RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 RFX5P48382 616 aaPredicted RBP12.14□□□□□ -0.47
PTPRK-221ENST00000532331 ATN1P54259 1190 aaPredicted RBP12.14□□□□□ -0.47
PTPRK-221ENST00000532331 CYP27A1Q02318 531 aa12.14□□□□□ -0.47
PTPRK-221ENST00000532331 GABPB1Q06547 395 aaPredicted RBP12.14□□□□□ -0.47
PTPRK-221ENST00000532331 RPS6KA2Q15349 733 aa12.14□□□□□ -0.47
PTPRK-221ENST00000532331 CDKL2Q92772 493 aa12.14□□□□□ -0.47
PTPRK-221ENST00000532331 HBP1O60381 514 aa12.14□□□□□ -0.47
PTPRK-221ENST00000532331 ICAM1P05362 532 aa12.14□□□□□ -0.47
PTPRK-221ENST00000532331 GARSP41250 739 aaKnown RBP12.14□□□□□ -0.47
PTPRK-221ENST00000532331 ZNF394Q53GI3 561 aa12.14□□□□□ -0.47
PTPRK-221ENST00000532331 TEX2Q8IWB9 1127 aa12.14□□□□□ -0.47
PTPRK-221ENST00000532331 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.14□□□□□ -0.471e-6■■■■■ 67.5
PTPRK-221ENST00000532331 VCX3BQ9H321 246 aa12.14□□□□□ -0.47
PTPRK-221ENST00000532331 STARD7Q9NQZ5 370 aa12.14□□□□□ -0.47
PTPRK-221ENST00000532331 GJB4Q9NTQ9 266 aa12.14□□□□□ -0.47
PTPRK-221ENST00000532331 REREQ9P2R6 1566 aa12.14□□□□□ -0.47
PTPRK-221ENST00000532331 ASAP2O43150 1006 aa12.13□□□□□ -0.47
PTPRK-221ENST00000532331 SLC4A1P02730 911 aa12.13□□□□□ -0.47
PTPRK-221ENST00000532331 ITGA4P13612 1032 aa12.13□□□□□ -0.47
PTPRK-221ENST00000532331 NAA35Q5VZE5 725 aa12.13□□□□□ -0.47
PTPRK-221ENST00000532331 RWDD4Q6NW29 188 aaKnown RBP12.13□□□□□ -0.47
PTPRK-221ENST00000532331 TIPINQ9BVW5 301 aa12.13□□□□□ -0.47
PTPRK-221ENST00000532331 WNT10BO00744 389 aa12.13□□□□□ -0.47
PTPRK-221ENST00000532331 RASSF2P50749 326 aa12.13□□□□□ -0.47
PTPRK-221ENST00000532331 INHBEP58166 350 aa12.13□□□□□ -0.47
PTPRK-221ENST00000532331 CAPN12Q6ZSI9 719 aa12.13□□□□□ -0.47
PTPRK-221ENST00000532331 MAGED2Q9UNF1 606 aaPredicted RBP12.13□□□□□ -0.47
PTPRK-221ENST00000532331 MAD1L1Q9Y6D9 718 aa12.13□□□□□ -0.47
PTPRK-221ENST00000532331 HIP1RO75146 1068 aa12.13□□□□□ -0.47
PTPRK-221ENST00000532331 SUPT20HL2P0C7V6 817 aa12.13□□□□□ -0.47
PTPRK-221ENST00000532331 RFC5P40937 340 aa12.13□□□□□ -0.47
PTPRK-221ENST00000532331 ACER1Q8TDN7 264 aa12.13□□□□□ -0.47
PTPRK-221ENST00000532331 MAGOHBQ96A72 148 aaKnown RBP12.13□□□□□ -0.47
PTPRK-221ENST00000532331 PPP1R13BQ96KQ4 1090 aa12.13□□□□□ -0.47
PTPRK-221ENST00000532331 FAM217BQ9NTX9 383 aaPredicted RBP12.13□□□□□ -0.47
PTPRK-221ENST00000532331 THPOP40225 353 aa12.13□□□□□ -0.47
PTPRK-221ENST00000532331 LRRC31Q6UY01 552 aa12.13□□□□□ -0.47
PTPRK-221ENST00000532331 KCTD6Q8NC69 237 aa12.13□□□□□ -0.47
PTPRK-221ENST00000532331 RASSF4Q9H2L5 321 aa12.13□□□□□ -0.47
PTPRK-221ENST00000532331 POLD4Q9HCU8 107 aa12.13□□□□□ -0.47
PTPRK-221ENST00000532331 CDC23Q9UJX2 597 aa12.13□□□□□ -0.47
PTPRK-221ENST00000532331 AGO2Q9UKV8 859 aaKnown RBP12.13□□□□□ -0.47
PTPRK-221ENST00000532331 CAPN15O75808 1086 aa12.13□□□□□ -0.47
PTPRK-221ENST00000532331 NR3C1P04150 777 aa12.13□□□□□ -0.47
PTPRK-221ENST00000532331 PSMD6Q15008 389 aa12.13□□□□□ -0.47
PTPRK-221ENST00000532331 SLC35F6Q8N357 371 aa12.13□□□□□ -0.47
PTPRK-221ENST00000532331 GDAP1Q8TB36 358 aa12.13□□□□□ -0.47
PTPRK-221ENST00000532331 SCYL1Q96KG9 808 aa12.13□□□□□ -0.47
PTPRK-221ENST00000532331 UBN1Q9NPG3 1134 aa12.13□□□□□ -0.47
PTPRK-221ENST00000532331 BCAP29Q9UHQ4 241 aa12.13□□□□□ -0.47
PTPRK-221ENST00000532331 A8MXQ7 604 aa12.12□□□□□ -0.47
PTPRK-221ENST00000532331 RPS6P62753 249 aaKnown RBP12.12□□□□□ -0.47
PTPRK-221ENST00000532331 C10orf76Q5T2E6 689 aa12.12□□□□□ -0.47
PTPRK-221ENST00000532331 FAM133AQ8N9E0 248 aa12.12□□□□□ -0.47
PTPRK-221ENST00000532331 VCXQ9H320 206 aa12.12□□□□□ -0.47
PTPRK-221ENST00000532331 BCL2L12Q9HB09 334 aa12.12□□□□□ -0.47
PTPRK-221ENST00000532331 RBAKQ9NYW8 714 aaPredicted RBP12.12□□□□□ -0.47
PTPRK-221ENST00000532331 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.12□□□□□ -0.47
PTPRK-221ENST00000532331 FARP1Q9Y4F1 1045 aaPredicted RBP12.12□□□□□ -0.47
PTPRK-221ENST00000532331 SGK1O00141 431 aa12.12□□□□□ -0.47
PTPRK-221ENST00000532331 AP3M2P53677 418 aa12.12□□□□□ -0.47
PTPRK-221ENST00000532331 GUCY2DQ02846 1103 aa12.12□□□□□ -0.47
PTPRK-221ENST00000532331 COASYQ13057 564 aa12.12□□□□□ -0.47
PTPRK-221ENST00000532331 NOP9Q86U38 636 aaKnown RBP12.12□□□□□ -0.47
PTPRK-221ENST00000532331 TAB3Q8N5C8 712 aaPredicted RBP12.12□□□□□ -0.47
PTPRK-221ENST00000532331 TMEM143Q96AN5 459 aa12.12□□□□□ -0.47
PTPRK-221ENST00000532331 MXRA8Q9BRK3 442 aa12.12□□□□□ -0.47
PTPRK-221ENST00000532331 HPCAL4Q9UM19 191 aa12.12□□□□□ -0.47
PTPRK-221ENST00000532331 F8W8V4 182 aa12.12□□□□□ -0.47
PTPRK-221ENST00000532331 EYA4O95677 639 aa12.12□□□□□ -0.47
PTPRK-221ENST00000532331 ZBED6P86452 979 aa12.12□□□□□ -0.47
PTPRK-221ENST00000532331 APBA1Q02410 837 aa12.12□□□□□ -0.47
PTPRK-221ENST00000532331 RPUSD2Q8IZ73 545 aaKnown RBP12.12□□□□□ -0.47
PTPRK-221ENST00000532331 GPD1LQ8N335 351 aa12.12□□□□□ -0.47
PTPRK-221ENST00000532331 TAAR1Q96RJ0 339 aa12.12□□□□□ -0.47
PTPRK-221ENST00000532331 CALN1Q9BXU9 219 aa12.12□□□□□ -0.47
PTPRK-221ENST00000532331 IRAK4Q9NWZ3 460 aa12.12□□□□□ -0.47
PTPRK-221ENST00000532331 KLHL14Q9P2G3 628 aa12.12□□□□□ -0.47
PTPRK-221ENST00000532331 KRT1P04264 644 aa12.12□□□□□ -0.47
PTPRK-221ENST00000532331 YWHAGP61981 247 aaKnown RBP eCLIP12.12□□□□□ -0.47
PTPRK-221ENST00000532331 TOGARAM2Q6ZUX3 1019 aa12.12□□□□□ -0.47
PTPRK-221ENST00000532331 SOCS4Q8WXH5 440 aa12.12□□□□□ -0.47
PTPRK-221ENST00000532331 MOV10L1Q9BXT6 1211 aaKnown RBP12.12□□□□□ -0.47
PTPRK-221ENST00000532331 JMJD4Q9H9V9 463 aa12.12□□□□□ -0.47
PTPRK-221ENST00000532331 FAM114A2Q9NRY5 505 aa12.12□□□□□ -0.47
PTPRK-221ENST00000532331 FBXO28Q9NVF7 368 aa12.12□□□□□ -0.47
PTPRK-221ENST00000532331 PVALEFA0A1B0GWK0 134 aa12.11□□□□□ -0.47
PTPRK-221ENST00000532331 PGK2P07205 417 aa12.11□□□□□ -0.47
PTPRK-221ENST00000532331 RALAP11233 206 aa12.11□□□□□ -0.47
PTPRK-221ENST00000532331 HAUS6Q7Z4H7 955 aa12.11□□□□□ -0.47
PTPRK-221ENST00000532331 ILDR1Q86SU0 546 aaPredicted RBP12.11□□□□□ -0.47
PTPRK-221ENST00000532331 TXNRD3Q86VQ6 643 aa12.11□□□□□ -0.47
PTPRK-221ENST00000532331 SPATA2LQ8IUW3 424 aaPredicted RBP12.11□□□□□ -0.47
PTPRK-221ENST00000532331 CCDC170Q8IYT3 715 aa12.11□□□□□ -0.47
PTPRK-221ENST00000532331 EHD4Q9H223 541 aa12.11□□□□□ -0.47
PTPRK-221ENST00000532331 SAMSN1Q9NSI8 373 aaKnown RBP12.11□□□□□ -0.47
PTPRK-221ENST00000532331 PPLO60437 1756 aa12.11□□□□□ -0.47
PTPRK-221ENST00000532331 VCAM1P19320 739 aa12.11□□□□□ -0.47
PTPRK-221ENST00000532331 PCK1P35558 622 aa12.11□□□□□ -0.47
PTPRK-221ENST00000532331 PRPF31Q8WWY3 499 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms