RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-222	ENST00000531967	RILPL2	Q969X0	211 aa		5.82	□□□□□ -1.48
ECHDC1-222	ENST00000531967	SLC6A18	Q96N87	628 aa		5.82	□□□□□ -1.48
ECHDC1-222	ENST00000531967	GSDMA	Q96QA5	445 aa		5.82	□□□□□ -1.48
ECHDC1-222	ENST00000531967	DNAJC28	Q9NX36	388 aa		5.82	□□□□□ -1.48
ECHDC1-222	ENST00000531967	PCDHGB4	Q9UN71	923 aa		5.82	□□□□□ -1.48
ECHDC1-222	ENST00000531967		A0A0B4J203	849 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	hCG_1807616	A0A1W2PRN6	198 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	LRRC14B	A6NHZ5	514 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	AKR1B15	C9JRZ8	316 aa	Predicted RBP	5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	APOL1	O14791	398 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	CAPN9	O14815	690 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	SGTA	O43765	313 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	MMP20	O60882	483 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	NDUFS2	O75306	463 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	ZSCAN22	P10073	491 aa	Predicted RBP	5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	CREM	Q03060	361 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	TYRO3	Q06418	890 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	PTK2B	Q14289	1009 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	ANKRD1	Q15327	319 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	DLGAP5	Q15398	846 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	TMEM177	Q53S58	311 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	WDR44	Q5JSH3	913 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	WIPI1	Q5MNZ9	446 aa	Predicted RBP	5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	SCARA3	Q6AZY7	606 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	FIP1L1	Q6UN15	594 aa	Known RBP	5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	ADAT2	Q7Z6V5	191 aa	Known RBP	5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	MTDH	Q86UE4	582 aa	Known RBP	5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	TRIM59	Q8IWR1	403 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	OR10H5	Q8NGA6	315 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	SSH1	Q8WYL5	1049 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	ZNF75CP	Q92670	426 aa	Predicted RBP	5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	C18orf8	Q96DM3	657 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	CGRRF1	Q99675	332 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	TEX13B	Q9BXU2	312 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	UTP6	Q9NYH9	597 aa	Known RBP	5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	TUBD1	Q9UJT1	453 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	PCOLCE2	Q9UKZ9	415 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	ARHGAP26	Q9UNA1	814 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	TRIM33	Q9UPN9	1127 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	VPS9D1	Q9Y2B5	631 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	ATP23	Q9Y6H3	246 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	SLC22A3	O75751	556 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	ENDOD1	O94919	500 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	POTEJ	P0CG39	1038 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	ZNF865	P0CJ78	1059 aa	Predicted RBP	5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	MECOM	Q03112	1051 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	KCNB1	Q14721	858 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	KLHDC7A	Q5VTJ3	777 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	TAF3	Q5VWG9	929 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	BICDL1	Q6ZP65	573 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	ZNF765	Q7L2R6	523 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	TMEM192	Q8IY95	271 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	SPC24	Q8NBT2	197 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	ARHGEF2	Q92974	986 aa	Known RBP	5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	FAM210A	Q96ND0	272 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	KCNC2	Q96PR1	638 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	ORAI2	Q96SN7	254 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	MXD3	Q9BW11	206 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	EMILIN2	Q9BXX0	1053 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	STK33	Q9BYT3	514 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	PAIP1	Q9H074	479 aa	Known RBP	5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	RPAP3	Q9H6T3	665 aa	Predicted RBP	5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	NOC2L	Q9Y3T9	749 aa	Known RBP	5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	SNX8	Q9Y5X2	465 aa		5.81	□□□□□ -1.48
ECHDC1-222	ENST00000531967	MEN1	O00255	615 aa		5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	SGSM2	O43147	1006 aa		5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	KLHL41	O60662	606 aa		5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	SASH3	O75995	380 aa		5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	PC	P11498	1178 aa	Known RBP	5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	YBX3	P16989	372 aa	Known RBP eCLIP	5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	FGFR4	P22455	802 aa		5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	HOXD10	P28358	340 aa		5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	AUH	Q13825	339 aa	Known RBP	5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	WTAP	Q15007	396 aa		5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	PDCD1	Q15116	288 aa		5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	ATP2B3	Q16720	1220 aa		5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	C1orf141	Q5JVX7	400 aa		5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	COL13A1	Q5TAT6	717 aa	Predicted RBP	5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	SHQ1	Q6PI26	577 aa	Known RBP	5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	USP53	Q70EK8	1073 aa		5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	ZC3H7A	Q8IWR0	971 aa	Known RBP	5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	TMEM145	Q8NBT3	493 aa		5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	CEP70	Q8NHQ1	597 aa		5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	NXPE3	Q969Y0	559 aa		5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	COA7	Q96BR5	231 aa		5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	CDK15	Q96Q40	435 aa		5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	SLC2A13	Q96QE2	648 aa		5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	PDCL3	Q9H2J4	239 aa		5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	MS4A5	Q9H3V2	200 aa		5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	PNPLA8	Q9NP80	782 aa		5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	PAPOLB	Q9NRJ5	636 aa	Known RBP	5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	ANGPTL3	Q9Y5C1	460 aa		5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	DTNB	O60941	627 aa		5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	SOCS5	O75159	536 aa		5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	CKM	P06732	381 aa		5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	ADH1A	P07327	375 aa		5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	SRGAP2B	P0DMP2	458 aa		5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	CHM	P24386	653 aa		5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	PPP1R42	Q7Z4L9	355 aa		5.8	□□□□□ -1.48
ECHDC1-222	ENST00000531967	RALYL	Q86SE5	291 aa	Known RBP	5.8	□□□□□ -1.48

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