ 0.78
SMG1-203ENST00000532700 C8orf76Q96K31 380 aa19.91■□□□□ 0.78
SMG1-203ENST00000532700 TMEM117Q9H0C3 514 aa19.91■□□□□ 0.78
SMG1-203ENST00000532700 UPF2Q9HAU5 1272 aaKnown RBP19.91■□□□□ 0.78
SMG1-203ENST00000532700 PCDHA12Q9UN75 941 aa19.91■□□□□ 0.78
SMG1-203ENST00000532700 A0A0U1RQF3 1178 aa19.9■□□□□ 0.78
SMG1-203ENST00000532700 FGF18O76093 207 aa19.9■□□□□ 0.78
SMG1-203ENST00000532700 GLP2RO95838 553 aa19.9■□□□□ 0.78
SMG1-203ENST00000532700 SPATA31C1P0DKV0 1188 aa19.9■□□□□ 0.78
SMG1-203ENST00000532700 ZSCAN20P17040 1043 aaPredicted RBP19.9■□□□□ 0.78
SMG1-203ENST00000532700 LAMTOR4Q0VGL1 99 aa19.9■□□□□ 0.78
SMG1-203ENST00000532700 ZNF174Q15697 407 aa19.9■□□□□ 0.78
SMG1-203ENST00000532700 SPOUT1Q5T280 376 aaKnown RBP19.9■□□□□ 0.78
SMG1-203ENST00000532700 PTCRAQ6ISU1 281 aaPredicted RBP19.9■□□□□ 0.78
SMG1-203ENST00000532700 ZNF410Q86VK4 478 aa19.9■□□□□ 0.78
SMG1-203ENST00000532700 FBXO18Q8NFZ0 1043 aa19.9■□□□□ 0.78
SMG1-203ENST00000532700 VN1R2Q8NFZ6 395 aa19.9■□□□□ 0.78
SMG1-203ENST00000532700 ASAP3Q8TDY4 903 aa19.9■□□□□ 0.78
SMG1-203ENST00000532700 PIGOQ8TEQ8 1089 aa19.9■□□□□ 0.78
SMG1-203ENST00000532700 LLPHQ9BRT6 129 aaKnown RBP19.9■□□□□ 0.78
SMG1-203ENST00000532700 ZSWIM4Q9H7M6 989 aa19.9■□□□□ 0.78
SMG1-203ENST00000532700 PIN4Q9Y237 131 aaKnown RBP19.9■□□□□ 0.78
SMG1-203ENST00000532700 C5orf42Q9H799 3197 aa19.9■□□□□ 0.78
SMG1-203ENST00000532700 GRXCR2A6NFK2 248 aa19.89■□□□□ 0.77
SMG1-203ENST00000532700 MED24O75448 989 aa19.89■□□□□ 0.77
SMG1-203ENST00000532700 BAG4O95429 457 aaKnown RBP19.89■□□□□ 0.77
SMG1-203ENST00000532700 SRGAP2CP0DJJ0 459 aa19.89■□□□□ 0.77
SMG1-203ENST00000532700 PHKA2P46019 1235 aa19.89■□□□□ 0.77
SMG1-203ENST00000532700 DNM2P50570 870 aa19.89■□□□□ 0.77
SMG1-203ENST00000532700 RBM23Q86U06 439 aaKnown RBP19.89■□□□□ 0.77
SMG1-203ENST00000532700 SLC7A3Q8WY07 619 aa19.89■□□□□ 0.77
SMG1-203ENST00000532700 LYPLA2O95372 231 aa19.88■□□□□ 0.77
SMG1-203ENST00000532700 HOXA11P31270 313 aaPredicted RBP19.88■□□□□ 0.77
SMG1-203ENST00000532700 RFC5P40937 340 aa19.88■□□□□ 0.77
SMG1-203ENST00000532700 NRIP1P48552 1158 aa19.88■□□□□ 0.77
SMG1-203ENST00000532700 AFF1P51825 1210 aaKnown RBP19.88■□□□□ 0.77
SMG1-203ENST00000532700 ADAM15Q13444 863 aa19.88■□□□□ 0.77
SMG1-203ENST00000532700 NAALADL2Q58DX5 795 aa19.88■□□□□ 0.77
SMG1-203ENST00000532700 UBXN11Q5T124 520 aa19.88■□□□□ 0.77
SMG1-203ENST00000532700 CATSPER4Q7RTX7 472 aa19.88■□□□□ 0.77
SMG1-203ENST00000532700 FERMT3Q86UX7 667 aa19.88■□□□□ 0.77
SMG1-203ENST00000532700 TMEM173Q86WV6 379 aaPredicted RBP19.88■□□□□ 0.77
SMG1-203ENST00000532700 FAM178BQ8IXR5 827 aa19.88■□□□□ 0.77
SMG1-203ENST00000532700 EPHX3Q9H6B9 360 aa19.88■□□□□ 0.77
SMG1-203ENST00000532700 CLEC1BQ9P126 229 aa19.88■□□□□ 0.77
SMG1-203ENST00000532700 RAPGEFL1Q9UHV5 662 aa19.88■□□□□ 0.77
SMG1-203ENST00000532700 NT5C1B-RDH14C9J2C7 533 aa19.87■□□□□ 0.77
SMG1-203ENST00000532700 FSCN2O14926 492 aa19.87■□□□□ 0.77
SMG1-203ENST00000532700 PER2O15055 1255 aa19.87■□□□□ 0.77
SMG1-203ENST00000532700 SFPQP23246 707 aaKnown RBP eCLIP19.87■□□□□ 0.77
SMG1-203ENST00000532700 TOB1P50616 345 aaPredicted RBP19.87■□□□□ 0.77
SMG1-203ENST00000532700 TWF2Q6IBS0 349 aaKnown RBP19.87■□□□□ 0.77
SMG1-203ENST00000532700 KCNT2Q6UVM3 1135 aa19.87■□□□□ 0.77
SMG1-203ENST00000532700 THNSL1Q8IYQ7 743 aa19.87■□□□□ 0.77
SMG1-203ENST00000532700 ZNF710Q8N1W2 664 aa19.87■□□□□ 0.77
SMG1-203ENST00000532700 LRRC43Q8N309 656 aa19.87■□□□□ 0.77
SMG1-203ENST00000532700 C4orf32Q8N8J7 132 aa19.87■□□□□ 0.77
SMG1-203ENST00000532700 BCL7CQ8WUZ0 217 aaPredicted RBP19.87■□□□□ 0.77
SMG1-203ENST00000532700 PSPC1Q8WXF1 523 aaKnown RBP19.87■□□□□ 0.77
SMG1-203ENST00000532700 ZSCAN31Q96LW9 406 aaPredicted RBP19.87■□□□□ 0.77
SMG1-203ENST00000532700 GPRC5CQ9NQ84 441 aa19.87■□□□□ 0.77
SMG1-203ENST00000532700 AGPAT5Q9NUQ2 364 aa19.87■□□□□ 0.77
SMG1-203ENST00000532700 FAM105AQ9NUU6 356 aa19.87■□□□□ 0.77
SMG1-203ENST00000532700 PCDHB12Q9Y5F1 795 aa19.87■□□□□ 0.77
SMG1-203ENST00000532700 NCOR1O75376 2440 aa19.87■□□□□ 0.77
SMG1-203ENST00000532700 DKC1O60832 514 aaKnown RBP eCLIP19.86■□□□□ 0.774e-9■■■■■ 30.3
SMG1-203ENST00000532700 RARRES1P49788 294 aa19.86■□□□□ 0.77
SMG1-203ENST00000532700 CAPSQ13938 189 aa19.86■□□□□ 0.77
SMG1-203ENST00000532700 ECM1Q16610 540 aa19.86■□□□□ 0.77
SMG1-203ENST00000532700 POTEGQ6S5H5 508 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms