RNA–Protein interactions for RNA: ENST00000531558.1

PICALM-215, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-215	ENST00000531558	GPRC5C	Q9NQ84	441 aa		28.67	■■■□□ 2.18
PICALM-215	ENST00000531558	RGS18	Q9NS28	235 aa		28.67	■■■□□ 2.18
PICALM-215	ENST00000531558	C1orf112	Q9NSG2	853 aa		28.67	■■■□□ 2.18
PICALM-215	ENST00000531558	FBXO2	Q9UK22	296 aa	Predicted RBP	28.67	■■■□□ 2.18
PICALM-215	ENST00000531558	SLC26A4	O43511	780 aa		28.66	■■■□□ 2.18
PICALM-215	ENST00000531558	ARHGEF15	O94989	841 aa		28.66	■■■□□ 2.18
PICALM-215	ENST00000531558	GLRA2	P23416	452 aa		28.66	■■■□□ 2.18
PICALM-215	ENST00000531558	NASP	P49321	788 aa	Predicted RBP	28.66	■■■□□ 2.18
PICALM-215	ENST00000531558	GRB10	Q13322	594 aa		28.66	■■■□□ 2.18
PICALM-215	ENST00000531558	TFDP1	Q14186	410 aa		28.66	■■■□□ 2.18
PICALM-215	ENST00000531558	MAEA	Q7L5Y9	396 aa		28.66	■■■□□ 2.18
PICALM-215	ENST00000531558	NPAS4	Q8IUM7	802 aa		28.66	■■■□□ 2.18
PICALM-215	ENST00000531558	KCTD17	Q8N5Z5	321 aa		28.66	■■■□□ 2.18
PICALM-215	ENST00000531558	CDK5RAP3	Q96JB5	506 aa		28.66	■■■□□ 2.18
PICALM-215	ENST00000531558	ZNF396	Q96N95	335 aa	Predicted RBP	28.66	■■■□□ 2.18
PICALM-215	ENST00000531558	GUCD1	Q96NT3	240 aa		28.66	■■■□□ 2.18
PICALM-215	ENST00000531558	YME1L1	Q96TA2	773 aa		28.66	■■■□□ 2.18
PICALM-215	ENST00000531558	UBA7	P41226	1012 aa		28.65	■■■□□ 2.18
PICALM-215	ENST00000531558	PHKA2	P46019	1235 aa		28.65	■■■□□ 2.18
PICALM-215	ENST00000531558	SARS	P49591	514 aa	Known RBP	28.65	■■■□□ 2.18
PICALM-215	ENST00000531558	TAP1	Q03518	808 aa		28.65	■■■□□ 2.18
PICALM-215	ENST00000531558	CAPS	Q13938	189 aa		28.65	■■■□□ 2.18
PICALM-215	ENST00000531558	SLC39A14	Q15043	492 aa		28.65	■■■□□ 2.18
PICALM-215	ENST00000531558	TMEM119	Q4V9L6	283 aa		28.65	■■■□□ 2.18
PICALM-215	ENST00000531558	FAM102B	Q5T8I3	360 aa		28.65	■■■□□ 2.18
PICALM-215	ENST00000531558	SRGAP1	Q7Z6B7	1085 aa		28.65	■■■□□ 2.18
PICALM-215	ENST00000531558	CRIPAK	Q8N1N5	446 aa		28.65	■■■□□ 2.18
PICALM-215	ENST00000531558	SP7	Q8TDD2	431 aa	Predicted RBP	28.65	■■■□□ 2.18
PICALM-215	ENST00000531558	SRPRB	Q9Y5M8	271 aa	Known RBP	28.65	■■■□□ 2.18
PICALM-215	ENST00000531558	TTC3	P53804	2025 aa		28.65	■■■□□ 2.18
PICALM-215	ENST00000531558		C9IYK1	514 aa		28.64	■■■□□ 2.18
PICALM-215	ENST00000531558	SLC34A2	O95436	690 aa		28.64	■■■□□ 2.18
PICALM-215	ENST00000531558	ZSCAN20	P17040	1043 aa	Predicted RBP	28.64	■■■□□ 2.18
PICALM-215	ENST00000531558	GRIN2C	Q14957	1233 aa		28.64	■■■□□ 2.18
PICALM-215	ENST00000531558	SLC24A5	Q71RS6	500 aa		28.64	■■■□□ 2.18
PICALM-215	ENST00000531558	CSRNP2	Q9H175	543 aa		28.64	■■■□□ 2.18
PICALM-215	ENST00000531558	MINDY3	Q9H8M7	445 aa		28.64	■■■□□ 2.18
PICALM-215	ENST00000531558	COL4A6	Q14031	1691 aa		28.64	■■■□□ 2.17
PICALM-215	ENST00000531558	STAG3L1	P0CL83	205 aa		28.63	■■■□□ 2.17
PICALM-215	ENST00000531558	PTEN	P60484	403 aa		28.63	■■■□□ 2.17
PICALM-215	ENST00000531558	POU5F1B	Q06416	359 aa		28.63	■■■□□ 2.17
PICALM-215	ENST00000531558	CATSPER4	Q7RTX7	472 aa		28.63	■■■□□ 2.17
PICALM-215	ENST00000531558	IFNLR1	Q8IU57	520 aa	Predicted RBP	28.63	■■■□□ 2.17
PICALM-215	ENST00000531558	PLIN2	Q99541	437 aa		28.63	■■■□□ 2.17
PICALM-215	ENST00000531558	RC3H2	Q9HBD1	1191 aa	Known RBP	28.63	■■■□□ 2.17
PICALM-215	ENST00000531558	LINC01553	A4QN01	128 aa		28.62	■■■□□ 2.17
PICALM-215	ENST00000531558	CALML4	Q96GE6	196 aa		28.62	■■■□□ 2.17
PICALM-215	ENST00000531558	CDX2	Q99626	313 aa	Predicted RBP	28.62	■■■□□ 2.17
PICALM-215	ENST00000531558	NFKBIZ	Q9BYH8	718 aa		28.62	■■■□□ 2.17
PICALM-215	ENST00000531558	CHST12	Q9NRB3	414 aa		28.62	■■■□□ 2.17
PICALM-215	ENST00000531558	IBSP	P21815	317 aa	Predicted RBP	28.61	■■■□□ 2.17
PICALM-215	ENST00000531558	FAM189B	P81408	668 aa		28.61	■■■□□ 2.17
PICALM-215	ENST00000531558	STK38	Q15208	465 aa		28.61	■■■□□ 2.17
PICALM-215	ENST00000531558	LINC00301	Q8NCQ3	95 aa		28.61	■■■□□ 2.17
PICALM-215	ENST00000531558	RUSC1	Q9BVN2	902 aa		28.61	■■■□□ 2.17
PICALM-215	ENST00000531558	RNF216	Q9NWF9	866 aa	Predicted RBP	28.61	■■■□□ 2.17
PICALM-215	ENST00000531558	LRFN2	Q9ULH4	789 aa		28.61	■■■□□ 2.17
PICALM-215	ENST00000531558	MYH15	Q9Y2K3	1946 aa		28.61	■■■□□ 2.17
PICALM-215	ENST00000531558	DGKI	O75912	1065 aa		28.6	■■■□□ 2.17
PICALM-215	ENST00000531558	BRD1	O95696	1058 aa		28.6	■■■□□ 2.17
PICALM-215	ENST00000531558	KARS	Q15046	597 aa	Known RBP	28.6	■■■□□ 2.17
PICALM-215	ENST00000531558	KRI1	Q8N9T8	703 aa	Known RBP	28.6	■■■□□ 2.17
PICALM-215	ENST00000531558	CLIC6	Q96NY7	704 aa		28.6	■■■□□ 2.17
PICALM-215	ENST00000531558	CCSER1	Q9C0I3	900 aa		28.6	■■■□□ 2.17
PICALM-215	ENST00000531558	AGPAT5	Q9NUQ2	364 aa		28.6	■■■□□ 2.17
PICALM-215	ENST00000531558	DACT1	Q9NYF0	836 aa		28.6	■■■□□ 2.17
PICALM-215	ENST00000531558	TFIP11	Q9UBB9	837 aa	Known RBP	28.6	■■■□□ 2.17
PICALM-215	ENST00000531558	PIN4	Q9Y237	131 aa	Known RBP	28.6	■■■□□ 2.17
PICALM-215	ENST00000531558	PCDHB7	Q9Y5E2	793 aa		28.6	■■■□□ 2.17
PICALM-215	ENST00000531558	ADGRA3	Q8IWK6	1321 aa		28.6	■■■□□ 2.17
PICALM-215	ENST00000531558	YEATS4	O95619	227 aa		28.59	■■■□□ 2.17
PICALM-215	ENST00000531558	PCBP1	Q15365	356 aa	Known RBP eCLIP	28.59	■■■□□ 2.17	3e-6	■■□□□ 13
PICALM-215	ENST00000531558	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	28.59	■■■□□ 2.17
PICALM-215	ENST00000531558	SPECC1	Q5M775	1068 aa		28.59	■■■□□ 2.17
PICALM-215	ENST00000531558	RINT1	Q6NUQ1	792 aa		28.59	■■■□□ 2.17
PICALM-215	ENST00000531558	FOXD4L3	Q6VB84	417 aa	Predicted RBP	28.59	■■■□□ 2.17
PICALM-215	ENST00000531558	SPRED2	Q7Z698	418 aa		28.59	■■■□□ 2.17
PICALM-215	ENST00000531558	SYT2	Q8N9I0	419 aa	Predicted RBP	28.59	■■■□□ 2.17
PICALM-215	ENST00000531558	RASSF8	Q8NHQ8	419 aa		28.59	■■■□□ 2.17
PICALM-215	ENST00000531558	BSND	Q8WZ55	320 aa		28.59	■■■□□ 2.17
PICALM-215	ENST00000531558	KIFAP3	Q92845	792 aa		28.59	■■■□□ 2.17
PICALM-215	ENST00000531558	ZNF689	Q96CS4	500 aa	Predicted RBP	28.59	■■■□□ 2.17
PICALM-215	ENST00000531558	EPSTI1	Q96J88	318 aa		28.59	■■■□□ 2.17
PICALM-215	ENST00000531558	PRDM12	Q9H4Q4	367 aa		28.59	■■■□□ 2.17
PICALM-215	ENST00000531558	ELAC1	Q9H777	363 aa	Known RBP	28.59	■■■□□ 2.17
PICALM-215	ENST00000531558	TMEM161A	Q9NX61	479 aa		28.59	■■■□□ 2.17
PICALM-215	ENST00000531558	LRRIQ4	A6NIV6	560 aa		28.58	■■■□□ 2.17
PICALM-215	ENST00000531558	INO80B-WBP1	J3KQ70	363 aa		28.58	■■■□□ 2.17
PICALM-215	ENST00000531558	SSB	P05455	408 aa	Known RBP eCLIP	28.58	■■■□□ 2.17
PICALM-215	ENST00000531558	PLA2G4B	P0C869	781 aa		28.58	■■■□□ 2.17
PICALM-215	ENST00000531558	PLCG1	P19174	1290 aa		28.58	■■■□□ 2.17
PICALM-215	ENST00000531558	MBTD1	Q05BQ5	628 aa		28.58	■■■□□ 2.17
PICALM-215	ENST00000531558	CDCA2	Q69YH5	1023 aa	Predicted RBP	28.58	■■■□□ 2.17
PICALM-215	ENST00000531558	C1orf186	Q6ZWK4	172 aa		28.58	■■■□□ 2.17
PICALM-215	ENST00000531558	USP49	Q70CQ1	688 aa		28.58	■■■□□ 2.17
PICALM-215	ENST00000531558	MYLIP	Q8WY64	445 aa		28.58	■■■□□ 2.17
PICALM-215	ENST00000531558	SYMPK	Q92797	1274 aa	Known RBP	28.58	■■■□□ 2.17
PICALM-215	ENST00000531558	TGS1	Q96RS0	853 aa	Known RBP	28.58	■■■□□ 2.17
PICALM-215	ENST00000531558	CERS4	Q9HA82	394 aa		28.58	■■■□□ 2.17
PICALM-215	ENST00000531558	SPTLC2	O15270	562 aa		28.57	■■■□□ 2.16

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